K homology RNA-binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1101300.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0136151 |
| rosa_laevigata | RLG00000019700 |
| rosa_multiflora | Rmu_sc0002070.1_g000018 Rmu_sc0010188.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00032180 Rroxscaffold_2G00114000 Rroxscaffold_2G00149490 Rroxscaffold_3G00257240 Rroxscaffold_5G00344950 Rroxscaffold_5G00350550 Rroxscaffold_6G00396420 |
| rosa_samantha | Rh1AG093900 Rh1DG198000 Rh2BG403000 Rh2BG403100 Rh2CG371500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 50 |
| AciI | CCGC | 3 cut(s) | 68, 114, 121 |
| AclWI | GGATC | 1 cut(s) | 114 |
| AcsI | RAATTY | 1 cut(s) | 243 |
| AcyI | GRCGYC | 1 cut(s) | 51 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 60, 127 |
| AgsI | TTSAA | 1 cut(s) | 46 |
| AluBI | AGCT | 4 cut(s) | 10, 26, 95, 288 |
| AluI | AGCT | 4 cut(s) | 10, 26, 95, 288 |
| Alw26I | GTCTC | 1 cut(s) | 82 |
| AlwI | GGATC | 1 cut(s) | 114 |
| ApeKI | GCWGC | 1 cut(s) | 7 |
| ApoI | RAATTY | 1 cut(s) | 243 |
| AspLEI | GCGC | 1 cut(s) | 53 |
| AsuHPI | GGTGA | 2 cut(s) | 142, 236 |
| BanI | GGYRCC | 1 cut(s) | 50 |
| BbvI | GCAGC | 1 cut(s) | 19 |
| BccI | CCATC | 2 cut(s) | 127, 286 |
| BclI | TGATCA | 1 cut(s) | 201 |
| BcoDI | GTCTC | 1 cut(s) | 82 |
| BfaI | CTAG | 2 cut(s) | 32, 174 |
| BfoI | RGCGCY | 1 cut(s) | 54 |
| BisI | GCNGC | 2 cut(s) | 8, 121 |
| BlsI | GCNGC | 2 cut(s) | 9, 122 |
| BmiI | GGNNCC | 1 cut(s) | 52 |
| BmsI | GCATC | 1 cut(s) | 146 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 79, 111 |
| BpuEI | CTTGAG | 1 cut(s) | 32 |
| BsaHI | GRCGYC | 1 cut(s) | 51 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 60, 127 |
| BseGI | GGATG | 2 cut(s) | 161, 297 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 60, 127 |
| BseRI | GAGGAG | 1 cut(s) | 53 |
| BseXI | GCAGC | 1 cut(s) | 19 |
| BsgI | GTGCAG | 1 cut(s) | 26 |
| BshNI | GGYRCC | 1 cut(s) | 50 |
| BsiSI | CCGG | 2 cut(s) | 54, 192 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 60, 127 |
| BsmAI | GTCTC | 1 cut(s) | 82 |
| Bsp143I | GATC | 2 cut(s) | 106, 201 |
| BspACI | CCGC | 3 cut(s) | 68, 114, 121 |
| BspLI | GGNNCC | 1 cut(s) | 52 |
| BspPI | GGATC | 1 cut(s) | 114 |
| BspT107I | GGYRCC | 1 cut(s) | 50 |
| BssMI | GATC | 2 cut(s) | 106, 201 |
| BssNI | GRCGYC | 1 cut(s) | 51 |
| Bst4CI | ACNGT | 1 cut(s) | 74 |
| BstACI | GRCGYC | 1 cut(s) | 51 |
| BstC8I | GCNNGC | 1 cut(s) | 118 |
| BstF5I | GGATG | 2 cut(s) | 161, 297 |
| BstH2I | RGCGCY | 1 cut(s) | 54 |
| BstHHI | GCGC | 1 cut(s) | 53 |
| BstKTI | GATC | 2 cut(s) | 109, 204 |
| BstMAI | GTCTC | 1 cut(s) | 82 |
| BstMBI | GATC | 2 cut(s) | 106, 201 |
| BstV1I | GCAGC | 1 cut(s) | 19 |
| BtsCI | GGATG | 2 cut(s) | 161, 297 |
| BtsIMutI | CAGTG | 1 cut(s) | 70 |
| Cac8I | GCNNGC | 1 cut(s) | 118 |
| CfoI | GCGC | 1 cut(s) | 53 |
| CviJI | RGCY | 6 cut(s) | 10, 26, 81, 95, 120, 288 |
| CviKI_1 | RGCY | 6 cut(s) | 10, 26, 81, 95, 120, 288 |
| DinI | GGCGCC | 1 cut(s) | 52 |
| DpnI | GATC | 2 cut(s) | 108, 203 |
| DpnII | GATC | 2 cut(s) | 106, 201 |
| EgeI | GGCGCC | 1 cut(s) | 52 |
| EheI | GGCGCC | 1 cut(s) | 52 |
| FaiI | YATR | 2 cut(s) | 213, 237 |
| FbaI | TGATCA | 1 cut(s) | 201 |
| Fnu4HI | GCNGC | 2 cut(s) | 8, 121 |
| FokI | GGATG | 1 cut(s) | 168 |
| Fsp4HI | GCNGC | 2 cut(s) | 8, 121 |
| FspBI | CTAG | 2 cut(s) | 32, 174 |
| GlaI | GCGC | 1 cut(s) | 52 |
| GluI | GCNGC | 2 cut(s) | 8, 121 |
| HaeII | RGCGCY | 1 cut(s) | 54 |
| HapII | CCGG | 2 cut(s) | 54, 192 |
| HhaI | GCGC | 1 cut(s) | 53 |
| Hin1I | GRCGYC | 1 cut(s) | 51 |
| Hin6I | GCGC | 1 cut(s) | 51 |
| HinP1I | GCGC | 1 cut(s) | 51 |
| HindIII | AAGCTT | 1 cut(s) | 24 |
| HinfI | GANTC | 2 cut(s) | 161, 188 |
| HpaII | CCGG | 2 cut(s) | 54, 192 |
| HphI | GGTGA | 2 cut(s) | 142, 236 |
| Hpy166II | GTNNAC | 1 cut(s) | 227 |
| Hpy188I | TCNGA | 2 cut(s) | 99, 106 |
| Hpy8I | GTNNAC | 1 cut(s) | 227 |
| HpyAV | CCTTC | 1 cut(s) | 40 |
| HpyCH4III | ACNGT | 1 cut(s) | 74 |
| HpyCH4V | TGCA | 1 cut(s) | 7 |
| Hsp92I | GRCGYC | 1 cut(s) | 51 |
| HspAI | GCGC | 1 cut(s) | 51 |
| KasI | GGCGCC | 1 cut(s) | 50 |
| Ksp22I | TGATCA | 1 cut(s) | 201 |
| Kzo9I | GATC | 2 cut(s) | 106, 201 |
| LmnI | GCTCC | 1 cut(s) | 100 |
| LpnPI | CCDG | 4 cut(s) | 67, 67, 205, 274 |
| Lsp1109I | GCAGC | 1 cut(s) | 19 |
| LweI | GCATC | 1 cut(s) | 146 |
| MaeI | CTAG | 2 cut(s) | 32, 174 |
| MaeIII | GTNAC | 1 cut(s) | 279 |
| MalI | GATC | 2 cut(s) | 108, 203 |
| MboI | GATC | 2 cut(s) | 106, 201 |
| MboII | GAAGA | 1 cut(s) | 32 |
| MluCI | AATT | 2 cut(s) | 58, 243 |
| Mly113I | GGCGCC | 1 cut(s) | 51 |
| MlyI | GAGTC | 2 cut(s) | 155, 197 |
| MmeI | TCCRAC | 1 cut(s) | 189 |
| MnlI | CCTC | 2 cut(s) | 7, 31 |
| MspI | CCGG | 2 cut(s) | 54, 192 |
| NarI | GGCGCC | 1 cut(s) | 51 |
| NdeII | GATC | 2 cut(s) | 106, 201 |
| NlaIV | GGNNCC | 1 cut(s) | 52 |
| NmeAIII | GCCGAG | 1 cut(s) | 244 |
| PkrI | GCNGC | 2 cut(s) | 9, 122 |
| PleI | GAGTC | 2 cut(s) | 155, 196 |
| PluTI | GGCGCC | 1 cut(s) | 54 |
| PpsI | GAGTC | 2 cut(s) | 155, 196 |
| PspN4I | GGNNCC | 1 cut(s) | 52 |
| SatI | GCNGC | 2 cut(s) | 8, 121 |
| Sau3AI | GATC | 2 cut(s) | 106, 201 |
| SchI | GAGTC | 2 cut(s) | 155, 197 |
| SetI | ASST | 7 cut(s) | 12, 18, 28, 97, 210, 226, 290 |
| SfaNI | GCATC | 1 cut(s) | 146 |
| SfoI | GGCGCC | 1 cut(s) | 52 |
| SmlI | CTYRAG | 1 cut(s) | 11 |
| SmoI | CTYRAG | 1 cut(s) | 11 |
| Sse9I | AATT | 2 cut(s) | 58, 243 |
| SsiI | CCGC | 3 cut(s) | 68, 114, 121 |
| SspDI | GGCGCC | 1 cut(s) | 50 |
| SspMI | CTAG | 2 cut(s) | 32, 174 |
| TaaI | ACNGT | 1 cut(s) | 74 |
| TasI | AATT | 2 cut(s) | 58, 243 |
| TauI | GCSGC | 1 cut(s) | 123 |
| TscAI | CASTG | 1 cut(s) | 77 |
| TseI | GCWGC | 1 cut(s) | 7 |
| TspRI | CASTG | 1 cut(s) | 77 |
| XapI | RAATTY | 1 cut(s) | 243 |
| XspI | CTAG | 2 cut(s) | 32, 174 |