Cytochrome p450
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom10g15890 |
| rosa_chinensis | RchiOBHm_Chr3g0470731 RchiOBHm_Chr4g0408941 |
| rosa_laevigata | RLG00000001472 RLG00000030161 RLG00000031888 |
| rosa_multiflora | Rmu_sc0000015.1_g000031 |
| rosa_roxburghii | Rroxscaffold_1G00027960 Rroxscaffold_1G00031510 Rroxscaffold_2G00110560 Rroxscaffold_2G00147590 Rroxscaffold_5G00346410 Rroxscaffold_5G00353150 Rroxscaffold_7G00186110 Rroxscaffold_7G00198750 |
| rosa_samantha | Rh2DG222400 Rh3AG217100 Rh4AG125600 Rh4CG133700 Rh5AG093100 Rh7BG297300 Rh7CG251100 Rh7DG410000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 18 |
| AciI | CCGC | 1 cut(s) | 63 |
| AclWI | GGATC | 4 cut(s) | 60, 73, 86, 285 |
| AcsI | RAATTY | 2 cut(s) | 37, 155 |
| AgsI | TTSAA | 1 cut(s) | 259 |
| AhlI | ACTAGT | 1 cut(s) | 271 |
| AluBI | AGCT | 3 cut(s) | 19, 103, 206 |
| AluI | AGCT | 3 cut(s) | 19, 103, 206 |
| AlwI | GGATC | 4 cut(s) | 60, 73, 86, 285 |
| Ama87I | CYCGRG | 2 cut(s) | 20, 242 |
| ApeKI | GCWGC | 2 cut(s) | 13, 16 |
| ApoI | RAATTY | 2 cut(s) | 37, 155 |
| AvaI | CYCGRG | 2 cut(s) | 20, 242 |
| BamHI | GGATCC | 1 cut(s) | 65 |
| BbsI | GAAGAC | 1 cut(s) | 240 |
| BbvI | GCAGC | 2 cut(s) | 25, 28 |
| BceAI | ACGGC | 1 cut(s) | 76 |
| BcuI | ACTAGT | 1 cut(s) | 271 |
| BfaI | CTAG | 1 cut(s) | 272 |
| BfmI | CTRYAG | 1 cut(s) | 11 |
| BfuAI | ACCTGC | 1 cut(s) | 18 |
| BisI | GCNGC | 2 cut(s) | 14, 17 |
| BlsI | GCNGC | 2 cut(s) | 15, 18 |
| BmeT110I | CYCGRG | 2 cut(s) | 20, 242 |
| BmiI | GGNNCC | 1 cut(s) | 67 |
| BpiI | GAAGAC | 1 cut(s) | 240 |
| BsaJI | CCNNGG | 1 cut(s) | 288 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 66, 96, 258, 288 |
| BseDI | CCNNGG | 1 cut(s) | 288 |
| BseXI | GCAGC | 2 cut(s) | 25, 28 |
| BsiHKCI | CYCGRG | 2 cut(s) | 20, 242 |
| BsmI | GAATGC | 1 cut(s) | 254 |
| BsoBI | CYCGRG | 2 cut(s) | 20, 242 |
| Bsp143I | GATC | 3 cut(s) | 65, 91, 277 |
| BspACI | CCGC | 1 cut(s) | 63 |
| BspHI | TCATGA | 1 cut(s) | 198 |
| BspLI | GGNNCC | 1 cut(s) | 67 |
| BspMAI | CTGCAG | 1 cut(s) | 15 |
| BspMI | ACCTGC | 1 cut(s) | 18 |
| BspPI | GGATC | 4 cut(s) | 60, 73, 86, 285 |
| BssECI | CCNNGG | 1 cut(s) | 288 |
| BssMI | GATC | 3 cut(s) | 65, 91, 277 |
| Bst4CI | ACNGT | 1 cut(s) | 89 |
| BstKTI | GATC | 3 cut(s) | 68, 94, 280 |
| BstMBI | GATC | 3 cut(s) | 65, 91, 277 |
| BstSFI | CTRYAG | 1 cut(s) | 11 |
| BstV1I | GCAGC | 2 cut(s) | 25, 28 |
| BstV2I | GAAGAC | 1 cut(s) | 240 |
| BstX2I | RGATCY | 1 cut(s) | 65 |
| BstYI | RGATCY | 1 cut(s) | 65 |
| BveI | ACCTGC | 1 cut(s) | 18 |
| CciI | TCATGA | 1 cut(s) | 198 |
| CviAII | CATG | 1 cut(s) | 199 |
| CviJI | RGCY | 3 cut(s) | 19, 103, 206 |
| CviKI_1 | RGCY | 3 cut(s) | 19, 103, 206 |
| DpnI | GATC | 3 cut(s) | 67, 93, 279 |
| DpnII | GATC | 3 cut(s) | 65, 91, 277 |
| EciI | GGCGGA | 1 cut(s) | 78 |
| Eco88I | CYCGRG | 2 cut(s) | 20, 242 |
| FaeI | CATG | 1 cut(s) | 202 |
| FaiI | YATR | 4 cut(s) | 107, 144, 200, 210 |
| FatI | CATG | 1 cut(s) | 198 |
| Fnu4HI | GCNGC | 2 cut(s) | 14, 17 |
| Fsp4HI | GCNGC | 2 cut(s) | 14, 17 |
| FspBI | CTAG | 1 cut(s) | 272 |
| GluI | GCNGC | 2 cut(s) | 14, 17 |
| Hin1II | CATG | 1 cut(s) | 202 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 1 cut(s) | 121 |
| Hpy188I | TCNGA | 1 cut(s) | 289 |
| Hpy188III | TCNNGA | 6 cut(s) | 22, 137, 199, 242, 244, 297 |
| Hpy99I | CGWCG | 1 cut(s) | 100 |
| HpyAV | CCTTC | 1 cut(s) | 257 |
| HpyCH4III | ACNGT | 1 cut(s) | 89 |
| HpyCH4V | TGCA | 1 cut(s) | 13 |
| Hsp92II | CATG | 1 cut(s) | 202 |
| Kzo9I | GATC | 3 cut(s) | 65, 91, 277 |
| LmnI | GCTCC | 1 cut(s) | 290 |
| LpnPI | CCDG | 1 cut(s) | 23 |
| Lsp1109I | GCAGC | 2 cut(s) | 25, 28 |
| MaeI | CTAG | 1 cut(s) | 272 |
| MalI | GATC | 3 cut(s) | 67, 93, 279 |
| MboI | GATC | 3 cut(s) | 65, 91, 277 |
| MboII | GAAGA | 1 cut(s) | 245 |
| MflI | RGATCY | 1 cut(s) | 65 |
| MluCI | AATT | 4 cut(s) | 37, 53, 126, 155 |
| MnlI | CCTC | 3 cut(s) | 144, 249, 283 |
| MseI | TTAA | 2 cut(s) | 78, 162 |
| Mva1269I | GAATGC | 1 cut(s) | 254 |
| NdeII | GATC | 3 cut(s) | 65, 91, 277 |
| NlaIII | CATG | 1 cut(s) | 202 |
| NlaIV | GGNNCC | 1 cut(s) | 67 |
| PaeR7I | CTCGAG | 1 cut(s) | 242 |
| PagI | TCATGA | 1 cut(s) | 198 |
| PctI | GAATGC | 1 cut(s) | 254 |
| PfeI | GAWTC | 1 cut(s) | 121 |
| PkrI | GCNGC | 2 cut(s) | 15, 18 |
| PspN4I | GGNNCC | 1 cut(s) | 67 |
| PstI | CTGCAG | 1 cut(s) | 15 |
| PsuI | RGATCY | 1 cut(s) | 65 |
| SaqAI | TTAA | 2 cut(s) | 78, 162 |
| SatI | GCNGC | 2 cut(s) | 14, 17 |
| Sau3AI | GATC | 3 cut(s) | 65, 91, 277 |
| SetI | ASST | 6 cut(s) | 12, 21, 105, 118, 136, 208 |
| SfcI | CTRYAG | 1 cut(s) | 11 |
| Sfr274I | CTCGAG | 1 cut(s) | 242 |
| SlaI | CTCGAG | 1 cut(s) | 242 |
| SmlI | CTYRAG | 1 cut(s) | 242 |
| SmoI | CTYRAG | 1 cut(s) | 242 |
| SpeI | ACTAGT | 1 cut(s) | 271 |
| Sse9I | AATT | 4 cut(s) | 37, 53, 126, 155 |
| SsiI | CCGC | 1 cut(s) | 63 |
| SspMI | CTAG | 1 cut(s) | 272 |
| TaaI | ACNGT | 1 cut(s) | 89 |
| TaqI | TCGA | 3 cut(s) | 98, 138, 243 |
| TasI | AATT | 4 cut(s) | 37, 53, 126, 155 |
| TfiI | GAWTC | 1 cut(s) | 121 |
| Tru1I | TTAA | 2 cut(s) | 78, 162 |
| Tru9I | TTAA | 2 cut(s) | 78, 162 |
| TseI | GCWGC | 2 cut(s) | 13, 16 |
| TspDTI | ATGAA | 3 cut(s) | 17, 187, 276 |
| TspGWI | ACGGA | 1 cut(s) | 84 |
| XapI | RAATTY | 2 cut(s) | 37, 155 |
| XhoI | CTCGAG | 1 cut(s) | 242 |
| XspI | CTAG | 1 cut(s) | 272 |