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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom10g15890 |
| rosa_chinensis | RchiOBHm_Chr3g0470731 RchiOBHm_Chr4g0408941 |
| rosa_laevigata | RLG00000001472 RLG00000030161 RLG00000031888 |
| rosa_multiflora | Rmu_sc0000015.1_g000031 |
| rosa_roxburghii | Rroxscaffold_1G00027960 Rroxscaffold_1G00031510 Rroxscaffold_2G00110560 Rroxscaffold_2G00147590 Rroxscaffold_5G00346410 Rroxscaffold_5G00353150 Rroxscaffold_7G00186110 Rroxscaffold_7G00198750 |
| rosa_samantha | Rh2DG222400 Rh3AG217100 Rh4AG125600 Rh4CG133700 Rh5AG093100 Rh7BG297300 Rh7CG251100 Rh7DG410000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 175, 196, 199 |
| AcoI | YGGCCR | 1 cut(s) | 124 |
| AcsI | RAATTY | 4 cut(s) | 19, 27, 109, 153 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 133 |
| AjiI | CACGTC | 1 cut(s) | 81 |
| AluBI | AGCT | 1 cut(s) | 117 |
| AluI | AGCT | 1 cut(s) | 117 |
| AoxI | GGCC | 3 cut(s) | 124, 145, 200 |
| ApeKI | GCWGC | 1 cut(s) | 52 |
| ApoI | RAATTY | 4 cut(s) | 19, 27, 109, 153 |
| BbsI | GAAGAC | 1 cut(s) | 75 |
| BbvI | GCAGC | 1 cut(s) | 39 |
| BccI | CCATC | 1 cut(s) | 116 |
| BfaI | CTAG | 2 cut(s) | 9, 92 |
| BfmI | CTRYAG | 1 cut(s) | 38 |
| BisI | GCNGC | 3 cut(s) | 53, 197, 200 |
| BlsI | GCNGC | 3 cut(s) | 54, 198, 201 |
| BmgBI | CACGTC | 1 cut(s) | 81 |
| BmsI | GCATC | 1 cut(s) | 83 |
| BpiI | GAAGAC | 1 cut(s) | 75 |
| BsaJI | CCNNGG | 2 cut(s) | 142, 206 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 133 |
| Bse118I | RCCGGY | 1 cut(s) | 147 |
| BseDI | CCNNGG | 2 cut(s) | 142, 206 |
| BseGI | GGATG | 1 cut(s) | 74 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 133 |
| BseXI | GCAGC | 1 cut(s) | 39 |
| BshFI | GGCC | 3 cut(s) | 126, 147, 202 |
| BsiSI | CCGG | 2 cut(s) | 127, 148 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 133 |
| BsnI | GGCC | 3 cut(s) | 126, 147, 202 |
| Bsp143I | GATC | 2 cut(s) | 32, 42 |
| BspACI | CCGC | 3 cut(s) | 175, 196, 199 |
| BspANI | GGCC | 3 cut(s) | 126, 147, 202 |
| BsrFI | RCCGGY | 1 cut(s) | 147 |
| BssAI | RCCGGY | 1 cut(s) | 147 |
| BssECI | CCNNGG | 2 cut(s) | 142, 206 |
| BssMI | GATC | 2 cut(s) | 32, 42 |
| BssT1I | CCWWGG | 1 cut(s) | 142 |
| Bst4CI | ACNGT | 1 cut(s) | 210 |
| BstC8I | GCNNGC | 1 cut(s) | 149 |
| BstDSI | CCRYGG | 1 cut(s) | 206 |
| BstF5I | GGATG | 1 cut(s) | 74 |
| BstKTI | GATC | 2 cut(s) | 35, 45 |
| BstMBI | GATC | 2 cut(s) | 32, 42 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 123, 167, 219 |
| BstSFI | CTRYAG | 1 cut(s) | 38 |
| BstV1I | GCAGC | 1 cut(s) | 39 |
| BstV2I | GAAGAC | 1 cut(s) | 75 |
| BsuRI | GGCC | 3 cut(s) | 126, 147, 202 |
| BtgI | CCRYGG | 1 cut(s) | 206 |
| BtrI | CACGTC | 1 cut(s) | 81 |
| BtsCI | GGATG | 1 cut(s) | 74 |
| Cac8I | GCNNGC | 1 cut(s) | 149 |
| Cfr10I | RCCGGY | 1 cut(s) | 147 |
| CviAII | CATG | 1 cut(s) | 219 |
| CviJI | RGCY | 6 cut(s) | 91, 117, 126, 147, 170, 202 |
| CviKI_1 | RGCY | 6 cut(s) | 91, 117, 126, 147, 170, 202 |
| DpnI | GATC | 2 cut(s) | 34, 44 |
| DpnII | GATC | 2 cut(s) | 32, 42 |
| EaeI | YGGCCR | 1 cut(s) | 124 |
| EciI | GGCGGA | 1 cut(s) | 190 |
| Eco130I | CCWWGG | 1 cut(s) | 142 |
| EcoRI | GAATTC | 1 cut(s) | 109 |
| EcoT14I | CCWWGG | 1 cut(s) | 142 |
| ErhI | CCWWGG | 1 cut(s) | 142 |
| FaeI | CATG | 1 cut(s) | 222 |
| FaiI | YATR | 2 cut(s) | 120, 220 |
| FatI | CATG | 1 cut(s) | 218 |
| Fnu4HI | GCNGC | 3 cut(s) | 53, 197, 200 |
| FokI | GGATG | 1 cut(s) | 61 |
| Fsp4HI | GCNGC | 3 cut(s) | 53, 197, 200 |
| FspBI | CTAG | 2 cut(s) | 9, 92 |
| GluI | GCNGC | 3 cut(s) | 53, 197, 200 |
| HaeIII | GGCC | 3 cut(s) | 126, 147, 202 |
| HapII | CCGG | 2 cut(s) | 127, 148 |
| Hin1II | CATG | 1 cut(s) | 222 |
| HinfI | GANTC | 1 cut(s) | 47 |
| HpaII | CCGG | 2 cut(s) | 127, 148 |
| HpyCH4III | ACNGT | 1 cut(s) | 210 |
| HpyCH4IV | ACGT | 1 cut(s) | 80 |
| HpyCH4V | TGCA | 1 cut(s) | 55 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 123, 167, 219 |
| HpySE526I | ACGT | 1 cut(s) | 80 |
| Hsp92II | CATG | 1 cut(s) | 222 |
| KroI | GCCGGC | 1 cut(s) | 147 |
| KroNI | GCCGGC | 1 cut(s) | 149 |
| Kzo9I | GATC | 2 cut(s) | 32, 42 |
| LpnPI | CCDG | 3 cut(s) | 72, 140, 161 |
| Lsp1109I | GCAGC | 1 cut(s) | 39 |
| LweI | GCATC | 1 cut(s) | 83 |
| MaeI | CTAG | 2 cut(s) | 9, 92 |
| MaeII | ACGT | 1 cut(s) | 80 |
| MaeIII | GTNAC | 1 cut(s) | 179 |
| MalI | GATC | 2 cut(s) | 34, 44 |
| MboI | GATC | 2 cut(s) | 32, 42 |
| MboII | GAAGA | 1 cut(s) | 75 |
| MluCI | AATT | 4 cut(s) | 19, 27, 109, 153 |
| MnlI | CCTC | 4 cut(s) | 52, 60, 112, 213 |
| MroNI | GCCGGC | 1 cut(s) | 147 |
| MspI | CCGG | 2 cut(s) | 127, 148 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 123, 167, 219 |
| NaeI | GCCGGC | 1 cut(s) | 149 |
| NdeII | GATC | 2 cut(s) | 32, 42 |
| NgoMIV | GCCGGC | 1 cut(s) | 147 |
| NlaIII | CATG | 1 cut(s) | 222 |
| NmeAIII | GCCGAG | 1 cut(s) | 151 |
| PdiI | GCCGGC | 1 cut(s) | 149 |
| PfeI | GAWTC | 1 cut(s) | 47 |
| PkrI | GCNGC | 3 cut(s) | 54, 198, 201 |
| SatI | GCNGC | 3 cut(s) | 53, 197, 200 |
| Sau3AI | GATC | 2 cut(s) | 32, 42 |
| SetI | ASST | 3 cut(s) | 63, 83, 119 |
| SfaNI | GCATC | 1 cut(s) | 83 |
| SfcI | CTRYAG | 1 cut(s) | 38 |
| Sse9I | AATT | 4 cut(s) | 19, 27, 109, 153 |
| SsiI | CCGC | 3 cut(s) | 175, 196, 199 |
| SspMI | CTAG | 2 cut(s) | 9, 92 |
| StyI | CCWWGG | 1 cut(s) | 142 |
| TaaI | ACNGT | 1 cut(s) | 210 |
| TaiI | ACGT | 1 cut(s) | 83 |
| TaqI | TCGA | 3 cut(s) | 31, 45, 113 |
| TasI | AATT | 4 cut(s) | 19, 27, 109, 153 |
| TauI | GCSGC | 2 cut(s) | 199, 202 |
| TfiI | GAWTC | 1 cut(s) | 47 |
| TseI | GCWGC | 1 cut(s) | 52 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XapI | RAATTY | 4 cut(s) | 19, 27, 109, 153 |
| XspI | CTAG | 2 cut(s) | 9, 92 |