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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom10g15890 |
| rosa_chinensis | RchiOBHm_Chr3g0470731 RchiOBHm_Chr4g0408941 |
| rosa_laevigata | RLG00000001472 RLG00000030161 RLG00000031888 |
| rosa_multiflora | Rmu_sc0000015.1_g000031 |
| rosa_roxburghii | Rroxscaffold_1G00027960 Rroxscaffold_1G00031510 Rroxscaffold_2G00110560 Rroxscaffold_2G00147590 Rroxscaffold_5G00346410 Rroxscaffold_5G00353150 Rroxscaffold_7G00186110 Rroxscaffold_7G00198750 |
| rosa_samantha | Rh2DG222400 Rh3AG217100 Rh4AG125600 Rh4CG133700 Rh5AG093100 Rh7BG297300 Rh7CG251100 Rh7DG410000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 144, 303 |
| AclWI | GGATC | 1 cut(s) | 262 |
| AgsI | TTSAA | 2 cut(s) | 223, 264 |
| AluBI | AGCT | 3 cut(s) | 96, 129, 293 |
| AluI | AGCT | 3 cut(s) | 96, 129, 293 |
| Alw21I | GWGCWC | 1 cut(s) | 91 |
| Alw44I | GTGCAC | 1 cut(s) | 87 |
| AlwI | GGATC | 1 cut(s) | 262 |
| AoxI | GGCC | 2 cut(s) | 3, 307 |
| ApaLI | GTGCAC | 1 cut(s) | 87 |
| ApeKI | GCWGC | 1 cut(s) | 24 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 202, 234 |
| AspS9I | GGNCC | 1 cut(s) | 307 |
| AsuHPI | GGTGA | 1 cut(s) | 219 |
| AsuII | TTCGAA | 1 cut(s) | 197 |
| BaeGI | GKGCMC | 1 cut(s) | 91 |
| BauI | CACGAG | 1 cut(s) | 84 |
| BbsI | GAAGAC | 2 cut(s) | 179, 215 |
| Bbv12I | GWGCWC | 1 cut(s) | 91 |
| BbvI | GCAGC | 1 cut(s) | 36 |
| BccI | CCATC | 1 cut(s) | 245 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 136, 170 |
| BisI | GCNGC | 2 cut(s) | 25, 145 |
| BlsI | GCNGC | 2 cut(s) | 26, 146 |
| BmgT120I | GGNCC | 1 cut(s) | 307 |
| BmiI | GGNNCC | 1 cut(s) | 308 |
| BmsI | GCATC | 2 cut(s) | 156, 173 |
| BpiI | GAAGAC | 2 cut(s) | 179, 215 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 67, 99 |
| BpmI | CTGGAG | 1 cut(s) | 145 |
| Bpu14I | TTCGAA | 1 cut(s) | 197 |
| Bse3DI | GCAATG | 1 cut(s) | 118 |
| BseMI | GCAATG | 1 cut(s) | 118 |
| BseSI | GKGCMC | 1 cut(s) | 91 |
| BseXI | GCAGC | 1 cut(s) | 36 |
| BshFI | GGCC | 2 cut(s) | 5, 309 |
| BsiHKAI | GWGCWC | 1 cut(s) | 91 |
| BsnI | GGCC | 2 cut(s) | 5, 309 |
| Bsp119I | TTCGAA | 1 cut(s) | 197 |
| Bsp1286I | GDGCHC | 1 cut(s) | 91 |
| Bsp143I | GATC | 1 cut(s) | 254 |
| BspACI | CCGC | 2 cut(s) | 144, 303 |
| BspANI | GGCC | 2 cut(s) | 5, 309 |
| BspLI | GGNNCC | 1 cut(s) | 308 |
| BspPI | GGATC | 1 cut(s) | 262 |
| BspT104I | TTCGAA | 1 cut(s) | 197 |
| BsrDI | GCAATG | 1 cut(s) | 118 |
| BssMI | GATC | 1 cut(s) | 254 |
| BssSI | CACGAG | 1 cut(s) | 84 |
| Bst2BI | CACGAG | 1 cut(s) | 84 |
| BstBI | TTCGAA | 1 cut(s) | 197 |
| BstDEI | CTNAG | 2 cut(s) | 204, 213 |
| BstKTI | GATC | 1 cut(s) | 257 |
| BstMBI | GATC | 1 cut(s) | 254 |
| BstSLI | GKGCMC | 1 cut(s) | 91 |
| BstV1I | GCAGC | 1 cut(s) | 36 |
| BstV2I | GAAGAC | 2 cut(s) | 179, 215 |
| BstX2I | RGATCY | 1 cut(s) | 254 |
| BstYI | RGATCY | 1 cut(s) | 254 |
| BsuRI | GGCC | 2 cut(s) | 5, 309 |
| BtsI | GCAGTG | 1 cut(s) | 99 |
| BtsIMutI | CAGTG | 1 cut(s) | 99 |
| Cfr13I | GGNCC | 1 cut(s) | 307 |
| CviJI | RGCY | 7 cut(s) | 5, 27, 96, 129, 202, 293, 309 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 27, 96, 129, 202, 293, 309 |
| DdeI | CTNAG | 2 cut(s) | 204, 213 |
| DpnI | GATC | 1 cut(s) | 256 |
| DpnII | GATC | 1 cut(s) | 254 |
| EcoO109I | RGGNCCY | 1 cut(s) | 307 |
| FaiI | YATR | 1 cut(s) | 43 |
| FauI | CCCGC | 1 cut(s) | 296 |
| Fnu4HI | GCNGC | 2 cut(s) | 25, 145 |
| Fsp4HI | GCNGC | 2 cut(s) | 25, 145 |
| GluI | GCNGC | 2 cut(s) | 25, 145 |
| GsuI | CTGGAG | 1 cut(s) | 145 |
| HaeIII | GGCC | 2 cut(s) | 5, 309 |
| HinfI | GANTC | 2 cut(s) | 82, 296 |
| HphI | GGTGA | 1 cut(s) | 219 |
| Hpy166II | GTNNAC | 1 cut(s) | 89 |
| Hpy188I | TCNGA | 1 cut(s) | 250 |
| Hpy8I | GTNNAC | 1 cut(s) | 89 |
| HpyAV | CCTTC | 1 cut(s) | 262 |
| HpyCH4V | TGCA | 2 cut(s) | 89, 164 |
| HpyF3I | CTNAG | 2 cut(s) | 204, 213 |
| Kzo9I | GATC | 1 cut(s) | 254 |
| LmnI | GCTCC | 1 cut(s) | 126 |
| LpnPI | CCDG | 3 cut(s) | 32, 109, 115 |
| Lsp1109I | GCAGC | 1 cut(s) | 36 |
| LweI | GCATC | 2 cut(s) | 156, 173 |
| MaeIII | GTNAC | 1 cut(s) | 225 |
| MalI | GATC | 1 cut(s) | 256 |
| MboI | GATC | 1 cut(s) | 254 |
| MboII | GAAGA | 3 cut(s) | 71, 184, 220 |
| MflI | RGATCY | 1 cut(s) | 254 |
| MhlI | GDGCHC | 1 cut(s) | 91 |
| MluCI | AATT | 1 cut(s) | 33 |
| MlyI | GAGTC | 1 cut(s) | 76 |
| MmeI | TCCRAC | 1 cut(s) | 36 |
| MseI | TTAA | 1 cut(s) | 36 |
| NdeII | GATC | 1 cut(s) | 254 |
| NlaIV | GGNNCC | 1 cut(s) | 308 |
| NmuCI | GTSAC | 1 cut(s) | 225 |
| NspV | TTCGAA | 1 cut(s) | 197 |
| PfeI | GAWTC | 1 cut(s) | 296 |
| PflFI | GACNNNGTC | 2 cut(s) | 178, 214 |
| PkrI | GCNGC | 2 cut(s) | 26, 146 |
| PleI | GAGTC | 1 cut(s) | 76 |
| PpsI | GAGTC | 1 cut(s) | 76 |
| PspN4I | GGNNCC | 1 cut(s) | 308 |
| PspPI | GGNCC | 1 cut(s) | 307 |
| PsuI | RGATCY | 1 cut(s) | 254 |
| PsyI | GACNNNGTC | 2 cut(s) | 178, 214 |
| SaqAI | TTAA | 1 cut(s) | 36 |
| SatI | GCNGC | 2 cut(s) | 25, 145 |
| Sau3AI | GATC | 1 cut(s) | 254 |
| Sau96I | GGNCC | 1 cut(s) | 307 |
| SchI | GAGTC | 1 cut(s) | 76 |
| SduI | GDGCHC | 1 cut(s) | 91 |
| SetI | ASST | 3 cut(s) | 98, 131, 295 |
| SfaNI | GCATC | 2 cut(s) | 156, 173 |
| SfuI | TTCGAA | 1 cut(s) | 197 |
| Sse9I | AATT | 1 cut(s) | 33 |
| SsiI | CCGC | 2 cut(s) | 144, 303 |
| TaqI | TCGA | 2 cut(s) | 182, 197 |
| TasI | AATT | 1 cut(s) | 33 |
| TauI | GCSGC | 1 cut(s) | 147 |
| TfiI | GAWTC | 1 cut(s) | 296 |
| Tru1I | TTAA | 1 cut(s) | 36 |
| Tru9I | TTAA | 1 cut(s) | 36 |
| TscAI | CASTG | 1 cut(s) | 106 |
| TseFI | GTSAC | 1 cut(s) | 225 |
| TseI | GCWGC | 1 cut(s) | 24 |
| Tsp45I | GTSAC | 1 cut(s) | 225 |
| TspDTI | ATGAA | 1 cut(s) | 107 |
| TspRI | CASTG | 1 cut(s) | 106 |
| Tth111I | GACNNNGTC | 2 cut(s) | 178, 214 |
| VneI | GTGCAC | 1 cut(s) | 87 |