K homology RNA-binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1101300.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0136151 |
| rosa_laevigata | RLG00000019700 |
| rosa_multiflora | Rmu_sc0002070.1_g000018 Rmu_sc0010188.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00032180 Rroxscaffold_2G00114000 Rroxscaffold_2G00149490 Rroxscaffold_3G00257240 Rroxscaffold_5G00344950 Rroxscaffold_5G00350550 Rroxscaffold_6G00396420 |
| rosa_samantha | Rh1AG093900 Rh1DG198000 Rh2BG403000 Rh2BG403100 Rh2CG371500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 207 |
| AcsI | RAATTY | 1 cut(s) | 45 |
| AluBI | AGCT | 2 cut(s) | 90, 113 |
| AluI | AGCT | 2 cut(s) | 90, 113 |
| Alw21I | GWGCWC | 1 cut(s) | 115 |
| ApoI | RAATTY | 1 cut(s) | 45 |
| AsuHPI | GGTGA | 1 cut(s) | 38 |
| BanII | GRGCYC | 1 cut(s) | 115 |
| Bbv12I | GWGCWC | 1 cut(s) | 115 |
| BccI | CCATC | 2 cut(s) | 88, 141 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BisI | GCNGC | 1 cut(s) | 207 |
| BlpI | GCTNAGC | 1 cut(s) | 66 |
| BlsI | GCNGC | 1 cut(s) | 208 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 66 |
| BseGI | GGATG | 2 cut(s) | 99, 152 |
| BseMII | CTCAG | 1 cut(s) | 80 |
| BsiHKAI | GWGCWC | 1 cut(s) | 115 |
| BslFI | GGGAC | 1 cut(s) | 213 |
| BsmFI | GGGAC | 1 cut(s) | 213 |
| Bsp1286I | GDGCHC | 1 cut(s) | 115 |
| Bsp143I | GATC | 1 cut(s) | 3 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 66 |
| BspACI | CCGC | 1 cut(s) | 207 |
| BspCNI | CTCAG | 1 cut(s) | 79 |
| BssMI | GATC | 1 cut(s) | 3 |
| Bst4CI | ACNGT | 1 cut(s) | 280 |
| BstDEI | CTNAG | 1 cut(s) | 66 |
| BstF5I | GGATG | 2 cut(s) | 99, 152 |
| BstKTI | GATC | 1 cut(s) | 6 |
| BstMBI | GATC | 1 cut(s) | 3 |
| BtsCI | GGATG | 2 cut(s) | 99, 152 |
| CviAII | CATG | 1 cut(s) | 120 |
| CviJI | RGCY | 3 cut(s) | 90, 113, 206 |
| CviKI_1 | RGCY | 3 cut(s) | 90, 113, 206 |
| DdeI | CTNAG | 1 cut(s) | 66 |
| DpnI | GATC | 1 cut(s) | 5 |
| DpnII | GATC | 1 cut(s) | 3 |
| Ecl136II | GAGCTC | 1 cut(s) | 113 |
| Eco24I | GRGCYC | 1 cut(s) | 115 |
| Eco53kI | GAGCTC | 1 cut(s) | 113 |
| EcoICRI | GAGCTC | 1 cut(s) | 113 |
| EcoT38I | GRGCYC | 1 cut(s) | 115 |
| FaeI | CATG | 1 cut(s) | 123 |
| FaiI | YATR | 8 cut(s) | 15, 39, 121, 158, 177, 179, 227, 251 |
| FaqI | GGGAC | 1 cut(s) | 213 |
| FatI | CATG | 1 cut(s) | 119 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| Fnu4HI | GCNGC | 1 cut(s) | 207 |
| FokI | GGATG | 2 cut(s) | 106, 159 |
| FriOI | GRGCYC | 1 cut(s) | 115 |
| Fsp4HI | GCNGC | 1 cut(s) | 207 |
| GluI | GCNGC | 1 cut(s) | 207 |
| Hin1II | CATG | 1 cut(s) | 123 |
| HinfI | GANTC | 1 cut(s) | 135 |
| HphI | GGTGA | 1 cut(s) | 38 |
| Hpy166II | GTNNAC | 2 cut(s) | 29, 153 |
| Hpy188I | TCNGA | 1 cut(s) | 140 |
| Hpy8I | GTNNAC | 2 cut(s) | 29, 153 |
| Hpy99I | CGWCG | 2 cut(s) | 166, 280 |
| HpyCH4III | ACNGT | 1 cut(s) | 280 |
| HpyCH4IV | ACGT | 1 cut(s) | 161 |
| HpyF3I | CTNAG | 1 cut(s) | 66 |
| HpySE526I | ACGT | 1 cut(s) | 161 |
| Hsp92II | CATG | 1 cut(s) | 123 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 1 cut(s) | 3 |
| LpnPI | CCDG | 1 cut(s) | 76 |
| MaeII | ACGT | 1 cut(s) | 161 |
| MaeIII | GTNAC | 2 cut(s) | 81, 101 |
| MalI | GATC | 1 cut(s) | 5 |
| MboI | GATC | 1 cut(s) | 3 |
| MhlI | GDGCHC | 1 cut(s) | 115 |
| MluCI | AATT | 2 cut(s) | 45, 258 |
| MlyI | GAGTC | 1 cut(s) | 144 |
| MmeI | TCCRAC | 1 cut(s) | 118 |
| MnlI | CCTC | 1 cut(s) | 178 |
| MseI | TTAA | 2 cut(s) | 272, 282 |
| NdeII | GATC | 1 cut(s) | 3 |
| NlaIII | CATG | 1 cut(s) | 123 |
| NmuCI | GTSAC | 1 cut(s) | 101 |
| PkrI | GCNGC | 1 cut(s) | 208 |
| PleI | GAGTC | 1 cut(s) | 143 |
| PpsI | GAGTC | 1 cut(s) | 143 |
| Psp124BI | GAGCTC | 1 cut(s) | 115 |
| SacI | GAGCTC | 1 cut(s) | 115 |
| SaqAI | TTAA | 2 cut(s) | 272, 282 |
| SatI | GCNGC | 1 cut(s) | 207 |
| Sau3AI | GATC | 1 cut(s) | 3 |
| SchI | GAGTC | 1 cut(s) | 144 |
| SduI | GDGCHC | 1 cut(s) | 115 |
| SetI | ASST | 6 cut(s) | 12, 28, 92, 115, 164, 174 |
| Sse9I | AATT | 2 cut(s) | 45, 258 |
| SsiI | CCGC | 1 cut(s) | 207 |
| SstI | GAGCTC | 1 cut(s) | 115 |
| TaaI | ACNGT | 1 cut(s) | 280 |
| TaiI | ACGT | 1 cut(s) | 164 |
| TaqII | GACCGA | 1 cut(s) | 105 |
| TasI | AATT | 2 cut(s) | 45, 258 |
| TauI | GCSGC | 1 cut(s) | 209 |
| Tru1I | TTAA | 2 cut(s) | 272, 282 |
| Tru9I | TTAA | 2 cut(s) | 272, 282 |
| TseFI | GTSAC | 1 cut(s) | 101 |
| Tsp45I | GTSAC | 1 cut(s) | 101 |
| XapI | RAATTY | 1 cut(s) | 45 |