The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity.
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11020 |
| fragaria_vesca | FvH4_1g03950 FvH4_1g03950 FvH4_1g03950 FvH4_6g51470 |
| malus_domestica | MD02G1038000.v1.1 MD15G1178300.v1.1 |
| prunus_persica | Prupe.7G237300_v2.0.a1 Prupe.7G237300_v2.0.a1 Prupe.7G237300_v2.0.a1 Prupe.7G237300_v2.0.a1 |
| pyrus_communis | pycom02g03110 pycom15g16000 |
| rosa_chinensis | RchiOBHm_Chr2g0089431 |
| rosa_laevigata | RLG00000016027 |
| rosa_multiflora | Rmu_sc0000197.1_g000010 Rmu_sc0000197.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00151940 Rroxscaffold_5G00344790 |
| rosa_rugosa | Rorug02G0000800 Rorug02G0000800 |
| rosa_samantha | Rh2AG045900 Rh2BG044400 Rh2CG046300 Rh2DG045800 |
| rosa_wichuraiana | Rw2G003670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 14 |
| AclWI | GGATC | 2 cut(s) | 54, 422 |
| AcsI | RAATTY | 1 cut(s) | 25 |
| AcuI | CTGAAG | 1 cut(s) | 4 |
| AcyI | GRCGYC | 1 cut(s) | 15 |
| AfaI | GTAC | 1 cut(s) | 383 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 172 |
| AgsI | TTSAA | 1 cut(s) | 154 |
| AjnI | CCWGG | 2 cut(s) | 249, 303 |
| AluBI | AGCT | 1 cut(s) | 293 |
| AluI | AGCT | 1 cut(s) | 293 |
| Alw26I | GTCTC | 1 cut(s) | 334 |
| AlwI | GGATC | 2 cut(s) | 54, 422 |
| ApeKI | GCWGC | 3 cut(s) | 112, 180, 308 |
| ApoI | RAATTY | 1 cut(s) | 25 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 29 |
| AspLEI | GCGC | 1 cut(s) | 17 |
| AspS9I | GGNCC | 1 cut(s) | 394 |
| AvaII | GGWCC | 1 cut(s) | 394 |
| BanI | GGYRCC | 1 cut(s) | 14 |
| BbvI | GCAGC | 3 cut(s) | 99, 167, 295 |
| BccI | CCATC | 4 cut(s) | 5, 32, 166, 195 |
| BciT130I | CCWGG | 2 cut(s) | 251, 305 |
| BcoDI | GTCTC | 1 cut(s) | 334 |
| BfoI | RGCGCY | 1 cut(s) | 18 |
| BisI | GCNGC | 3 cut(s) | 113, 181, 309 |
| BlsI | GCNGC | 3 cut(s) | 114, 182, 310 |
| Bme1390I | CCNGG | 2 cut(s) | 251, 305 |
| Bme18I | GGWCC | 1 cut(s) | 394 |
| BmgT120I | GGNCC | 1 cut(s) | 394 |
| BmiI | GGNNCC | 1 cut(s) | 16 |
| BmrFI | CCNGG | 2 cut(s) | 251, 305 |
| BpuEI | CTTGAG | 1 cut(s) | 443 |
| BsaHI | GRCGYC | 1 cut(s) | 15 |
| BsaJI | CCNNGG | 2 cut(s) | 167, 249 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 172 |
| Bse3DI | GCAATG | 1 cut(s) | 166 |
| BseBI | CCWGG | 2 cut(s) | 251, 305 |
| BseDI | CCNNGG | 2 cut(s) | 167, 249 |
| BseGI | GGATG | 3 cut(s) | 177, 206, 351 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 172 |
| BseMI | GCAATG | 1 cut(s) | 166 |
| BseXI | GCAGC | 3 cut(s) | 99, 167, 295 |
| BshNI | GGYRCC | 1 cut(s) | 14 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 172 |
| BsmAI | GTCTC | 1 cut(s) | 334 |
| Bsp143I | GATC | 2 cut(s) | 46, 427 |
| BspLI | GGNNCC | 1 cut(s) | 16 |
| BspPI | GGATC | 2 cut(s) | 54, 422 |
| BspQI | GCTCTTC | 1 cut(s) | 435 |
| BspT107I | GGYRCC | 1 cut(s) | 14 |
| BsrDI | GCAATG | 1 cut(s) | 166 |
| BssECI | CCNNGG | 2 cut(s) | 167, 249 |
| BssMI | GATC | 2 cut(s) | 46, 427 |
| BssNI | GRCGYC | 1 cut(s) | 15 |
| Bst2UI | CCWGG | 2 cut(s) | 251, 305 |
| Bst4CI | ACNGT | 2 cut(s) | 143, 191 |
| Bst6I | CTCTTC | 1 cut(s) | 435 |
| BstACI | GRCGYC | 1 cut(s) | 15 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 245 |
| BstC8I | GCNNGC | 2 cut(s) | 178, 241 |
| BstDSI | CCRYGG | 1 cut(s) | 167 |
| BstF5I | GGATG | 3 cut(s) | 177, 206, 351 |
| BstH2I | RGCGCY | 1 cut(s) | 18 |
| BstHHI | GCGC | 1 cut(s) | 17 |
| BstKTI | GATC | 2 cut(s) | 49, 430 |
| BstMAI | GTCTC | 1 cut(s) | 334 |
| BstMBI | GATC | 2 cut(s) | 46, 427 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 245, 317 |
| BstNI | CCWGG | 2 cut(s) | 251, 305 |
| BstNSI | RCATGY | 1 cut(s) | 243 |
| BstSCI | CCNGG | 2 cut(s) | 249, 303 |
| BstV1I | GCAGC | 3 cut(s) | 99, 167, 295 |
| BstX2I | RGATCY | 1 cut(s) | 427 |
| BstYI | RGATCY | 1 cut(s) | 427 |
| BtgI | CCRYGG | 1 cut(s) | 167 |
| BtsCI | GGATG | 3 cut(s) | 177, 206, 351 |
| BtsIMutI | CAGTG | 2 cut(s) | 40, 139 |
| Cac8I | GCNNGC | 2 cut(s) | 178, 241 |
| CfoI | GCGC | 1 cut(s) | 17 |
| Cfr13I | GGNCC | 1 cut(s) | 394 |
| CseI | GACGC | 2 cut(s) | 216, 434 |
| Csp6I | GTAC | 1 cut(s) | 382 |
| CviAII | CATG | 3 cut(s) | 240, 401, 437 |
| CviJI | RGCY | 7 cut(s) | 130, 149, 176, 180, 293, 308, 320 |
| CviKI_1 | RGCY | 7 cut(s) | 130, 149, 176, 180, 293, 308, 320 |
| CviQI | GTAC | 1 cut(s) | 382 |
| DinI | GGCGCC | 1 cut(s) | 16 |
| DpnI | GATC | 2 cut(s) | 48, 429 |
| DpnII | GATC | 2 cut(s) | 46, 427 |
| Eam1104I | CTCTTC | 1 cut(s) | 435 |
| EarI | CTCTTC | 1 cut(s) | 435 |
| Eco47I | GGWCC | 1 cut(s) | 394 |
| Eco57I | CTGAAG | 1 cut(s) | 4 |
| EcoO109I | RGGNCCY | 1 cut(s) | 394 |
| EcoRI | GAATTC | 1 cut(s) | 25 |
| EcoRII | CCWGG | 2 cut(s) | 249, 303 |
| EgeI | GGCGCC | 1 cut(s) | 16 |
| EheI | GGCGCC | 1 cut(s) | 16 |
| FaeI | CATG | 3 cut(s) | 243, 404, 440 |
| FatI | CATG | 3 cut(s) | 239, 400, 436 |
| Fnu4HI | GCNGC | 3 cut(s) | 113, 181, 309 |
| FokI | GGATG | 3 cut(s) | 184, 213, 338 |
| Fsp4HI | GCNGC | 3 cut(s) | 113, 181, 309 |
| GlaI | GCGC | 1 cut(s) | 16 |
| GluI | GCNGC | 3 cut(s) | 113, 181, 309 |
| HaeII | RGCGCY | 1 cut(s) | 18 |
| HgaI | GACGC | 2 cut(s) | 216, 434 |
| HhaI | GCGC | 1 cut(s) | 17 |
| Hin1I | GRCGYC | 1 cut(s) | 15 |
| Hin1II | CATG | 3 cut(s) | 243, 404, 440 |
| Hin6I | GCGC | 1 cut(s) | 15 |
| HinP1I | GCGC | 1 cut(s) | 15 |
| HinfI | GANTC | 1 cut(s) | 330 |
| Hpy188I | TCNGA | 2 cut(s) | 327, 450 |
| Hpy188III | TCNNGA | 3 cut(s) | 22, 355, 431 |
| HpyAV | CCTTC | 3 cut(s) | 28, 160, 407 |
| HpyCH4III | ACNGT | 2 cut(s) | 143, 191 |
| HpyCH4V | TGCA | 1 cut(s) | 87 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 245, 317 |
| Hsp92I | GRCGYC | 1 cut(s) | 15 |
| Hsp92II | CATG | 3 cut(s) | 243, 404, 440 |
| HspAI | GCGC | 1 cut(s) | 15 |
| KasI | GGCGCC | 1 cut(s) | 14 |
| Kzo9I | GATC | 2 cut(s) | 46, 427 |
| LguI | GCTCTTC | 1 cut(s) | 435 |
| Lsp1109I | GCAGC | 3 cut(s) | 99, 167, 295 |
| MaeIII | GTNAC | 1 cut(s) | 407 |
| MalI | GATC | 2 cut(s) | 48, 429 |
| MboI | GATC | 2 cut(s) | 46, 427 |
| MboII | GAAGA | 1 cut(s) | 452 |
| MflI | RGATCY | 1 cut(s) | 427 |
| MluCI | AATT | 1 cut(s) | 25 |
| Mly113I | GGCGCC | 1 cut(s) | 15 |
| MnlI | CCTC | 3 cut(s) | 229, 357, 385 |
| MroXI | GAANNNNTTC | 1 cut(s) | 29 |
| MspR9I | CCNGG | 2 cut(s) | 251, 305 |
| MvaI | CCWGG | 2 cut(s) | 251, 305 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 245, 317 |
| NarI | GGCGCC | 1 cut(s) | 15 |
| NdeII | GATC | 2 cut(s) | 46, 427 |
| NlaIII | CATG | 3 cut(s) | 243, 404, 440 |
| NlaIV | GGNNCC | 1 cut(s) | 16 |
| NspI | RCATGY | 1 cut(s) | 243 |
| PaeI | GCATGC | 1 cut(s) | 243 |
| PciSI | GCTCTTC | 1 cut(s) | 435 |
| PdmI | GAANNNNTTC | 1 cut(s) | 29 |
| PfeI | GAWTC | 1 cut(s) | 330 |
| PkrI | GCNGC | 3 cut(s) | 114, 182, 310 |
| PluTI | GGCGCC | 1 cut(s) | 18 |
| PpuMI | RGGWCCY | 1 cut(s) | 394 |
| Psp5II | RGGWCCY | 1 cut(s) | 394 |
| Psp6I | CCWGG | 2 cut(s) | 249, 303 |
| PspGI | CCWGG | 2 cut(s) | 249, 303 |
| PspN4I | GGNNCC | 1 cut(s) | 16 |
| PspPI | GGNCC | 1 cut(s) | 394 |
| PspPPI | RGGWCCY | 1 cut(s) | 394 |
| PsuI | RGATCY | 1 cut(s) | 427 |
| RsaI | GTAC | 1 cut(s) | 383 |
| RsaNI | GTAC | 1 cut(s) | 382 |
| SapI | GCTCTTC | 1 cut(s) | 435 |
| SatI | GCNGC | 3 cut(s) | 113, 181, 309 |
| Sau3AI | GATC | 2 cut(s) | 46, 427 |
| Sau96I | GGNCC | 1 cut(s) | 394 |
| ScrFI | CCNGG | 2 cut(s) | 251, 305 |
| SetI | ASST | 2 cut(s) | 295, 399 |
| SfoI | GGCGCC | 1 cut(s) | 16 |
| SinI | GGWCC | 1 cut(s) | 394 |
| SmlI | CTYRAG | 1 cut(s) | 458 |
| SmoI | CTYRAG | 1 cut(s) | 458 |
| SphI | GCATGC | 1 cut(s) | 243 |
| Sse9I | AATT | 1 cut(s) | 25 |
| SspDI | GGCGCC | 1 cut(s) | 14 |
| SspI | AATATT | 1 cut(s) | 210 |
| StyD4I | CCNGG | 2 cut(s) | 249, 303 |
| TaaI | ACNGT | 2 cut(s) | 143, 191 |
| TasI | AATT | 1 cut(s) | 25 |
| TatI | WGTACW | 1 cut(s) | 381 |
| TfiI | GAWTC | 1 cut(s) | 330 |
| TscAI | CASTG | 2 cut(s) | 40, 146 |
| TseI | GCWGC | 3 cut(s) | 112, 180, 308 |
| TspDTI | ATGAA | 3 cut(s) | 18, 389, 453 |
| TspGWI | ACGGA | 1 cut(s) | 184 |
| TspRI | CASTG | 2 cut(s) | 40, 146 |
| VpaK11BI | GGWCC | 1 cut(s) | 394 |
| XapI | RAATTY | 1 cut(s) | 25 |
| XceI | RCATGY | 1 cut(s) | 243 |
| XmnI | GAANNNNTTC | 1 cut(s) | 29 |