No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1101300.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0136151 |
| rosa_laevigata | RLG00000019700 |
| rosa_multiflora | Rmu_sc0002070.1_g000018 Rmu_sc0010188.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00032180 Rroxscaffold_2G00114000 Rroxscaffold_2G00149490 Rroxscaffold_3G00257240 Rroxscaffold_5G00344950 Rroxscaffold_5G00350550 Rroxscaffold_6G00396420 |
| rosa_samantha | Rh1AG093900 Rh1DG198000 Rh2BG403000 Rh2BG403100 Rh2CG371500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 22 |
| AciI | CCGC | 1 cut(s) | 58 |
| AgsI | TTSAA | 1 cut(s) | 150 |
| AjnI | CCWGG | 1 cut(s) | 25 |
| AoxI | GGCC | 1 cut(s) | 76 |
| AspS9I | GGNCC | 1 cut(s) | 76 |
| BanI | GGYRCC | 1 cut(s) | 22 |
| BbsI | GAAGAC | 2 cut(s) | 11, 170 |
| BccI | CCATC | 1 cut(s) | 7 |
| BciT130I | CCWGG | 1 cut(s) | 27 |
| Bme1390I | CCNGG | 1 cut(s) | 27 |
| BmgT120I | GGNCC | 1 cut(s) | 76 |
| BmiI | GGNNCC | 2 cut(s) | 24, 77 |
| BmrFI | CCNGG | 1 cut(s) | 27 |
| BpiI | GAAGAC | 2 cut(s) | 11, 170 |
| BseBI | CCWGG | 1 cut(s) | 27 |
| BseGI | GGATG | 1 cut(s) | 87 |
| BshFI | GGCC | 1 cut(s) | 78 |
| BshNI | GGYRCC | 1 cut(s) | 22 |
| BsiSI | CCGG | 1 cut(s) | 79 |
| BsmI | GAATGC | 1 cut(s) | 146 |
| BsnI | GGCC | 1 cut(s) | 78 |
| BspACI | CCGC | 1 cut(s) | 58 |
| BspANI | GGCC | 1 cut(s) | 78 |
| BspLI | GGNNCC | 2 cut(s) | 24, 77 |
| BspT107I | GGYRCC | 1 cut(s) | 22 |
| Bst2UI | CCWGG | 1 cut(s) | 27 |
| BstF5I | GGATG | 1 cut(s) | 87 |
| BstNI | CCWGG | 1 cut(s) | 27 |
| BstSCI | CCNGG | 1 cut(s) | 25 |
| BstV2I | GAAGAC | 2 cut(s) | 11, 170 |
| BsuRI | GGCC | 1 cut(s) | 78 |
| BtsCI | GGATG | 1 cut(s) | 87 |
| Cfr13I | GGNCC | 1 cut(s) | 76 |
| CviAII | CATG | 1 cut(s) | 108 |
| CviJI | RGCY | 1 cut(s) | 78 |
| CviKI_1 | RGCY | 1 cut(s) | 78 |
| EcoRII | CCWGG | 1 cut(s) | 25 |
| EcoT22I | ATGCAT | 1 cut(s) | 113 |
| FaeI | CATG | 1 cut(s) | 111 |
| FaiI | YATR | 4 cut(s) | 109, 113, 171, 173 |
| FatI | CATG | 1 cut(s) | 107 |
| FauI | CCCGC | 1 cut(s) | 51 |
| FauNDI | CATATG | 1 cut(s) | 171 |
| FokI | GGATG | 1 cut(s) | 94 |
| HaeIII | GGCC | 1 cut(s) | 78 |
| HapII | CCGG | 1 cut(s) | 79 |
| Hin1II | CATG | 1 cut(s) | 111 |
| HinfI | GANTC | 1 cut(s) | 166 |
| HpaII | CCGG | 1 cut(s) | 79 |
| HpyAV | CCTTC | 2 cut(s) | 58, 156 |
| HpyCH4V | TGCA | 2 cut(s) | 111, 119 |
| Hsp92II | CATG | 1 cut(s) | 111 |
| LpnPI | CCDG | 3 cut(s) | 12, 39, 92 |
| MaeIII | GTNAC | 1 cut(s) | 89 |
| MboII | GAAGA | 2 cut(s) | 16, 175 |
| MlyI | GAGTC | 1 cut(s) | 160 |
| Mph1103I | ATGCAT | 1 cut(s) | 113 |
| MspI | CCGG | 1 cut(s) | 79 |
| MspR9I | CCNGG | 1 cut(s) | 27 |
| Mva1269I | GAATGC | 1 cut(s) | 146 |
| MvaI | CCWGG | 1 cut(s) | 27 |
| NdeI | CATATG | 1 cut(s) | 171 |
| NlaIII | CATG | 1 cut(s) | 111 |
| NlaIV | GGNNCC | 2 cut(s) | 24, 77 |
| NmeAIII | GCCGAG | 1 cut(s) | 34 |
| NmuCI | GTSAC | 1 cut(s) | 89 |
| NsiI | ATGCAT | 1 cut(s) | 113 |
| PctI | GAATGC | 1 cut(s) | 146 |
| PleI | GAGTC | 1 cut(s) | 160 |
| PpsI | GAGTC | 1 cut(s) | 160 |
| Psp6I | CCWGG | 1 cut(s) | 25 |
| PspGI | CCWGG | 1 cut(s) | 25 |
| PspN4I | GGNNCC | 2 cut(s) | 24, 77 |
| PspPI | GGNCC | 1 cut(s) | 76 |
| Sau96I | GGNCC | 1 cut(s) | 76 |
| SchI | GAGTC | 1 cut(s) | 160 |
| ScrFI | CCNGG | 1 cut(s) | 27 |
| SetI | ASST | 1 cut(s) | 24 |
| SsiI | CCGC | 1 cut(s) | 58 |
| SspI | AATATT | 1 cut(s) | 34 |
| StyD4I | CCNGG | 1 cut(s) | 25 |
| TaqI | TCGA | 1 cut(s) | 138 |
| TaqII | GACCGA | 1 cut(s) | 93 |
| TseFI | GTSAC | 1 cut(s) | 89 |
| Tsp45I | GTSAC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 2 cut(s) | 17, 176 |
| Zsp2I | ATGCAT | 1 cut(s) | 113 |