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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom10g15890 |
| rosa_chinensis | RchiOBHm_Chr3g0470731 RchiOBHm_Chr4g0408941 |
| rosa_laevigata | RLG00000001472 RLG00000030161 RLG00000031888 |
| rosa_multiflora | Rmu_sc0000015.1_g000031 |
| rosa_roxburghii | Rroxscaffold_1G00027960 Rroxscaffold_1G00031510 Rroxscaffold_2G00110560 Rroxscaffold_2G00147590 Rroxscaffold_5G00346410 Rroxscaffold_5G00353150 Rroxscaffold_7G00186110 Rroxscaffold_7G00198750 |
| rosa_samantha | Rh2DG222400 Rh3AG217100 Rh4AG125600 Rh4CG133700 Rh5AG093100 Rh7BG297300 Rh7CG251100 Rh7DG410000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 24 |
| AciI | CCGC | 1 cut(s) | 391 |
| AcoI | YGGCCR | 1 cut(s) | 252 |
| AcsI | RAATTY | 1 cut(s) | 380 |
| AfaI | GTAC | 1 cut(s) | 124 |
| AgsI | TTSAA | 3 cut(s) | 45, 166, 185 |
| AluBI | AGCT | 4 cut(s) | 20, 328, 459, 492 |
| AluI | AGCT | 4 cut(s) | 20, 328, 459, 492 |
| Alw21I | GWGCWC | 2 cut(s) | 250, 454 |
| Alw44I | GTGCAC | 1 cut(s) | 450 |
| AoxI | GGCC | 1 cut(s) | 252 |
| ApaLI | GTGCAC | 1 cut(s) | 450 |
| ApoI | RAATTY | 1 cut(s) | 380 |
| AseI | ATTAAT | 1 cut(s) | 240 |
| AspS9I | GGNCC | 1 cut(s) | 175 |
| AvaII | GGWCC | 1 cut(s) | 175 |
| BaeGI | GKGCMC | 1 cut(s) | 454 |
| BauI | CACGAG | 1 cut(s) | 447 |
| Bbv12I | GWGCWC | 2 cut(s) | 250, 454 |
| BceAI | ACGGC | 1 cut(s) | 300 |
| BfaI | CTAG | 1 cut(s) | 120 |
| BfmI | CTRYAG | 2 cut(s) | 267, 430 |
| BglII | AGATCT | 2 cut(s) | 149, 198 |
| BisI | GCNGC | 1 cut(s) | 391 |
| BlsI | GCNGC | 1 cut(s) | 392 |
| BmcAI | AGTACT | 1 cut(s) | 124 |
| Bme18I | GGWCC | 1 cut(s) | 175 |
| BmgT120I | GGNCC | 1 cut(s) | 175 |
| BmiI | GGNNCC | 2 cut(s) | 177, 507 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 185, 217, 430, 462 |
| BpmI | CTGGAG | 1 cut(s) | 508 |
| BsaWI | WCCGGW | 1 cut(s) | 296 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 291, 321 |
| Bse3DI | GCAATG | 1 cut(s) | 481 |
| BseMI | GCAATG | 1 cut(s) | 481 |
| BseRI | GAGGAG | 1 cut(s) | 518 |
| BseSI | GKGCMC | 1 cut(s) | 454 |
| BsgI | GTGCAG | 1 cut(s) | 546 |
| BshFI | GGCC | 1 cut(s) | 254 |
| BsiHKAI | GWGCWC | 2 cut(s) | 250, 454 |
| BsiSI | CCGG | 2 cut(s) | 251, 297 |
| BsmI | GAATGC | 1 cut(s) | 40 |
| BsnI | GGCC | 1 cut(s) | 254 |
| Bsp1286I | GDGCHC | 2 cut(s) | 250, 454 |
| Bsp143I | GATC | 4 cut(s) | 78, 149, 198, 316 |
| BspACI | CCGC | 1 cut(s) | 391 |
| BspANI | GGCC | 1 cut(s) | 254 |
| BspLI | GGNNCC | 2 cut(s) | 177, 507 |
| BsrDI | GCAATG | 1 cut(s) | 481 |
| BssMI | GATC | 4 cut(s) | 78, 149, 198, 316 |
| BssSI | CACGAG | 1 cut(s) | 447 |
| Bst2BI | CACGAG | 1 cut(s) | 447 |
| Bst4CI | ACNGT | 1 cut(s) | 314 |
| BstC8I | GCNNGC | 1 cut(s) | 525 |
| BstKTI | GATC | 4 cut(s) | 81, 152, 201, 319 |
| BstMBI | GATC | 4 cut(s) | 78, 149, 198, 316 |
| BstNSI | RCATGY | 1 cut(s) | 77 |
| BstSFI | CTRYAG | 2 cut(s) | 267, 430 |
| BstSLI | GKGCMC | 1 cut(s) | 454 |
| BstX2I | RGATCY | 2 cut(s) | 149, 198 |
| BstYI | RGATCY | 2 cut(s) | 149, 198 |
| BsuRI | GGCC | 1 cut(s) | 254 |
| BtsI | GCAGTG | 1 cut(s) | 462 |
| BtsIMutI | CAGTG | 1 cut(s) | 462 |
| Cac8I | GCNNGC | 1 cut(s) | 525 |
| Cfr13I | GGNCC | 1 cut(s) | 175 |
| Csp6I | GTAC | 1 cut(s) | 123 |
| CviAII | CATG | 4 cut(s) | 37, 74, 88, 145 |
| CviJI | RGCY | 8 cut(s) | 20, 59, 254, 328, 390, 459, 492, 508 |
| CviKI_1 | RGCY | 8 cut(s) | 20, 59, 254, 328, 390, 459, 492, 508 |
| CviQI | GTAC | 1 cut(s) | 123 |
| DpnI | GATC | 4 cut(s) | 80, 151, 200, 318 |
| DpnII | GATC | 4 cut(s) | 78, 149, 198, 316 |
| EaeI | YGGCCR | 1 cut(s) | 252 |
| Eco47I | GGWCC | 1 cut(s) | 175 |
| EcoO109I | RGGNCCY | 1 cut(s) | 175 |
| EcoT22I | ATGCAT | 1 cut(s) | 42 |
| FaeI | CATG | 4 cut(s) | 40, 77, 91, 148 |
| FatI | CATG | 4 cut(s) | 36, 73, 87, 144 |
| Fnu4HI | GCNGC | 1 cut(s) | 391 |
| Fsp4HI | GCNGC | 1 cut(s) | 391 |
| FspBI | CTAG | 1 cut(s) | 120 |
| GluI | GCNGC | 1 cut(s) | 391 |
| GsuI | CTGGAG | 1 cut(s) | 508 |
| HaeIII | GGCC | 1 cut(s) | 254 |
| HapII | CCGG | 2 cut(s) | 251, 297 |
| Hin1II | CATG | 4 cut(s) | 40, 77, 91, 148 |
| HindIII | AAGCTT | 1 cut(s) | 326 |
| HinfI | GANTC | 3 cut(s) | 289, 346, 445 |
| HpaII | CCGG | 2 cut(s) | 251, 297 |
| Hpy166II | GTNNAC | 1 cut(s) | 452 |
| Hpy188III | TCNNGA | 2 cut(s) | 157, 166 |
| Hpy8I | GTNNAC | 1 cut(s) | 452 |
| HpyCH4III | ACNGT | 1 cut(s) | 314 |
| HpyCH4V | TGCA | 3 cut(s) | 40, 452, 527 |
| Hsp92II | CATG | 4 cut(s) | 40, 77, 91, 148 |
| Kzo9I | GATC | 4 cut(s) | 78, 149, 198, 316 |
| LmnI | GCTCC | 3 cut(s) | 253, 489, 505 |
| LpnPI | CCDG | 7 cut(s) | 30, 264, 310, 395, 472, 478, 513 |
| MaeI | CTAG | 1 cut(s) | 120 |
| MaeIII | GTNAC | 1 cut(s) | 228 |
| MalI | GATC | 4 cut(s) | 80, 151, 200, 318 |
| MboI | GATC | 4 cut(s) | 78, 149, 198, 316 |
| MboII | GAAGA | 1 cut(s) | 434 |
| MflI | RGATCY | 2 cut(s) | 149, 198 |
| MhlI | GDGCHC | 2 cut(s) | 250, 454 |
| MluCI | AATT | 3 cut(s) | 351, 380, 396 |
| MlyI | GAGTC | 1 cut(s) | 439 |
| MmeI | TCCRAC | 1 cut(s) | 399 |
| MnlI | CCTC | 5 cut(s) | 317, 369, 496, 529, 544 |
| Mph1103I | ATGCAT | 1 cut(s) | 42 |
| MseI | TTAA | 2 cut(s) | 240, 399 |
| MslI | CAYNNNNRTG | 1 cut(s) | 86 |
| MspI | CCGG | 2 cut(s) | 251, 297 |
| Mva1269I | GAATGC | 1 cut(s) | 40 |
| NdeII | GATC | 4 cut(s) | 78, 149, 198, 316 |
| NlaIII | CATG | 4 cut(s) | 40, 77, 91, 148 |
| NlaIV | GGNNCC | 2 cut(s) | 177, 507 |
| NmuCI | GTSAC | 1 cut(s) | 228 |
| NsiI | ATGCAT | 1 cut(s) | 42 |
| NspI | RCATGY | 1 cut(s) | 77 |
| PctI | GAATGC | 1 cut(s) | 40 |
| PfeI | GAWTC | 2 cut(s) | 289, 346 |
| PkrI | GCNGC | 1 cut(s) | 392 |
| PleI | GAGTC | 1 cut(s) | 439 |
| PpsI | GAGTC | 1 cut(s) | 439 |
| PpuMI | RGGWCCY | 1 cut(s) | 175 |
| PshBI | ATTAAT | 1 cut(s) | 240 |
| PsiI | TTATAA | 1 cut(s) | 24 |
| Psp5II | RGGWCCY | 1 cut(s) | 175 |
| PspN4I | GGNNCC | 2 cut(s) | 177, 507 |
| PspPI | GGNCC | 1 cut(s) | 175 |
| PspPPI | RGGWCCY | 1 cut(s) | 175 |
| PsuI | RGATCY | 2 cut(s) | 149, 198 |
| RsaI | GTAC | 1 cut(s) | 124 |
| RsaNI | GTAC | 1 cut(s) | 123 |
| RseI | CAYNNNNRTG | 1 cut(s) | 86 |
| SaqAI | TTAA | 2 cut(s) | 240, 399 |
| SatI | GCNGC | 1 cut(s) | 391 |
| Sau3AI | GATC | 4 cut(s) | 78, 149, 198, 316 |
| Sau96I | GGNCC | 1 cut(s) | 175 |
| ScaI | AGTACT | 1 cut(s) | 124 |
| SchI | GAGTC | 1 cut(s) | 439 |
| SduI | GDGCHC | 2 cut(s) | 250, 454 |
| SetI | ASST | 6 cut(s) | 22, 309, 330, 361, 461, 494 |
| SfcI | CTRYAG | 2 cut(s) | 267, 430 |
| SinI | GGWCC | 1 cut(s) | 175 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 86 |
| Sse9I | AATT | 3 cut(s) | 351, 380, 396 |
| SsiI | CCGC | 1 cut(s) | 391 |
| SspMI | CTAG | 1 cut(s) | 120 |
| TaaI | ACNGT | 1 cut(s) | 314 |
| TaqI | TCGA | 1 cut(s) | 323 |
| TasI | AATT | 3 cut(s) | 351, 380, 396 |
| TatI | WGTACW | 1 cut(s) | 122 |
| TauI | GCSGC | 1 cut(s) | 393 |
| TfiI | GAWTC | 2 cut(s) | 289, 346 |
| Tru1I | TTAA | 2 cut(s) | 240, 399 |
| Tru9I | TTAA | 2 cut(s) | 240, 399 |
| TscAI | CASTG | 1 cut(s) | 469 |
| TseFI | GTSAC | 1 cut(s) | 228 |
| Tsp45I | GTSAC | 1 cut(s) | 228 |
| TspDTI | ATGAA | 3 cut(s) | 26, 76, 470 |
| TspGWI | ACGGA | 1 cut(s) | 216 |
| TspRI | CASTG | 1 cut(s) | 469 |
| VneI | GTGCAC | 1 cut(s) | 450 |
| VpaK11BI | GGWCC | 1 cut(s) | 175 |
| VspI | ATTAAT | 1 cut(s) | 240 |
| XapI | RAATTY | 1 cut(s) | 380 |
| XceI | RCATGY | 1 cut(s) | 77 |
| XspI | CTAG | 1 cut(s) | 120 |
| ZrmI | AGTACT | 1 cut(s) | 124 |
| Zsp2I | ATGCAT | 1 cut(s) | 42 |