Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0003593

Physical Location & Seq

Genomic Coordinates Forward (+)

51075520 .. 51082609

Gene Structure 7090 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG382000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGCTTCCAACAACCCCGACCTCACCAAAACCCCTAAACGCCGCTCCAACACATCGCGAAAGGTCCGACTCGTGGCGAAGATCGGCGGCGTTGCAGATCCGGCGGCCGAGGTTTCCGGTGGGGTGTCGTGGATCTCGGTGAACAAGCCCGCCGGAGAGGCGTCGGACAGTGTCACTCTCTCCTTCAGAGACCAATCAGCGAGCCGTAAAGAGTCTTGTGAATTGGACAATTGCTATGACCAAAATGAGGATAATGGCCTAATTTTTTTGAGAGAAGTAAAACCTTTAATTCCTGGAGTTCTGGAGGGCTGTAATGCCACTGTCATTGCTTTGGGAGCTAGAGGTAGTGGAAAGACTAGCTTAATTCAGGGTTCGAGTGAGAAACCAGGTTTGGCAACAATGGCAACCGATGAAATTATTTCAATGGCTGAGAAAAACGGATGTTCAATTACTATATCCTCATATGAGGTTTATCAGGACCACATTTATGATATATTGGATCCATCACGCCCAGAAGTTTTGGTTCTGGGAGACACTCAAGGAAACATTCGGCTTAAAGGACTTTCTCAGGTGCCTGTGAAGTCCATGTTGGAATTTAGCAAACTGTATGTTAGTGGGGGTACTTCCCGTAAACCAGCACCAAAGGGACCAGCTGAACTTTCTCGTAGGTGCCACAAGGGATTGATAGTATATGTATCATCTCAAAGAGAAAATTCAGATACCCTTCAAGTCAGCAAGTTAAACTTTATTGACTTAGCAGGTTATGAAGATACAAGAAGGAAGAGCATTGACTGCTTTAATCATGTTGAGAGCAGTAAAATCAATAAGTCAATCTATGCCATGATCAATGTAGTCAATGCAGTGAGTTCCAATGGAAACCATGTGCCTTATCGGGAAAGCAAACTCACACATTTATTGCAAGACTCCCTGGGAGGGATGAGTAGAGTTCTGACGATCACTTGCTTGAAACCGTCATTTTGCCAAGATTCTATTTACATGGTAAGCTTGGTGTCTCGCTCTTCTCAAAACACCAATCAGGCTGTCACAGTCTCAACAAAGAAAATTAAAGGTCTGACAAGATCAGAAATGCGTTCATCACAGAAGGGCCATGTATCCATGACTACTTCTGCTATAGCAAAGAAACAAATTGTCTCCCGAGTGCCTCTTTCTGAGAAGAAAGTCAATGGGCCTCTTTCTTCCAAGAAAGCAAATAGTAGTATGACTTCCGCATTGAAAGGAAGGAAACTATTTGATGAAAGAAGTCGTTTGACCAAATCGATGAAGGCAAGTGCTATGTCAGATATTGTCTCAACCATTGAAACTTCTGTAGCTGATAAGGAAGAGACCATTTCAAATGTTCCTGAAGGAACCGAGCAGCTTAAATCTGAGAATCCATCATCAAATGCTTTGAATCCCGTAGAACCTGCATCTCTTGTGGAAAAGGACGAATTATTATCAGATGATCCAAAGCATGCAGAACATTCTTTGAAGGAAGAAAAGGAGCATTTGCTATTGGATGATCCAAAGCATGCTGAAGATAATTCAATTGCAGAAAAGGATGTTTCTGTGAATGGTGATGGCCCTACTGAGGAAGTTAATCCTAGTGACAATAGCAGTAGCAGATATGCATTGGCTTTAGTTGAAGAAGTTCATGACATGGAGAAGGAAAACAATAACTTCCCAGACAATGAAGATGCATCACCTCCAATCAGTGCACGATTACAAGAATTGGCATTAAAAATGAAATCACTTTGTTCTTCAACTCCATTGTGCATTACGATGCCAGAGGAGAAAGATACTTCATCCAATAACTTCCTCTGTACTGACATCGTGGAATCAAACGCCCCAGTTGCCAGTCAGGATATAAGCCACAATGATAGTTGGGAGGTTGCAAATGTCAACAACATCATGGAACCAAAGACTCCAGTTGTGGAACCAAAAACCCCAGTTGCTAATCAGGATATAAAACACAATGACAGATGGGAGGTTGCAAATGTCAACAGCCCTTGGGAAACGTTGAGTGTCCGCAGTACTGGTGTCAAGCAATGTCTTGTTCAAGAATATCTTAGCTTCTTAAACACCGCTAGCAAGGAAGATCTGAAAAGATTAAAGGGAATTGGAGAGAAAAGAGCAACATACATACTGGATTGCCGTGAAGAAACTCCTGAGCCCTTCAAGAGTCTTGATGATTTACAAGACATTGGACTTTCAGTGAAGCAGGTACCTCCTTATTTTCTTTCATTAAGAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000070 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005875 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007049 GO:0007059 GO:0007062 GO:0007080 GO:0008104 GO:0008150 GO:0008574 GO:0009987 GO:0015630 GO:0016043 GO:0016192 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0030705 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0042623 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046907 GO:0048002 GO:0048193 GO:0048285 GO:0050000 GO:0051179 GO:0051234 GO:0051276 GO:0051303 GO:0051310 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070013 GO:0071840 GO:0072686 GO:0097159 GO:0098687 GO:0098813 GO:0140014 GO:1901363 GO:1903047 GO:1990939

KEGG Pathways

Metabolic & Signaling

ko04914 map04914

Pfam Domains

Protein Families

HHH_3 Kinesin

Protein Analysis

750

Amino Acids

82.09

Weight (kDa)

5.8

Isoelectric Point (pI)

48.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	57 - 325	1.6e-58	Kinesin motor domain
Microtub_bd	PF16796	61 - 166	2.5e-08	Microtubule binding
HHH_3	PF12836	692 - 734	1.9e-07	Helix-hairpin-helix motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003593)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23910 AT5G23910
fragaria_vesca	FvH4_3g27740 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790 FvH4_7g29790
malus_domestica	MD01G1204800.v1.1 MD07G1272100.v1.1
prunus_persica	Prupe.2G297200_v2.0.a1
pyrus_communis	pycom01g21440
rosa_chinensis	RchiOBHm_Chr1g0377791
rosa_laevigata	RLG00000019998 RLG00000026498
rosa_multiflora	Rmu_sc0004824.1_g000001 Rmu_sc0005758.1_g000004 Rmu_sc0024583.1_g000001 Rmu_sc0028648.1_g000003
rosa_roxburghii	Rroxscaffold_4G00281060
rosa_rugosa	Rorug01G0405100 Rorug02G0377300
rosa_samantha	Rh1AG427300 Rh1BG382000 Rh1CG395900 Rh1DG413000 Rh2AG430200 Rh2BG439200 Rh2CG415800 Rh2DG449200
rosa_wichuraiana	Rw1G037130 Rw2G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	749, 1432, 2209
Acc65I	GGTACC	1 cut(s)	2221
AccB1I	GGYRCC	3 cut(s)	571, 669, 2221
AccBSI	CCGCTC	1 cut(s)	45
AccII	CGCG	1 cut(s)	58
AciI	CCGC	7 cut(s)	43, 87, 104, 150, 1227, 2026, 2082
AclI	AACGTT	1 cut(s)	2015
AclWI	GGATC	6 cut(s)	92, 140, 494, 507, 1457, 1514
AcoI	YGGCCR	1 cut(s)	105
AcsI	RAATTY	2 cut(s)	593, 712
AcuI	CTGAAG	3 cut(s)	169, 1383, 1554
AcyI	GRCGYC	1 cut(s)	161
AfaI	GTAC	4 cut(s)	622, 1822, 2032, 2223
AfiI	CCNNNNNNNGG	4 cut(s)	73, 247, 933, 1588
AjnI	CCWGG	3 cut(s)	292, 385, 927
AjuI	GAANNNNNNNTTGG	4 cut(s)	374, 406, 572, 604
AluBI	AGCT	7 cut(s)	338, 360, 653, 1005, 1331, 1378, 2070
AluI	AGCT	7 cut(s)	338, 360, 653, 1005, 1331, 1378, 2070
Alw21I	GWGCWC	1 cut(s)	1717
Alw26I	GTCTC	7 cut(s)	183, 525, 1017, 1054, 1156, 1312, 1337
Alw44I	GTGCAC	1 cut(s)	1713
AlwI	GGATC	6 cut(s)	92, 140, 494, 507, 1457, 1514
Ama87I	CYCGRG	1 cut(s)	1155
AoxI	GGCC	5 cut(s)	105, 256, 1105, 1187, 1579
ApaLI	GTGCAC	1 cut(s)	1713
ApeKI	GCWGC	1 cut(s)	1375
ApoI	RAATTY	2 cut(s)	593, 712
Asp700I	GAANNNNTTC	1 cut(s)	1647
Asp718I	GGTACC	1 cut(s)	2221
AspS9I	GGNCC	6 cut(s)	64, 478, 647, 1105, 1187, 1580
AsuHPI	GGTGA	4 cut(s)	16, 151, 1586, 1692
AsuNHI	GCTAGC	1 cut(s)	2084
AvaI	CYCGRG	1 cut(s)	1155
AvaII	GGWCC	3 cut(s)	64, 478, 647
BaeGI	GKGCMC	1 cut(s)	1717
BamHI	GGATCC	1 cut(s)	499
BanI	GGYRCC	3 cut(s)	571, 669, 2221
BanII	GRGCYC	1 cut(s)	2172
BarI	GAAGNNNNNNTAC	2 cut(s)	1207, 1239
BauI	CACGAG	1 cut(s)	71
Bbv12I	GWGCWC	1 cut(s)	1717
BbvI	GCAGC	1 cut(s)	1387
BccI	CCATC	4 cut(s)	511, 1402, 1571, 1974
BceAI	ACGGC	2 cut(s)	189, 2136
BciT130I	CCWGG	3 cut(s)	294, 387, 929
BciVI	GTATCC	1 cut(s)	1123
BclI	TGATCA	1 cut(s)	843
BcoDI	GTCTC	7 cut(s)	183, 525, 1017, 1054, 1156, 1312, 1337
BfaI	CTAG	4 cut(s)	339, 357, 1602, 2085
BfmI	CTRYAG	2 cut(s)	1131, 1326
BfuAI	ACCTGC	3 cut(s)	749, 1432, 2209
BfuI	GTATCC	1 cut(s)	1123
BglI	GCCNNNNNGGC	1 cut(s)	158
BglII	AGATCT	1 cut(s)	2095
BisI	GCNGC	4 cut(s)	43, 88, 105, 1376
BlsI	GCNGC	4 cut(s)	44, 89, 106, 1377
BmcAI	AGTACT	1 cut(s)	2032
Bme1390I	CCNGG	3 cut(s)	294, 387, 929
Bme18I	GGWCC	3 cut(s)	64, 478, 647
BmeT110I	CYCGRG	1 cut(s)	1155
BmgT120I	GGNCC	6 cut(s)	64, 478, 647, 1105, 1187, 1580
BmiI	GGNNCC	8 cut(s)	501, 573, 648, 671, 1369, 1914, 1935, 2223
BmrFI	CCNGG	3 cut(s)	294, 387, 929
BmrI	ACTGGG	2 cut(s)	1841, 1940
BmsI	GCATC	4 cut(s)	1436, 1684, 1706, 1770
BmtI	GCTAGC	1 cut(s)	2088
BmuI	ACTGGG	2 cut(s)	1841, 1940
BpmI	CTGGAG	3 cut(s)	315, 323, 1908
Bpu10I	CCTNAGC	1 cut(s)	2166
BpuEI	CTTGAG	1 cut(s)	522
Bsa29I	ATCGAT	1 cut(s)	1277
BsaHI	GRCGYC	1 cut(s)	161
BsaI	GGTCTC	2 cut(s)	183, 1337
BsaJI	CCNNGG	4 cut(s)	108, 927, 928, 2006
BsaWI	WCCGGW	1 cut(s)	116
Bsc4I	CCNNNNNNNGG	4 cut(s)	73, 247, 933, 1588
Bse1I	ACTGG	6 cut(s)	1847, 1854, 1925, 1946, 2038, 2148
Bse3DI	GCAATG	2 cut(s)	324, 2051
BseBI	CCWGG	3 cut(s)	294, 387, 929
BseCI	ATCGAT	1 cut(s)	1277
BseDI	CCNNGG	4 cut(s)	108, 927, 928, 2006
BseGI	GGATG	5 cut(s)	446, 942, 1522, 1564, 1802
BseLI	CCNNNNNNNGG	4 cut(s)	73, 247, 933, 1588
BseMI	GCAATG	2 cut(s)	324, 2051
BseMII	CTCAG	6 cut(s)	420, 581, 1161, 1377, 1578, 2157
BseNI	ACTGG	6 cut(s)	1847, 1854, 1925, 1946, 2038, 2148
BseRI	GAGGAG	1 cut(s)	1802
BseSI	GKGCMC	1 cut(s)	1717
BseX3I	CGGCCG	1 cut(s)	105
BseXI	GCAGC	1 cut(s)	1387
Bsh1236I	CGCG	1 cut(s)	58
Bsh1285I	CGRYCG	1 cut(s)	108
BshFI	GGCC	5 cut(s)	107, 258, 1107, 1189, 1581
BshNI	GGYRCC	3 cut(s)	571, 669, 2221
BshVI	ATCGAT	1 cut(s)	1277
BsiEI	CGRYCG	1 cut(s)	108
BsiHKAI	GWGCWC	1 cut(s)	1717
BsiHKCI	CYCGRG	1 cut(s)	1155
BsiSI	CCGG	3 cut(s)	101, 117, 153
BslFI	GGGAC	1 cut(s)	660
BslI	CCNNNNNNNGG	4 cut(s)	73, 247, 933, 1588
BsmAI	GTCTC	7 cut(s)	183, 525, 1017, 1054, 1156, 1312, 1337
BsmFI	GGGAC	1 cut(s)	660
BsnI	GGCC	5 cut(s)	107, 258, 1107, 1189, 1581
Bso31I	GGTCTC	2 cut(s)	183, 1337
BsoBI	CYCGRG	1 cut(s)	1155
Bsp1286I	GDGCHC	2 cut(s)	1717, 2172
Bsp68I	TCGCGA	1 cut(s)	58
BspACI	CCGC	7 cut(s)	43, 87, 104, 150, 1227, 2026, 2082
BspANI	GGCC	5 cut(s)	107, 258, 1107, 1189, 1581
BspCNI	CTCAG	6 cut(s)	421, 580, 1162, 1378, 1579, 2158
BspDI	ATCGAT	1 cut(s)	1277
BspFNI	CGCG	1 cut(s)	58
BspHI	TCATGA	1 cut(s)	1651
BspLI	GGNNCC	8 cut(s)	501, 573, 648, 671, 1369, 1914, 1935, 2223
BspMI	ACCTGC	3 cut(s)	749, 1432, 2209
BspOI	GCTAGC	1 cut(s)	2088
BspPI	GGATC	6 cut(s)	92, 140, 494, 507, 1457, 1514
BspQI	GCTCTTC	2 cut(s)	776, 1024
BspT107I	GGYRCC	3 cut(s)	571, 669, 2221
BspTNI	GGTCTC	2 cut(s)	183, 1337
BsrBI	CCGCTC	1 cut(s)	45
BsrDI	GCAATG	2 cut(s)	324, 2051
BsrI	ACTGG	6 cut(s)	1847, 1854, 1925, 1946, 2038, 2148
BssECI	CCNNGG	4 cut(s)	108, 927, 928, 2006
BssNI	GRCGYC	1 cut(s)	161
BssSI	CACGAG	1 cut(s)	71
BssT1I	CCWWGG	1 cut(s)	2006
Bst2BI	CACGAG	1 cut(s)	71
Bst2UI	CCWGG	3 cut(s)	294, 387, 929
Bst4CI	ACNGT	5 cut(s)	170, 322, 606, 972, 1048
Bst6I	CTCTTC	3 cut(s)	776, 1024, 1335
BstACI	GRCGYC	1 cut(s)	161
BstAPI	GCANNNNNTGC	1 cut(s)	792
BstC8I	GCNNGC	5 cut(s)	150, 202, 1473, 1530, 2086
BstDEI	CTNAG	8 cut(s)	429, 567, 754, 1170, 1386, 1587, 2066, 2166
BstF5I	GGATG	5 cut(s)	446, 942, 1522, 1564, 1802
BstFNI	CGCG	1 cut(s)	58
BstMAI	GTCTC	7 cut(s)	183, 525, 1017, 1054, 1156, 1312, 1337
BstMCI	CGRYCG	1 cut(s)	108
BstMWI	GCNNNNNNNGC	6 cut(s)	101, 158, 335, 401, 792, 1850
BstNI	CCWGG	3 cut(s)	294, 387, 929
BstNSI	RCATGY	2 cut(s)	1475, 1532
BstSCI	CCNGG	3 cut(s)	292, 385, 927
BstSFI	CTRYAG	2 cut(s)	1131, 1326
BstSLI	GKGCMC	1 cut(s)	1717
BstUI	CGCG	1 cut(s)	58
BstV1I	GCAGC	1 cut(s)	1387
BstX2I	RGATCY	4 cut(s)	97, 132, 499, 2095
BstYI	RGATCY	4 cut(s)	97, 132, 499, 2095
BstZI	CGGCCG	1 cut(s)	105
Bsu15I	ATCGAT	1 cut(s)	1277
BsuI	GTATCC	1 cut(s)	1123
BsuRI	GGCC	5 cut(s)	107, 258, 1107, 1189, 1581
BsuTUI	ATCGAT	1 cut(s)	1277
BtgZI	GCGATG	1 cut(s)	39
BtsCI	GGATG	5 cut(s)	446, 942, 1522, 1564, 1802
BtsI	GCAGTG	1 cut(s)	867
BtsIMutI	CAGTG	5 cut(s)	175, 318, 867, 1717, 2217
BtuMI	TCGCGA	1 cut(s)	58
BveI	ACCTGC	3 cut(s)	749, 1432, 2209
Cac8I	GCNNGC	5 cut(s)	150, 202, 1473, 1530, 2086
CciI	TCATGA	1 cut(s)	1651
Cfr13I	GGNCC	6 cut(s)	64, 478, 647, 1105, 1187, 1580
ClaI	ATCGAT	1 cut(s)	1277
CseI	GACGC	1 cut(s)	150
CsiI	ACCWGGT	1 cut(s)	385
Csp6I	GTAC	4 cut(s)	621, 1821, 2031, 2222
CspCI	CAANNNNNGTGG	2 cut(s)	307, 342
CviQI	GTAC	4 cut(s)	621, 1821, 2031, 2222
DdeI	CTNAG	8 cut(s)	429, 567, 754, 1170, 1386, 1587, 2066, 2166
EaeI	YGGCCR	1 cut(s)	105
EagI	CGGCCG	1 cut(s)	105
Eam1104I	CTCTTC	3 cut(s)	776, 1024, 1335
EarI	CTCTTC	3 cut(s)	776, 1024, 1335
EclXI	CGGCCG	1 cut(s)	105
Eco130I	CCWWGG	1 cut(s)	2006
Eco24I	GRGCYC	1 cut(s)	2172
Eco31I	GGTCTC	2 cut(s)	183, 1337
Eco47I	GGWCC	3 cut(s)	64, 478, 647
Eco52I	CGGCCG	1 cut(s)	105
Eco57I	CTGAAG	3 cut(s)	169, 1383, 1554
Eco88I	CYCGRG	1 cut(s)	1155
EcoRII	CCWGG	3 cut(s)	292, 385, 927
EcoT14I	CCWWGG	1 cut(s)	2006
EcoT22I	ATGCAT	2 cut(s)	1630, 1699
EcoT38I	GRGCYC	1 cut(s)	2172
ErhI	CCWWGG	1 cut(s)	2006
FalI	AAGNNNNNCTT	6 cut(s)	344, 376, 728, 760, 2049, 2081
FaqI	GGGAC	1 cut(s)	660
FauI	CCCGC	1 cut(s)	157
FauNDI	CATATG	1 cut(s)	463
FbaI	TGATCA	1 cut(s)	843
Fnu4HI	GCNGC	4 cut(s)	43, 88, 105, 1376
FokI	GGATG	5 cut(s)	453, 949, 1529, 1571, 1789
FriOI	GRGCYC	1 cut(s)	2172
Fsp4HI	GCNGC	4 cut(s)	43, 88, 105, 1376
FspBI	CTAG	4 cut(s)	339, 357, 1602, 2085
GluI	GCNGC	4 cut(s)	43, 88, 105, 1376
GsuI	CTGGAG	3 cut(s)	315, 323, 1908
HaeIII	GGCC	5 cut(s)	107, 258, 1107, 1189, 1581
HapII	CCGG	3 cut(s)	101, 117, 153
HgaI	GACGC	1 cut(s)	150
Hin1I	GRCGYC	1 cut(s)	161
HincII	GTYRAC	2 cut(s)	1900, 1999
HindII	GTYRAC	2 cut(s)	1900, 1999
HindIII	AAGCTT	1 cut(s)	1003
HinfI	GANTC	9 cut(s)	69, 212, 923, 986, 1390, 1411, 1835, 1921, 2179
HpaII	CCGG	3 cut(s)	101, 117, 153
HphI	GGTGA	4 cut(s)	16, 151, 1586, 1692
Hpy166II	GTNNAC	5 cut(s)	142, 632, 1715, 1900, 1999
Hpy8I	GTNNAC	5 cut(s)	142, 632, 1715, 1900, 1999
Hpy99I	CGWCG	1 cut(s)	166
HpyCH4III	ACNGT	5 cut(s)	170, 322, 606, 972, 1048
HpyCH4IV	ACGT	1 cut(s)	2015
HpyF10VI	GCNNNNNNNGC	6 cut(s)	101, 158, 335, 401, 792, 1850
HpyF3I	CTNAG	8 cut(s)	429, 567, 754, 1170, 1386, 1587, 2066, 2166
HpySE526I	ACGT	1 cut(s)	2015
Hsp92I	GRCGYC	1 cut(s)	161
KpnI	GGTACC	1 cut(s)	2225
Ksp22I	TGATCA	1 cut(s)	843
LguI	GCTCTTC	2 cut(s)	776, 1024
LmnI	GCTCC	3 cut(s)	50, 335, 1501
Lsp1109I	GCAGC	1 cut(s)	1387
LweI	GCATC	4 cut(s)	1436, 1684, 1706, 1770
MabI	ACCWGGT	1 cut(s)	385
MaeI	CTAG	4 cut(s)	339, 357, 1602, 2085
MaeII	ACGT	1 cut(s)	2015
MaeIII	GTNAC	3 cut(s)	172, 1042, 1604
MbiI	CCGCTC	1 cut(s)	45
MfeI	CAATTG	2 cut(s)	229, 1545
MflI	RGATCY	4 cut(s)	97, 132, 499, 2095
MhlI	GDGCHC	2 cut(s)	1717, 2172
MlyI	GAGTC	5 cut(s)	63, 221, 917, 1915, 2188
MmeI	TCCRAC	5 cut(s)	33, 72, 91, 144, 570
Mph1103I	ATGCAT	2 cut(s)	1630, 1699
MroXI	GAANNNNTTC	1 cut(s)	1647
MslI	CAYNNNNRTG	2 cut(s)	486, 1778
MspA1I	CMGCKG	1 cut(s)	653
MspI	CCGG	3 cut(s)	101, 117, 153
MspR9I	CCNGG	3 cut(s)	294, 387, 929
MunI	CAATTG	2 cut(s)	229, 1545
MvaI	CCWGG	3 cut(s)	294, 387, 929
MvnI	CGCG	1 cut(s)	58
MwoI	GCNNNNNNNGC	6 cut(s)	101, 158, 335, 401, 792, 1850
NdeI	CATATG	1 cut(s)	463
NheI	GCTAGC	1 cut(s)	2084
NlaIV	GGNNCC	8 cut(s)	501, 573, 648, 671, 1369, 1914, 1935, 2223
NmeAIII	GCCGAG	1 cut(s)	133
NmuCI	GTSAC	3 cut(s)	172, 1042, 1604
NruI	TCGCGA	1 cut(s)	58
NsiI	ATGCAT	2 cut(s)	1630, 1699
NspI	RCATGY	2 cut(s)	1475, 1532
PaeI	GCATGC	2 cut(s)	1475, 1532
PagI	TCATGA	1 cut(s)	1651
PasI	CCCWGGG	1 cut(s)	928
PciSI	GCTCTTC	2 cut(s)	776, 1024
PdmI	GAANNNNTTC	1 cut(s)	1647
PfeI	GAWTC	4 cut(s)	986, 1390, 1411, 1835
PflFI	GACNNNGTC	1 cut(s)	170
PfoI	TCCNGGA	1 cut(s)	292
PkrI	GCNGC	4 cut(s)	44, 89, 106, 1377
PleI	GAGTC	5 cut(s)	63, 220, 917, 1915, 2187
PpsI	GAGTC	5 cut(s)	63, 220, 917, 1915, 2187
Psp1406I	AACGTT	1 cut(s)	2015
Psp6I	CCWGG	3 cut(s)	292, 385, 927
PspGI	CCWGG	3 cut(s)	292, 385, 927
PspN4I	GGNNCC	8 cut(s)	501, 573, 648, 671, 1369, 1914, 1935, 2223
PspPI	GGNCC	6 cut(s)	64, 478, 647, 1105, 1187, 1580
PsuI	RGATCY	4 cut(s)	97, 132, 499, 2095
PsyI	GACNNNGTC	1 cut(s)	170
PvuII	CAGCTG	1 cut(s)	653
RruI	TCGCGA	1 cut(s)	58
RsaI	GTAC	4 cut(s)	622, 1822, 2032, 2223
RsaNI	GTAC	4 cut(s)	621, 1821, 2031, 2222
RseI	CAYNNNNRTG	2 cut(s)	486, 1778
SapI	GCTCTTC	2 cut(s)	776, 1024
SatI	GCNGC	4 cut(s)	43, 88, 105, 1376
Sau96I	GGNCC	6 cut(s)	64, 478, 647, 1105, 1187, 1580
ScaI	AGTACT	1 cut(s)	2032
SchI	GAGTC	5 cut(s)	63, 221, 917, 1915, 2188
ScrFI	CCNGG	3 cut(s)	294, 387, 929
SduI	GDGCHC	2 cut(s)	1717, 2172
SexAI	ACCWGGT	1 cut(s)	385
SfaNI	GCATC	4 cut(s)	1436, 1684, 1706, 1770
SfcI	CTRYAG	2 cut(s)	1131, 1326
SinI	GGWCC	3 cut(s)	64, 478, 647
SmiMI	CAYNNNNRTG	2 cut(s)	486, 1778
SmlI	CTYRAG	1 cut(s)	537
SmoI	CTYRAG	1 cut(s)	537
SphI	GCATGC	2 cut(s)	1475, 1532
SsiI	CCGC	7 cut(s)	43, 87, 104, 150, 1227, 2026, 2082
SspMI	CTAG	4 cut(s)	339, 357, 1602, 2085
StyD4I	CCNGG	3 cut(s)	292, 385, 927
StyI	CCWWGG	1 cut(s)	2006
TaaI	ACNGT	5 cut(s)	170, 322, 606, 972, 1048
TaiI	ACGT	1 cut(s)	2018
TaqI	TCGA	2 cut(s)	374, 1277
TatI	WGTACW	2 cut(s)	1820, 2030
TauI	GCSGC	3 cut(s)	45, 90, 107
TfiI	GAWTC	4 cut(s)	986, 1390, 1411, 1835
TscAI	CASTG	5 cut(s)	175, 325, 867, 1717, 2217
TseFI	GTSAC	3 cut(s)	172, 1042, 1604
TseI	GCWGC	1 cut(s)	1375
Tsp45I	GTSAC	3 cut(s)	172, 1042, 1604
TspGWI	ACGGA	1 cut(s)	453
TspRI	CASTG	5 cut(s)	175, 325, 867, 1717, 2217
Tth111I	GACNNNGTC	1 cut(s)	170
VneI	GTGCAC	1 cut(s)	1713
VpaK11BI	GGWCC	3 cut(s)	64, 478, 647
XapI	RAATTY	2 cut(s)	593, 712
XceI	RCATGY	2 cut(s)	1475, 1532
XmnI	GAANNNNTTC	1 cut(s)	1647
XspI	CTAG	4 cut(s)	339, 357, 1602, 2085
ZrmI	AGTACT	1 cut(s)	2032
Zsp2I	ATGCAT	2 cut(s)	1630, 1699

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.