Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0003593

Physical Location & Seq

Genomic Coordinates Reverse (-)

3446977 .. 3452312

Gene Structure 5336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00281060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGCTTCCAACAACCCCGACCTCACCAAAACCCCTAAACGCCGCTCCAACACATCGCGAAAGGTCCGACTCGTGGCGAAGATCGGCGGCGTTGCAGATCCCGCGGCCGAGACTTCCGGTGGGGTGTCGTGGATCTCGGTGAACAAGCCCGCCGGAGAGGCGTCGGACAGTGTCACTCTCTCCTTCAGAGACCAATCAGCGAGCCGTAAAGAGTCCTATGAATTGGACTATTGCTATGACCAAAATGAGGATAATGGCCTAATTTTTTCGCGAGAAGTAAAGCCTTTAATTCCTGGAGTTCTGGAGGGCTGTAATGCCACTGTCATTGGTTTGGGAGCTAGAGGTAGTGGAAAGACTAGCTTAATTCAGGGTTCAAGTGAGAAACCTGGTTTGGCAACAATGGCAACCGATGAAATTATTTCAATGGCTGAGAAAAACAGATGTTCAATTACTATATCCTCATATGAGGTTTATCAGGACCACATTTATGATATATTGGATCCATCACGCCCAGAAGTTTTGGTTCTGGGAGACACTCAAGGAAACATTCGGCTTAAAGGACTTTCTCAGGTGCCTGTGAAGTCCATGTTGGAATTTAGCAAACTGTATGTTAGTGGGGGTACTTCCCGTAAACCAGCACCAAAGGGACCAGCTGAACTTTCTCGTAGGTGCCACAAGGGATTGATAGTATATGTATCATCTCAAAAAGAAAATTCAGATACCCTTCAAGTCAGCAAGTTAAACTTTATTGACTTAGCAGGTTATGAAGATACAAGAAGGAAGAGCATTGACTGCGTTAATCATGTTGAGAGCAGTAAAATCAATAAGTCAATCTATGCCATGATCAATGTTGTTAATGCAGTGAGTTCCAATGGAAGCCATGTGCCTTATCGAGAAAGCAAACTCACACATTTATTGCAAGACTCCCTGGGAGGGATGAGTAGAGTTTTGACGATTACTTGCTTGAAACTGTCATTTTGCCAAGATTCTATTTACATGGTAAGCTTGGTGTCTCGCTCTTCTCAAAACACCAATCAGGCTGTCACAGTCTCAACAAAGAAAATTAAAGGTCTGACAAGATCAGAAGTGCGTTCATCACAGAAGGGCCATGTATCCATGACTACTTCTGCTATAGCAAAGAAACAAACTGTCTCCCGAGTGCCTCTTTCTGAGAAGAAAGTCAATGGGCCGCCTCTTTCTTCCAAGAAAGCAAATAGTAGTATGACTTCTGCGTTGAAAGGAAGGAAACTATTTGATGAAAGAAGTCGTTTGACCAAATCGATGAAGGCAAGTGCTATGTCAGATATTGTCTCAACCATTGAAACTTCTGTAGCTGATACGGAAGAGACCATTTCAAATGTTCCTGAAGGAACCGAGCAGCTTAAATCTGAGAATCCATCATCAAATGCTTTGAATCCCGTAGAACCTGCATCTCTTGTGGAAAAGGACGAATTATTATCAGATGATCCAAAGCATGCAGAACATTCTTTGAAGGAAGAAAAGGAGCATTTGCTATTGGATGATCCAAAGCATGCTGAAGATAATTCAATTGCAGAAAAGGATGTTTCTGTGAATGGTGATGGCCCTACTGAGGAAGTTAATCCTAGTGACAATAGCAGTAGCAGATATGCATTGGCTTTAGTTGAAGAAGTTCATGACATGGAGAAGGAAAACAATAACTTCCCAGACAACGAAGATGCATCACCTCCAATCAGTGCACGTTTACAAGAATTGGCATTAAAAATGAAATCACTTTGTTCTTCAACTCCATTGTGCATTACGATGCCAGAGGAGAAAGATACTTCATTCAATAACTTCCTCTGTACTGACATCGTGGAATCAAACGCCCCAGTTGCCAGTCAGGATATAAGCCACAATGATAGTTGGGAGACTGCAAATGTCAACAACATCATGGAACCAAAGACTCCAGTTGAGGAACCAAAAACCCCAGTTGCTAATCAGGATATAAAACACAATGACAGAAGGGAGGTTGCAAATGTCAACAGCCCTTGGGAAACGTTGAGTGTCCGCAGTACTGGTGTCAAGCAATCTCTTGTTCAAGAATATCTTAGCTTCTTAAACACAGCTAGCAAGGAAGATCTGAAAAGATTAAAGGGAATTGGGGAGAAAAGAGCAACATACATACTTGATTGCCGTGAAGAAACTCCTGAGCCCTTCAAGAGTCTTGATGATTTACAAGACATTGGACTTTCAGTGAAGCAGATTAAGAACTTGATGAAGAAAGCTGGAGGAGGGCTTTTCGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005875 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007049 GO:0007059 GO:0007062 GO:0007080 GO:0008104 GO:0008150 GO:0008574 GO:0009987 GO:0015630 GO:0016043 GO:0016192 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0030705 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0042623 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046907 GO:0048002 GO:0048193 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070013 GO:0071840 GO:0072686 GO:0097159 GO:0098687 GO:0098813 GO:0140014 GO:1901363 GO:1903047 GO:1990939

KEGG Pathways

Metabolic & Signaling

ko04914 map04914

Pfam Domains

Protein Families

HHH_3 Kinesin

Protein Analysis

755

Amino Acids

82.55

Weight (kDa)

5.88

Isoelectric Point (pI)

49.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	56 - 325	8.9e-59	Kinesin motor domain
Microtub_bd	PF16796	61 - 166	3.5e-09	Microtubule binding
HHH_3	PF12836	693 - 735	1.5e-07	Helix-hairpin-helix motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003593)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23910 AT5G23910
fragaria_vesca	FvH4_3g27740 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790
malus_domestica	MD01G1204800.v1.1 MD07G1272100.v1.1
prunus_persica	Prupe.2G297200_v2.0.a1
pyrus_communis	pycom01g21440
rosa_chinensis	RchiOBHm_Chr1g0377791
rosa_laevigata	RLG00000019998 RLG00000026498
rosa_multiflora	Rmu_sc0004824.1_g000001 Rmu_sc0005758.1_g000004 Rmu_sc0024583.1_g000001 Rmu_sc0028648.1_g000003
rosa_roxburghii	Rroxscaffold_4G00281060
rosa_rugosa	Rorug01G0405100 Rorug02G0377300
rosa_samantha	Rh1AG427300 Rh1BG382000 Rh1CG395900 Rh1DG413000 Rh2AG430200 Rh2BG439200 Rh2CG415800 Rh2DG449200
rosa_wichuraiana	Rw1G037130 Rw2G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	749, 1435
AccB1I	GGYRCC	2 cut(s)	571, 669
AccBSI	CCGCTC	1 cut(s)	45
AccII	CGCG	3 cut(s)	58, 104, 271
AciI	CCGC	7 cut(s)	43, 87, 102, 104, 150, 1190, 2029
AclI	AACGTT	1 cut(s)	2018
AclWI	GGATC	6 cut(s)	92, 140, 494, 507, 1460, 1517
AcoI	YGGCCR	1 cut(s)	105
AcsI	RAATTY	2 cut(s)	593, 712
AcuI	CTGAAG	3 cut(s)	169, 1386, 1557
AcyI	GRCGYC	1 cut(s)	161
AfaI	GTAC	3 cut(s)	622, 1825, 2035
AfiI	CCNNNNNNNGG	4 cut(s)	73, 247, 933, 1591
AjnI	CCWGG	3 cut(s)	292, 385, 927
AjuI	GAANNNNNNNTTGG	4 cut(s)	374, 406, 572, 604
AluBI	AGCT	9 cut(s)	338, 360, 653, 1005, 1334, 1381, 2073, 2087, 2246
AluI	AGCT	9 cut(s)	338, 360, 653, 1005, 1334, 1381, 2073, 2087, 2246
Alw21I	GWGCWC	1 cut(s)	1720
Alw26I	GTCTC	9 cut(s)	104, 183, 525, 1017, 1054, 1156, 1315, 1340, 1883
Alw44I	GTGCAC	1 cut(s)	1716
AlwI	GGATC	6 cut(s)	92, 140, 494, 507, 1460, 1517
Ama87I	CYCGRG	1 cut(s)	1155
AoxI	GGCC	5 cut(s)	105, 256, 1105, 1187, 1582
ApaLI	GTGCAC	1 cut(s)	1716
ApeKI	GCWGC	1 cut(s)	1378
ApoI	RAATTY	2 cut(s)	593, 712
Asp700I	GAANNNNTTC	1 cut(s)	1650
AspS9I	GGNCC	6 cut(s)	64, 478, 647, 1105, 1187, 1583
AsuHPI	GGTGA	4 cut(s)	16, 151, 1589, 1695
AsuNHI	GCTAGC	1 cut(s)	2087
AvaI	CYCGRG	1 cut(s)	1155
AvaII	GGWCC	3 cut(s)	64, 478, 647
BaeGI	GKGCMC	1 cut(s)	1720
BamHI	GGATCC	1 cut(s)	499
BanI	GGYRCC	2 cut(s)	571, 669
BanII	GRGCYC	1 cut(s)	2175
BarI	GAAGNNNNNNTAC	2 cut(s)	1210, 1242
BauI	CACGAG	1 cut(s)	71
Bbv12I	GWGCWC	1 cut(s)	1720
BbvI	GCAGC	1 cut(s)	1390
BccI	CCATC	3 cut(s)	511, 1405, 1574
BceAI	ACGGC	2 cut(s)	189, 2139
BciT130I	CCWGG	3 cut(s)	294, 387, 929
BciVI	GTATCC	1 cut(s)	1123
BclI	TGATCA	1 cut(s)	843
BcoDI	GTCTC	9 cut(s)	104, 183, 525, 1017, 1054, 1156, 1315, 1340, 1883
BfaI	CTAG	4 cut(s)	339, 357, 1605, 2088
BfmI	CTRYAG	2 cut(s)	1131, 1329
BfuAI	ACCTGC	2 cut(s)	749, 1435
BfuI	GTATCC	1 cut(s)	1123
BglI	GCCNNNNNGGC	1 cut(s)	158
BglII	AGATCT	1 cut(s)	2098
BisI	GCNGC	5 cut(s)	43, 88, 105, 1190, 1379
BlsI	GCNGC	5 cut(s)	44, 89, 106, 1191, 1380
BmcAI	AGTACT	1 cut(s)	2035
Bme1390I	CCNGG	3 cut(s)	294, 387, 929
Bme18I	GGWCC	3 cut(s)	64, 478, 647
BmeT110I	CYCGRG	1 cut(s)	1155
BmgT120I	GGNCC	6 cut(s)	64, 478, 647, 1105, 1187, 1583
BmiI	GGNNCC	7 cut(s)	501, 573, 648, 671, 1372, 1917, 1938
BmrFI	CCNGG	3 cut(s)	294, 387, 929
BmrI	ACTGGG	2 cut(s)	1844, 1943
BmsI	GCATC	4 cut(s)	1439, 1687, 1709, 1773
BmtI	GCTAGC	1 cut(s)	2091
BmuI	ACTGGG	2 cut(s)	1844, 1943
BpmI	CTGGAG	4 cut(s)	315, 323, 1911, 2268
Bpu10I	CCTNAGC	1 cut(s)	2169
BpuEI	CTTGAG	1 cut(s)	522
Bsa29I	ATCGAT	1 cut(s)	1280
BsaHI	GRCGYC	1 cut(s)	161
BsaI	GGTCTC	2 cut(s)	183, 1340
BsaJI	CCNNGG	4 cut(s)	102, 927, 928, 2009
BsaWI	WCCGGW	1 cut(s)	116
Bsc4I	CCNNNNNNNGG	4 cut(s)	73, 247, 933, 1591
Bse1I	ACTGG	5 cut(s)	1850, 1857, 1928, 1949, 2041
BseBI	CCWGG	3 cut(s)	294, 387, 929
BseCI	ATCGAT	1 cut(s)	1280
BseDI	CCNNGG	4 cut(s)	102, 927, 928, 2009
BseGI	GGATG	3 cut(s)	942, 1525, 1567
BseLI	CCNNNNNNNGG	4 cut(s)	73, 247, 933, 1591
BseMII	CTCAG	6 cut(s)	420, 581, 1161, 1380, 1581, 2160
BseNI	ACTGG	5 cut(s)	1850, 1857, 1928, 1949, 2041
BseRI	GAGGAG	2 cut(s)	1805, 2265
BseSI	GKGCMC	1 cut(s)	1720
BseX3I	CGGCCG	1 cut(s)	105
BseXI	GCAGC	1 cut(s)	1390
Bsh1236I	CGCG	3 cut(s)	58, 104, 271
Bsh1285I	CGRYCG	1 cut(s)	108
BshFI	GGCC	5 cut(s)	107, 258, 1107, 1189, 1584
BshNI	GGYRCC	2 cut(s)	571, 669
BshVI	ATCGAT	1 cut(s)	1280
BsiEI	CGRYCG	1 cut(s)	108
BsiHKAI	GWGCWC	1 cut(s)	1720
BsiHKCI	CYCGRG	1 cut(s)	1155
BsiSI	CCGG	2 cut(s)	117, 153
BslFI	GGGAC	1 cut(s)	660
BslI	CCNNNNNNNGG	4 cut(s)	73, 247, 933, 1591
BsmAI	GTCTC	9 cut(s)	104, 183, 525, 1017, 1054, 1156, 1315, 1340, 1883
BsmFI	GGGAC	1 cut(s)	660
BsnI	GGCC	5 cut(s)	107, 258, 1107, 1189, 1584
Bso31I	GGTCTC	2 cut(s)	183, 1340
BsoBI	CYCGRG	1 cut(s)	1155
Bsp1286I	GDGCHC	2 cut(s)	1720, 2175
Bsp143I	GATC	9 cut(s)	81, 97, 132, 499, 843, 1079, 1465, 1522, 2098
Bsp68I	TCGCGA	2 cut(s)	58, 271
BspACI	CCGC	7 cut(s)	43, 87, 102, 104, 150, 1190, 2029
BspANI	GGCC	5 cut(s)	107, 258, 1107, 1189, 1584
BspCNI	CTCAG	6 cut(s)	421, 580, 1162, 1381, 1582, 2161
BspDI	ATCGAT	1 cut(s)	1280
BspFNI	CGCG	3 cut(s)	58, 104, 271
BspHI	TCATGA	1 cut(s)	1654
BspLI	GGNNCC	7 cut(s)	501, 573, 648, 671, 1372, 1917, 1938
BspMI	ACCTGC	2 cut(s)	749, 1435
BspOI	GCTAGC	1 cut(s)	2091
BspPI	GGATC	6 cut(s)	92, 140, 494, 507, 1460, 1517
BspQI	GCTCTTC	2 cut(s)	776, 1024
BspT107I	GGYRCC	2 cut(s)	571, 669
BspTNI	GGTCTC	2 cut(s)	183, 1340
BsrBI	CCGCTC	1 cut(s)	45
BsrI	ACTGG	5 cut(s)	1850, 1857, 1928, 1949, 2041
BssECI	CCNNGG	4 cut(s)	102, 927, 928, 2009
BssMI	GATC	9 cut(s)	81, 97, 132, 499, 843, 1079, 1465, 1522, 2098
BssNI	GRCGYC	1 cut(s)	161
BssSI	CACGAG	1 cut(s)	71
BssT1I	CCWWGG	1 cut(s)	2009
Bst2BI	CACGAG	1 cut(s)	71
Bst2UI	CCWGG	3 cut(s)	294, 387, 929
Bst4CI	ACNGT	6 cut(s)	170, 322, 606, 972, 1048, 1150
Bst6I	CTCTTC	3 cut(s)	776, 1024, 1338
BstACI	GRCGYC	1 cut(s)	161
BstAPI	GCANNNNNTGC	1 cut(s)	792
BstC8I	GCNNGC	5 cut(s)	150, 202, 1476, 1533, 2089
BstDEI	CTNAG	8 cut(s)	429, 567, 754, 1170, 1389, 1590, 2069, 2169
BstDSI	CCRYGG	1 cut(s)	102
BstF5I	GGATG	3 cut(s)	942, 1525, 1567
BstFNI	CGCG	3 cut(s)	58, 104, 271
BstKTI	GATC	9 cut(s)	84, 100, 135, 502, 846, 1082, 1468, 1525, 2101
BstMAI	GTCTC	9 cut(s)	104, 183, 525, 1017, 1054, 1156, 1315, 1340, 1883
BstMBI	GATC	9 cut(s)	81, 97, 132, 499, 843, 1079, 1465, 1522, 2098
BstMCI	CGRYCG	1 cut(s)	108
BstMWI	GCNNNNNNNGC	5 cut(s)	101, 158, 401, 792, 1853
BstNI	CCWGG	3 cut(s)	294, 387, 929
BstNSI	RCATGY	2 cut(s)	1478, 1535
BstSCI	CCNGG	3 cut(s)	292, 385, 927
BstSFI	CTRYAG	2 cut(s)	1131, 1329
BstSLI	GKGCMC	1 cut(s)	1720
BstUI	CGCG	3 cut(s)	58, 104, 271
BstV1I	GCAGC	1 cut(s)	1390
BstX2I	RGATCY	4 cut(s)	97, 132, 499, 2098
BstYI	RGATCY	4 cut(s)	97, 132, 499, 2098
BstZI	CGGCCG	1 cut(s)	105
Bsu15I	ATCGAT	1 cut(s)	1280
BsuI	GTATCC	1 cut(s)	1123
BsuRI	GGCC	5 cut(s)	107, 258, 1107, 1189, 1584
BsuTUI	ATCGAT	1 cut(s)	1280
BtgI	CCRYGG	1 cut(s)	102
BtgZI	GCGATG	1 cut(s)	39
BtsCI	GGATG	3 cut(s)	942, 1525, 1567
BtsI	GCAGTG	1 cut(s)	867
BtsIMutI	CAGTG	5 cut(s)	175, 318, 867, 1720, 2220
BtuMI	TCGCGA	2 cut(s)	58, 271
BveI	ACCTGC	2 cut(s)	749, 1435
Cac8I	GCNNGC	5 cut(s)	150, 202, 1476, 1533, 2089
CciI	TCATGA	1 cut(s)	1654
Cfr13I	GGNCC	6 cut(s)	64, 478, 647, 1105, 1187, 1583
Cfr42I	CCGCGG	1 cut(s)	105
ClaI	ATCGAT	1 cut(s)	1280
CseI	GACGC	1 cut(s)	150
CsiI	ACCWGGT	1 cut(s)	385
Csp6I	GTAC	3 cut(s)	621, 1824, 2034
CspCI	CAANNNNNGTGG	2 cut(s)	307, 342
CviQI	GTAC	3 cut(s)	621, 1824, 2034
DdeI	CTNAG	8 cut(s)	429, 567, 754, 1170, 1389, 1590, 2069, 2169
DpnI	GATC	9 cut(s)	83, 99, 134, 501, 845, 1081, 1467, 1524, 2100
DpnII	GATC	9 cut(s)	81, 97, 132, 499, 843, 1079, 1465, 1522, 2098
EaeI	YGGCCR	1 cut(s)	105
EagI	CGGCCG	1 cut(s)	105
Eam1104I	CTCTTC	3 cut(s)	776, 1024, 1338
EarI	CTCTTC	3 cut(s)	776, 1024, 1338
EclXI	CGGCCG	1 cut(s)	105
Eco130I	CCWWGG	1 cut(s)	2009
Eco24I	GRGCYC	1 cut(s)	2175
Eco31I	GGTCTC	2 cut(s)	183, 1340
Eco47I	GGWCC	3 cut(s)	64, 478, 647
Eco52I	CGGCCG	1 cut(s)	105
Eco57I	CTGAAG	3 cut(s)	169, 1386, 1557
Eco88I	CYCGRG	1 cut(s)	1155
EcoRII	CCWGG	3 cut(s)	292, 385, 927
EcoT14I	CCWWGG	1 cut(s)	2009
EcoT22I	ATGCAT	2 cut(s)	1633, 1702
EcoT38I	GRGCYC	1 cut(s)	2175
ErhI	CCWWGG	1 cut(s)	2009
FalI	AAGNNNNNCTT	6 cut(s)	344, 376, 728, 760, 2052, 2084
FaqI	GGGAC	1 cut(s)	660
FauI	CCCGC	2 cut(s)	109, 157
FauNDI	CATATG	1 cut(s)	463
FbaI	TGATCA	1 cut(s)	843
Fnu4HI	GCNGC	5 cut(s)	43, 88, 105, 1190, 1379
FokI	GGATG	3 cut(s)	949, 1532, 1574
FriOI	GRGCYC	1 cut(s)	2175
Fsp4HI	GCNGC	5 cut(s)	43, 88, 105, 1190, 1379
FspBI	CTAG	4 cut(s)	339, 357, 1605, 2088
GluI	GCNGC	5 cut(s)	43, 88, 105, 1190, 1379
GsuI	CTGGAG	4 cut(s)	315, 323, 1911, 2268
HaeIII	GGCC	5 cut(s)	107, 258, 1107, 1189, 1584
HapII	CCGG	2 cut(s)	117, 153
HgaI	GACGC	1 cut(s)	150
Hin1I	GRCGYC	1 cut(s)	161
HincII	GTYRAC	2 cut(s)	1903, 2002
HindII	GTYRAC	2 cut(s)	1903, 2002
HindIII	AAGCTT	1 cut(s)	1003
HinfI	GANTC	9 cut(s)	69, 212, 923, 986, 1393, 1414, 1838, 1924, 2182
HpaII	CCGG	2 cut(s)	117, 153
HphI	GGTGA	4 cut(s)	16, 151, 1589, 1695
Hpy166II	GTNNAC	6 cut(s)	142, 632, 1718, 1724, 1903, 2002
Hpy8I	GTNNAC	6 cut(s)	142, 632, 1718, 1724, 1903, 2002
Hpy99I	CGWCG	1 cut(s)	166
HpyCH4III	ACNGT	6 cut(s)	170, 322, 606, 972, 1048, 1150
HpyCH4IV	ACGT	2 cut(s)	1720, 2018
HpyF10VI	GCNNNNNNNGC	5 cut(s)	101, 158, 401, 792, 1853
HpyF3I	CTNAG	8 cut(s)	429, 567, 754, 1170, 1389, 1590, 2069, 2169
HpySE526I	ACGT	2 cut(s)	1720, 2018
Hsp92I	GRCGYC	1 cut(s)	161
Ksp22I	TGATCA	1 cut(s)	843
KspI	CCGCGG	1 cut(s)	105
Kzo9I	GATC	9 cut(s)	81, 97, 132, 499, 843, 1079, 1465, 1522, 2098
LguI	GCTCTTC	2 cut(s)	776, 1024
LmnI	GCTCC	3 cut(s)	50, 335, 1504
Lsp1109I	GCAGC	1 cut(s)	1390
LweI	GCATC	4 cut(s)	1439, 1687, 1709, 1773
MabI	ACCWGGT	1 cut(s)	385
MaeI	CTAG	4 cut(s)	339, 357, 1605, 2088
MaeII	ACGT	2 cut(s)	1720, 2018
MaeIII	GTNAC	3 cut(s)	172, 1042, 1607
MalI	GATC	9 cut(s)	83, 99, 134, 501, 845, 1081, 1467, 1524, 2100
MbiI	CCGCTC	1 cut(s)	45
MboI	GATC	9 cut(s)	81, 97, 132, 499, 843, 1079, 1465, 1522, 2098
MfeI	CAATTG	1 cut(s)	1548
MflI	RGATCY	4 cut(s)	97, 132, 499, 2098
MhlI	GDGCHC	2 cut(s)	1720, 2175
MlyI	GAGTC	5 cut(s)	63, 221, 917, 1918, 2191
MmeI	TCCRAC	5 cut(s)	33, 72, 91, 144, 570
Mph1103I	ATGCAT	2 cut(s)	1633, 1702
MroXI	GAANNNNTTC	1 cut(s)	1650
MslI	CAYNNNNRTG	2 cut(s)	486, 1781
MspA1I	CMGCKG	2 cut(s)	104, 653
MspI	CCGG	2 cut(s)	117, 153
MspR9I	CCNGG	3 cut(s)	294, 387, 929
MunI	CAATTG	1 cut(s)	1548
MvaI	CCWGG	3 cut(s)	294, 387, 929
MvnI	CGCG	3 cut(s)	58, 104, 271
MwoI	GCNNNNNNNGC	5 cut(s)	101, 158, 401, 792, 1853
NdeI	CATATG	1 cut(s)	463
NdeII	GATC	9 cut(s)	81, 97, 132, 499, 843, 1079, 1465, 1522, 2098
NheI	GCTAGC	1 cut(s)	2087
NlaIV	GGNNCC	7 cut(s)	501, 573, 648, 671, 1372, 1917, 1938
NmeAIII	GCCGAG	1 cut(s)	133
NmuCI	GTSAC	3 cut(s)	172, 1042, 1607
NruI	TCGCGA	2 cut(s)	58, 271
NsiI	ATGCAT	2 cut(s)	1633, 1702
NspI	RCATGY	2 cut(s)	1478, 1535
PaeI	GCATGC	2 cut(s)	1478, 1535
PagI	TCATGA	1 cut(s)	1654
PasI	CCCWGGG	1 cut(s)	928
PciSI	GCTCTTC	2 cut(s)	776, 1024
PdmI	GAANNNNTTC	1 cut(s)	1650
PfeI	GAWTC	4 cut(s)	986, 1393, 1414, 1838
PflFI	GACNNNGTC	1 cut(s)	170
PfoI	TCCNGGA	1 cut(s)	292
PkrI	GCNGC	5 cut(s)	44, 89, 106, 1191, 1380
PleI	GAGTC	5 cut(s)	63, 220, 917, 1918, 2190
PpsI	GAGTC	5 cut(s)	63, 220, 917, 1918, 2190
Psp1406I	AACGTT	1 cut(s)	2018
Psp6I	CCWGG	3 cut(s)	292, 385, 927
PspGI	CCWGG	3 cut(s)	292, 385, 927
PspN4I	GGNNCC	7 cut(s)	501, 573, 648, 671, 1372, 1917, 1938
PspPI	GGNCC	6 cut(s)	64, 478, 647, 1105, 1187, 1583
PsuI	RGATCY	4 cut(s)	97, 132, 499, 2098
PsyI	GACNNNGTC	1 cut(s)	170
PvuII	CAGCTG	1 cut(s)	653
RruI	TCGCGA	2 cut(s)	58, 271
RsaI	GTAC	3 cut(s)	622, 1825, 2035
RsaNI	GTAC	3 cut(s)	621, 1824, 2034
RseI	CAYNNNNRTG	2 cut(s)	486, 1781
SacII	CCGCGG	1 cut(s)	105
SapI	GCTCTTC	2 cut(s)	776, 1024
SatI	GCNGC	5 cut(s)	43, 88, 105, 1190, 1379
Sau3AI	GATC	9 cut(s)	81, 97, 132, 499, 843, 1079, 1465, 1522, 2098
Sau96I	GGNCC	6 cut(s)	64, 478, 647, 1105, 1187, 1583
ScaI	AGTACT	1 cut(s)	2035
SchI	GAGTC	5 cut(s)	63, 221, 917, 1918, 2191
ScrFI	CCNGG	3 cut(s)	294, 387, 929
SduI	GDGCHC	2 cut(s)	1720, 2175
SexAI	ACCWGGT	1 cut(s)	385
SfaNI	GCATC	4 cut(s)	1439, 1687, 1709, 1773
SfcI	CTRYAG	2 cut(s)	1131, 1329
Sfr303I	CCGCGG	1 cut(s)	105
SgrBI	CCGCGG	1 cut(s)	105
SinI	GGWCC	3 cut(s)	64, 478, 647
SmiMI	CAYNNNNRTG	2 cut(s)	486, 1781
SmlI	CTYRAG	1 cut(s)	537
SmoI	CTYRAG	1 cut(s)	537
SphI	GCATGC	2 cut(s)	1478, 1535
SsiI	CCGC	7 cut(s)	43, 87, 102, 104, 150, 1190, 2029
SspMI	CTAG	4 cut(s)	339, 357, 1605, 2088
StyD4I	CCNGG	3 cut(s)	292, 385, 927
StyI	CCWWGG	1 cut(s)	2009
TaaI	ACNGT	6 cut(s)	170, 322, 606, 972, 1048, 1150
TaiI	ACGT	2 cut(s)	1723, 2021
TaqI	TCGA	3 cut(s)	892, 1280, 2262
TatI	WGTACW	2 cut(s)	1823, 2033
TauI	GCSGC	4 cut(s)	45, 90, 107, 1192
TfiI	GAWTC	4 cut(s)	986, 1393, 1414, 1838
TscAI	CASTG	5 cut(s)	175, 325, 867, 1720, 2220
TseFI	GTSAC	3 cut(s)	172, 1042, 1607
TseI	GCWGC	1 cut(s)	1378
Tsp45I	GTSAC	3 cut(s)	172, 1042, 1607
TspGWI	ACGGA	1 cut(s)	1355
TspRI	CASTG	5 cut(s)	175, 325, 867, 1720, 2220
Tth111I	GACNNNGTC	1 cut(s)	170
VneI	GTGCAC	1 cut(s)	1716
VpaK11BI	GGWCC	3 cut(s)	64, 478, 647
XapI	RAATTY	2 cut(s)	593, 712
XceI	RCATGY	2 cut(s)	1478, 1535
XmnI	GAANNNNTTC	1 cut(s)	1650
XspI	CTAG	4 cut(s)	339, 357, 1605, 2088
ZrmI	AGTACT	1 cut(s)	2035
Zsp2I	ATGCAT	2 cut(s)	1633, 1702

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.