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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15860 |
| rosa_laevigata | RLG00000012611 |
| rosa_multiflora | Rmu_sc0002869.1_g000014 Rmu_sc0008270.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00034560 Rroxscaffold_2G00077890 Rroxscaffold_4G00290430 |
| rosa_samantha | Rh2BG364500 Rh4CG080100 Rh5AG134100 Rh5CG023500 Rh5CG128100 Rh5DG508100 Rh6AG206900 Rh6AG227100 Rh7AG439500 Rh7CG459200 Rh7DG428900 |
| rosa_wichuraiana | Rw0G003600 Rw7G040660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 16, 26, 106 |
| AcsI | RAATTY | 1 cut(s) | 208 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 111 |
| AgeI | ACCGGT | 1 cut(s) | 281 |
| AgsI | TTSAA | 3 cut(s) | 160, 170, 223 |
| AluBI | AGCT | 5 cut(s) | 130, 156, 191, 290, 299 |
| AluI | AGCT | 5 cut(s) | 130, 156, 191, 290, 299 |
| Alw21I | GWGCWC | 1 cut(s) | 193 |
| AoxI | GGCC | 1 cut(s) | 102 |
| ApoI | RAATTY | 1 cut(s) | 208 |
| AsiGI | ACCGGT | 1 cut(s) | 281 |
| AspS9I | GGNCC | 3 cut(s) | 43, 103, 320 |
| AvaII | GGWCC | 2 cut(s) | 43, 320 |
| AxyI | CCTNAGG | 1 cut(s) | 110 |
| BanII | GRGCYC | 1 cut(s) | 193 |
| BbsI | GAAGAC | 1 cut(s) | 211 |
| Bbv12I | GWGCWC | 1 cut(s) | 193 |
| BfaI | CTAG | 1 cut(s) | 200 |
| Bme18I | GGWCC | 2 cut(s) | 43, 320 |
| BmgT120I | GGNCC | 3 cut(s) | 43, 103, 320 |
| BmiI | GGNNCC | 2 cut(s) | 45, 321 |
| BpiI | GAAGAC | 1 cut(s) | 211 |
| BpmI | CTGGAG | 1 cut(s) | 263 |
| BsaJI | CCNNGG | 1 cut(s) | 89 |
| BsaWI | WCCGGW | 2 cut(s) | 235, 281 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 111 |
| Bse118I | RCCGGY | 2 cut(s) | 28, 281 |
| Bse21I | CCTNAGG | 1 cut(s) | 110 |
| BseDI | CCNNGG | 1 cut(s) | 89 |
| BseGI | GGATG | 2 cut(s) | 99, 268 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 111 |
| BshFI | GGCC | 1 cut(s) | 104 |
| BshTI | ACCGGT | 1 cut(s) | 281 |
| BsiHKAI | GWGCWC | 1 cut(s) | 193 |
| BsiSI | CCGG | 4 cut(s) | 29, 37, 236, 282 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 111 |
| BsnI | GGCC | 1 cut(s) | 104 |
| Bsp1286I | GDGCHC | 1 cut(s) | 193 |
| BspACI | CCGC | 3 cut(s) | 16, 26, 106 |
| BspANI | GGCC | 1 cut(s) | 104 |
| BspLI | GGNNCC | 2 cut(s) | 45, 321 |
| BsrFI | RCCGGY | 2 cut(s) | 28, 281 |
| BssAI | RCCGGY | 2 cut(s) | 28, 281 |
| BssECI | CCNNGG | 1 cut(s) | 89 |
| BssT1I | CCWWGG | 1 cut(s) | 89 |
| BstC8I | GCNNGC | 1 cut(s) | 106 |
| BstDEI | CTNAG | 1 cut(s) | 110 |
| BstF5I | GGATG | 2 cut(s) | 99, 268 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 296 |
| BstV2I | GAAGAC | 1 cut(s) | 211 |
| Bsu36I | CCTNAGG | 1 cut(s) | 110 |
| BsuRI | GGCC | 1 cut(s) | 104 |
| BtsCI | GGATG | 2 cut(s) | 99, 268 |
| BtsI | GCAGTG | 1 cut(s) | 25 |
| BtsIMutI | CAGTG | 1 cut(s) | 25 |
| Cac8I | GCNNGC | 1 cut(s) | 106 |
| Cfr10I | RCCGGY | 2 cut(s) | 28, 281 |
| Cfr13I | GGNCC | 3 cut(s) | 43, 103, 320 |
| CspAI | ACCGGT | 1 cut(s) | 281 |
| CviJI | RGCY | 8 cut(s) | 5, 104, 130, 156, 191, 203, 290, 299 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 104, 130, 156, 191, 203, 290, 299 |
| DdeI | CTNAG | 1 cut(s) | 110 |
| Ecl136II | GAGCTC | 1 cut(s) | 191 |
| Eco130I | CCWWGG | 1 cut(s) | 89 |
| Eco24I | GRGCYC | 1 cut(s) | 193 |
| Eco47I | GGWCC | 2 cut(s) | 43, 320 |
| Eco53kI | GAGCTC | 1 cut(s) | 191 |
| Eco81I | CCTNAGG | 1 cut(s) | 110 |
| EcoICRI | GAGCTC | 1 cut(s) | 191 |
| EcoO109I | RGGNCCY | 1 cut(s) | 320 |
| EcoT14I | CCWWGG | 1 cut(s) | 89 |
| EcoT38I | GRGCYC | 1 cut(s) | 193 |
| ErhI | CCWWGG | 1 cut(s) | 89 |
| FaiI | YATR | 2 cut(s) | 227, 258 |
| FauI | CCCGC | 2 cut(s) | 33, 113 |
| FokI | GGATG | 2 cut(s) | 106, 275 |
| FriOI | GRGCYC | 1 cut(s) | 193 |
| FspBI | CTAG | 1 cut(s) | 200 |
| GsuI | CTGGAG | 1 cut(s) | 263 |
| HaeIII | GGCC | 1 cut(s) | 104 |
| HapII | CCGG | 4 cut(s) | 29, 37, 236, 282 |
| HincII | GTYRAC | 1 cut(s) | 279 |
| HindII | GTYRAC | 1 cut(s) | 279 |
| HindIII | AAGCTT | 2 cut(s) | 154, 297 |
| HpaI | GTTAAC | 1 cut(s) | 279 |
| HpaII | CCGG | 4 cut(s) | 29, 37, 236, 282 |
| Hpy166II | GTNNAC | 1 cut(s) | 279 |
| Hpy188III | TCNNGA | 3 cut(s) | 150, 242, 311 |
| Hpy8I | GTNNAC | 1 cut(s) | 279 |
| Hpy99I | CGWCG | 1 cut(s) | 189 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 296 |
| HpyF3I | CTNAG | 1 cut(s) | 110 |
| KspAI | GTTAAC | 1 cut(s) | 279 |
| LpnPI | CCDG | 5 cut(s) | 42, 50, 227, 249, 295 |
| MaeI | CTAG | 1 cut(s) | 200 |
| MaeIII | GTNAC | 1 cut(s) | 20 |
| MboII | GAAGA | 1 cut(s) | 211 |
| MhlI | GDGCHC | 1 cut(s) | 193 |
| MluCI | AATT | 2 cut(s) | 208, 229 |
| MnlI | CCTC | 4 cut(s) | 21, 88, 108, 238 |
| MseI | TTAA | 1 cut(s) | 278 |
| MspI | CCGG | 4 cut(s) | 29, 37, 236, 282 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 296 |
| NlaIV | GGNNCC | 2 cut(s) | 45, 321 |
| NmuCI | GTSAC | 1 cut(s) | 20 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 181 |
| PinAI | ACCGGT | 1 cut(s) | 281 |
| PpuMI | RGGWCCY | 1 cut(s) | 320 |
| Psp124BI | GAGCTC | 1 cut(s) | 193 |
| Psp5II | RGGWCCY | 1 cut(s) | 320 |
| PspN4I | GGNNCC | 2 cut(s) | 45, 321 |
| PspPI | GGNCC | 3 cut(s) | 43, 103, 320 |
| PspPPI | RGGWCCY | 1 cut(s) | 320 |
| SacI | GAGCTC | 1 cut(s) | 193 |
| SaqAI | TTAA | 1 cut(s) | 278 |
| Sau96I | GGNCC | 3 cut(s) | 43, 103, 320 |
| SduI | GDGCHC | 1 cut(s) | 193 |
| SetI | ASST | 9 cut(s) | 80, 119, 132, 158, 165, 193, 292, 301, 325 |
| SinI | GGWCC | 2 cut(s) | 43, 320 |
| Sse9I | AATT | 2 cut(s) | 208, 229 |
| SsiI | CCGC | 3 cut(s) | 16, 26, 106 |
| SspMI | CTAG | 1 cut(s) | 200 |
| SstI | GAGCTC | 1 cut(s) | 193 |
| StyI | CCWWGG | 1 cut(s) | 89 |
| TaqI | TCGA | 1 cut(s) | 175 |
| TasI | AATT | 2 cut(s) | 208, 229 |
| Tru1I | TTAA | 1 cut(s) | 278 |
| Tru9I | TTAA | 1 cut(s) | 278 |
| TscAI | CASTG | 1 cut(s) | 25 |
| TseFI | GTSAC | 1 cut(s) | 20 |
| Tsp45I | GTSAC | 1 cut(s) | 20 |
| TspDTI | ATGAA | 2 cut(s) | 110, 242 |
| TspGWI | ACGGA | 1 cut(s) | 56 |
| TspRI | CASTG | 1 cut(s) | 25 |
| VpaK11BI | GGWCC | 2 cut(s) | 43, 320 |
| XapI | RAATTY | 1 cut(s) | 208 |
| XspI | CTAG | 1 cut(s) | 200 |