No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G30090 |
| fragaria_vesca | FvH4_4g07490 FvH4_4g07490 FvH4_4g07490 |
| malus_domestica | MD16G1251700.v1.1 |
| prunus_persica | Prupe.1G078300_v2.0.a1 Prupe.1G078300_v2.0.a1 Prupe.1G078300_v2.0.a1 Prupe.1G078300_v2.0.a1 Prupe.1G078300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0399971 |
| rosa_laevigata | RLG00000009223 |
| rosa_roxburghii | Rroxscaffold_5G00344870 Rroxscaffold_5G00344890 |
| rosa_rugosa | Rorug04G0021900 |
| rosa_samantha | Rh4AG097500 Rh4BG095400 Rh4BG095500 Rh4CG106700 Rh4DG092400 |
| rosa_wichuraiana | Rw4G008080 Rw4G008090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 267 |
| AcsI | RAATTY | 1 cut(s) | 164 |
| AcuI | CTGAAG | 1 cut(s) | 310 |
| AfaI | GTAC | 1 cut(s) | 147 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 64, 196 |
| AluBI | AGCT | 3 cut(s) | 26, 53, 107 |
| AluI | AGCT | 3 cut(s) | 26, 53, 107 |
| AoxI | GGCC | 2 cut(s) | 267, 282 |
| ApeKI | GCWGC | 1 cut(s) | 127 |
| ApoI | RAATTY | 1 cut(s) | 164 |
| AspS9I | GGNCC | 2 cut(s) | 199, 283 |
| AsuHPI | GGTGA | 3 cut(s) | 47, 79, 100 |
| AvaII | GGWCC | 1 cut(s) | 199 |
| BalI | TGGCCA | 1 cut(s) | 269 |
| BbvI | GCAGC | 1 cut(s) | 139 |
| BccI | CCATC | 2 cut(s) | 58, 198 |
| BfmI | CTRYAG | 1 cut(s) | 291 |
| BisI | GCNGC | 1 cut(s) | 128 |
| BlsI | GCNGC | 1 cut(s) | 129 |
| BmcAI | AGTACT | 1 cut(s) | 147 |
| Bme18I | GGWCC | 1 cut(s) | 199 |
| BmgT120I | GGNCC | 2 cut(s) | 199, 283 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 64, 196 |
| Bse1I | ACTGG | 2 cut(s) | 258, 285 |
| Bse3DI | GCAATG | 1 cut(s) | 117 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 64, 196 |
| BseMI | GCAATG | 1 cut(s) | 117 |
| BseNI | ACTGG | 2 cut(s) | 258, 285 |
| BseXI | GCAGC | 1 cut(s) | 139 |
| BshFI | GGCC | 2 cut(s) | 269, 284 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 64, 196 |
| BsnI | GGCC | 2 cut(s) | 269, 284 |
| BspANI | GGCC | 2 cut(s) | 269, 284 |
| BspHI | TCATGA | 1 cut(s) | 193 |
| BspMAI | CTGCAG | 1 cut(s) | 295 |
| BsrDI | GCAATG | 1 cut(s) | 117 |
| BsrI | ACTGG | 2 cut(s) | 258, 285 |
| BstC8I | GCNNGC | 2 cut(s) | 157, 291 |
| BstDEI | CTNAG | 1 cut(s) | 27 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 281, 290 |
| BstNSI | RCATGY | 1 cut(s) | 159 |
| BstSFI | CTRYAG | 1 cut(s) | 291 |
| BstV1I | GCAGC | 1 cut(s) | 139 |
| BsuRI | GGCC | 2 cut(s) | 269, 284 |
| BtsI | GCAGTG | 1 cut(s) | 270 |
| BtsIMutI | CAGTG | 1 cut(s) | 270 |
| Cac8I | GCNNGC | 2 cut(s) | 157, 291 |
| CciI | TCATGA | 1 cut(s) | 193 |
| Cfr13I | GGNCC | 2 cut(s) | 199, 283 |
| Csp6I | GTAC | 1 cut(s) | 146 |
| CviAII | CATG | 3 cut(s) | 156, 194, 258 |
| CviJI | RGCY | 9 cut(s) | 26, 43, 53, 80, 107, 130, 262, 269, 284 |
| CviKI_1 | RGCY | 9 cut(s) | 26, 43, 53, 80, 107, 130, 262, 269, 284 |
| CviQI | GTAC | 1 cut(s) | 146 |
| DdeI | CTNAG | 1 cut(s) | 27 |
| EaeI | YGGCCR | 1 cut(s) | 267 |
| Eco47I | GGWCC | 1 cut(s) | 199 |
| Eco57I | CTGAAG | 1 cut(s) | 310 |
| FaeI | CATG | 3 cut(s) | 159, 197, 261 |
| FatI | CATG | 3 cut(s) | 155, 193, 257 |
| Fnu4HI | GCNGC | 1 cut(s) | 128 |
| Fsp4HI | GCNGC | 1 cut(s) | 128 |
| GluI | GCNGC | 1 cut(s) | 128 |
| HaeIII | GGCC | 2 cut(s) | 269, 284 |
| Hin1II | CATG | 3 cut(s) | 159, 197, 261 |
| HincII | GTYRAC | 2 cut(s) | 228, 312 |
| HindII | GTYRAC | 2 cut(s) | 228, 312 |
| HphI | GGTGA | 3 cut(s) | 47, 79, 100 |
| Hpy166II | GTNNAC | 3 cut(s) | 36, 228, 312 |
| Hpy188III | TCNNGA | 1 cut(s) | 194 |
| Hpy8I | GTNNAC | 3 cut(s) | 36, 228, 312 |
| HpyCH4IV | ACGT | 1 cut(s) | 224 |
| HpyCH4V | TGCA | 5 cut(s) | 127, 159, 179, 242, 293 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 281, 290 |
| HpyF3I | CTNAG | 1 cut(s) | 27 |
| HpySE526I | ACGT | 1 cut(s) | 224 |
| Hsp92II | CATG | 3 cut(s) | 159, 197, 261 |
| LpnPI | CCDG | 7 cut(s) | 5, 239, 251, 266, 299, 303, 313 |
| Lsp1109I | GCAGC | 1 cut(s) | 139 |
| MaeII | ACGT | 1 cut(s) | 224 |
| MaeIII | GTNAC | 1 cut(s) | 88 |
| MboII | GAAGA | 1 cut(s) | 316 |
| MlsI | TGGCCA | 1 cut(s) | 269 |
| MluCI | AATT | 1 cut(s) | 164 |
| MluNI | TGGCCA | 1 cut(s) | 269 |
| MnlI | CCTC | 3 cut(s) | 21, 70, 190 |
| Mox20I | TGGCCA | 1 cut(s) | 269 |
| MscI | TGGCCA | 1 cut(s) | 269 |
| MseI | TTAA | 1 cut(s) | 306 |
| Msp20I | TGGCCA | 1 cut(s) | 269 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 281, 290 |
| NlaIII | CATG | 3 cut(s) | 159, 197, 261 |
| NmuCI | GTSAC | 1 cut(s) | 88 |
| NspI | RCATGY | 1 cut(s) | 159 |
| PaeI | GCATGC | 1 cut(s) | 159 |
| PagI | TCATGA | 1 cut(s) | 193 |
| PkrI | GCNGC | 1 cut(s) | 129 |
| PspPI | GGNCC | 2 cut(s) | 199, 283 |
| PstI | CTGCAG | 1 cut(s) | 295 |
| RsaI | GTAC | 1 cut(s) | 147 |
| RsaNI | GTAC | 1 cut(s) | 146 |
| SaqAI | TTAA | 1 cut(s) | 306 |
| SatI | GCNGC | 1 cut(s) | 128 |
| Sau96I | GGNCC | 2 cut(s) | 199, 283 |
| ScaI | AGTACT | 1 cut(s) | 147 |
| SetI | ASST | 8 cut(s) | 24, 28, 55, 60, 109, 201, 227, 332 |
| SfcI | CTRYAG | 1 cut(s) | 291 |
| SinI | GGWCC | 1 cut(s) | 199 |
| SphI | GCATGC | 1 cut(s) | 159 |
| Sse9I | AATT | 1 cut(s) | 164 |
| TaiI | ACGT | 1 cut(s) | 227 |
| TaqI | TCGA | 1 cut(s) | 249 |
| TasI | AATT | 1 cut(s) | 164 |
| TatI | WGTACW | 1 cut(s) | 145 |
| Tru1I | TTAA | 1 cut(s) | 306 |
| Tru9I | TTAA | 1 cut(s) | 306 |
| TscAI | CASTG | 1 cut(s) | 277 |
| TseFI | GTSAC | 1 cut(s) | 88 |
| TseI | GCWGC | 1 cut(s) | 127 |
| Tsp45I | GTSAC | 1 cut(s) | 88 |
| TspDTI | ATGAA | 1 cut(s) | 157 |
| TspGWI | ACGGA | 1 cut(s) | 307 |
| TspRI | CASTG | 1 cut(s) | 277 |
| VpaK11BI | GGWCC | 1 cut(s) | 199 |
| XapI | RAATTY | 1 cut(s) | 164 |
| XceI | RCATGY | 1 cut(s) | 159 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 277 |
| ZrmI | AGTACT | 1 cut(s) | 147 |