Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15860 |
| rosa_laevigata | RLG00000012611 |
| rosa_multiflora | Rmu_sc0002869.1_g000014 Rmu_sc0008270.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00034560 Rroxscaffold_2G00077890 Rroxscaffold_4G00290430 |
| rosa_samantha | Rh2BG364500 Rh4CG080100 Rh5AG134100 Rh5CG023500 Rh5CG128100 Rh5DG508100 Rh6AG206900 Rh6AG227100 Rh7AG439500 Rh7CG459200 Rh7DG428900 |
| rosa_wichuraiana | Rw0G003600 Rw7G040660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 244 |
| AccIII | TCCGGA | 1 cut(s) | 201 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 226 |
| AgsI | TTSAA | 2 cut(s) | 131, 171 |
| AjnI | CCWGG | 1 cut(s) | 225 |
| AluBI | AGCT | 3 cut(s) | 65, 74, 166 |
| AluI | AGCT | 3 cut(s) | 65, 74, 166 |
| Aor13HI | TCCGGA | 1 cut(s) | 201 |
| AspS9I | GGNCC | 1 cut(s) | 96 |
| AvaII | GGWCC | 1 cut(s) | 96 |
| BccI | CCATC | 1 cut(s) | 137 |
| BciT130I | CCWGG | 1 cut(s) | 227 |
| BclI | TGATCA | 1 cut(s) | 154 |
| Bme1390I | CCNGG | 1 cut(s) | 227 |
| Bme18I | GGWCC | 1 cut(s) | 96 |
| BmgT120I | GGNCC | 1 cut(s) | 96 |
| BmiI | GGNNCC | 1 cut(s) | 97 |
| BmrFI | CCNGG | 1 cut(s) | 227 |
| BmsI | GCATC | 1 cut(s) | 225 |
| BpuEI | CTTGAG | 1 cut(s) | 38 |
| BsaWI | WCCGGW | 2 cut(s) | 10, 201 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 226 |
| BseAI | TCCGGA | 1 cut(s) | 201 |
| BseBI | CCWGG | 1 cut(s) | 227 |
| BseGI | GGATG | 2 cut(s) | 43, 216 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 226 |
| BseMII | CTCAG | 1 cut(s) | 176 |
| BsiSI | CCGG | 2 cut(s) | 11, 202 |
| BslFI | GGGAC | 1 cut(s) | 109 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 226 |
| BsmFI | GGGAC | 1 cut(s) | 109 |
| Bsp13I | TCCGGA | 1 cut(s) | 201 |
| Bsp143I | GATC | 1 cut(s) | 154 |
| BspCNI | CTCAG | 1 cut(s) | 175 |
| BspEI | TCCGGA | 1 cut(s) | 201 |
| BspLI | GGNNCC | 1 cut(s) | 97 |
| BssMI | GATC | 1 cut(s) | 154 |
| Bst2UI | CCWGG | 1 cut(s) | 227 |
| Bst6I | CTCTTC | 1 cut(s) | 126 |
| BstDEI | CTNAG | 1 cut(s) | 162 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 224 |
| BstF5I | GGATG | 2 cut(s) | 43, 216 |
| BstKTI | GATC | 1 cut(s) | 157 |
| BstMBI | GATC | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 71, 222 |
| BstNI | CCWGG | 1 cut(s) | 227 |
| BstSCI | CCNGG | 1 cut(s) | 225 |
| BtgZI | GCGATG | 1 cut(s) | 119 |
| BtsCI | GGATG | 2 cut(s) | 43, 216 |
| Cfr13I | GGNCC | 1 cut(s) | 96 |
| CviAII | CATG | 1 cut(s) | 211 |
| CviJI | RGCY | 3 cut(s) | 65, 74, 166 |
| CviKI_1 | RGCY | 3 cut(s) | 65, 74, 166 |
| DdeI | CTNAG | 1 cut(s) | 162 |
| DpnI | GATC | 1 cut(s) | 156 |
| DpnII | GATC | 1 cut(s) | 154 |
| Eam1104I | CTCTTC | 1 cut(s) | 126 |
| EarI | CTCTTC | 1 cut(s) | 126 |
| Eco47I | GGWCC | 1 cut(s) | 96 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 224 |
| EcoO109I | RGGNCCY | 1 cut(s) | 96 |
| EcoRII | CCWGG | 1 cut(s) | 225 |
| FaeI | CATG | 1 cut(s) | 214 |
| FaiI | YATR | 5 cut(s) | 33, 120, 182, 212, 244 |
| FaqI | GGGAC | 1 cut(s) | 109 |
| FatI | CATG | 1 cut(s) | 210 |
| FbaI | TGATCA | 1 cut(s) | 154 |
| FokI | GGATG | 2 cut(s) | 50, 203 |
| HapII | CCGG | 2 cut(s) | 11, 202 |
| Hin1II | CATG | 1 cut(s) | 214 |
| HincII | GTYRAC | 1 cut(s) | 54 |
| HindII | GTYRAC | 1 cut(s) | 54 |
| HindIII | AAGCTT | 1 cut(s) | 72 |
| HinfI | GANTC | 1 cut(s) | 112 |
| HpaI | GTTAAC | 1 cut(s) | 54 |
| HpaII | CCGG | 2 cut(s) | 11, 202 |
| Hpy166II | GTNNAC | 1 cut(s) | 54 |
| Hpy188III | TCNNGA | 2 cut(s) | 17, 202 |
| Hpy8I | GTNNAC | 1 cut(s) | 54 |
| HpyAV | CCTTC | 1 cut(s) | 230 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 71, 222 |
| HpyF3I | CTNAG | 1 cut(s) | 162 |
| Hsp92II | CATG | 1 cut(s) | 214 |
| Kpn2I | TCCGGA | 1 cut(s) | 201 |
| Ksp22I | TGATCA | 1 cut(s) | 154 |
| KspAI | GTTAAC | 1 cut(s) | 54 |
| Kzo9I | GATC | 1 cut(s) | 154 |
| LpnPI | CCDG | 4 cut(s) | 24, 212, 215, 239 |
| LweI | GCATC | 1 cut(s) | 225 |
| MalI | GATC | 1 cut(s) | 156 |
| MboI | GATC | 1 cut(s) | 154 |
| MboII | GAAGA | 1 cut(s) | 143 |
| MluCI | AATT | 1 cut(s) | 4 |
| MlyI | GAGTC | 1 cut(s) | 121 |
| MnlI | CCTC | 2 cut(s) | 13, 127 |
| MroI | TCCGGA | 1 cut(s) | 201 |
| MseI | TTAA | 1 cut(s) | 53 |
| MspI | CCGG | 2 cut(s) | 11, 202 |
| MspR9I | CCNGG | 1 cut(s) | 227 |
| MvaI | CCWGG | 1 cut(s) | 227 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 71, 222 |
| NdeII | GATC | 1 cut(s) | 154 |
| NlaIII | CATG | 1 cut(s) | 214 |
| NlaIV | GGNNCC | 1 cut(s) | 97 |
| PleI | GAGTC | 1 cut(s) | 120 |
| PpsI | GAGTC | 1 cut(s) | 120 |
| PpuMI | RGGWCCY | 1 cut(s) | 96 |
| PsiI | TTATAA | 1 cut(s) | 244 |
| Psp5II | RGGWCCY | 1 cut(s) | 96 |
| Psp6I | CCWGG | 1 cut(s) | 225 |
| PspGI | CCWGG | 1 cut(s) | 225 |
| PspN4I | GGNNCC | 1 cut(s) | 97 |
| PspPI | GGNCC | 1 cut(s) | 96 |
| PspPPI | RGGWCCY | 1 cut(s) | 96 |
| SaqAI | TTAA | 1 cut(s) | 53 |
| Sau3AI | GATC | 1 cut(s) | 154 |
| Sau96I | GGNCC | 1 cut(s) | 96 |
| SchI | GAGTC | 1 cut(s) | 121 |
| ScrFI | CCNGG | 1 cut(s) | 227 |
| SetI | ASST | 5 cut(s) | 67, 76, 101, 168, 231 |
| SfaNI | GCATC | 1 cut(s) | 225 |
| SgeI | CNNG | 8 cut(s) | 23, 29, 70, 98, 214, 223, 238, 239 |
| SinI | GGWCC | 1 cut(s) | 96 |
| SmlI | CTYRAG | 1 cut(s) | 17 |
| SmoI | CTYRAG | 1 cut(s) | 17 |
| Sse9I | AATT | 1 cut(s) | 4 |
| StyD4I | CCNGG | 1 cut(s) | 225 |
| TasI | AATT | 1 cut(s) | 4 |
| Tru1I | TTAA | 1 cut(s) | 53 |
| Tru9I | TTAA | 1 cut(s) | 53 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 105 |
| VpaK11BI | GGWCC | 1 cut(s) | 96 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 224 |