Rroxscaffold_5G00350900

Belongs to the ClpA ClpB family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0008218
Physical Location & Seq
Forward (+)
25642140 .. 25643731
1592 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00350900.1

Sequence Viewer

Length: 1356 bp
ATGTTTCATAATTATGTGTATTTCAGCGATCGCTTTCTTCCTGATAAAGCAATTGACTTGCTCGATGAAGCTGGTTCTACAGTACGGCTCCGTCATGCACAGCTTCCTGAAGAAGCTCAAGAGCTTGACAATATTCTGAGGCAGATAACAAAAGAGAAGAATGAAGCTAGTCGTAGCCAAGATTTTGAGAAGGCTGGGAAATTACGCGACAGAGAATTGGACCTTAAGACACAGATCTCAGCAGTAACAGAGAAAGGCAAGGAGATAAGTGAGGCATTGGATTATGTTAATGGTGGCCCTATTGTTACTGAATTGGATATTCAACATATTTTGTCTTGTTGGACTGGTATTCCAGTTGAGAAAGTGTCAACAAATGAATCTGATCGCCTCCTCAAGATGGAAGAGACGCTCCATAAGCGGGTTATTGGCCAGGATGAAGCAGTCAGGGCTATTAGCAGGGCTATTCGTCGAGCTCGTGTTGGACTGAAGAGTCCTAATCGGCCAATTGCCAGTTTCATCTTTTCTGGTCCAACTGGTGTTGGAAAATCTGAGCTCGCAAAAACTTTGGCGACTTGCTATTTTGGTTCTGAAGAATCAATGGTGAGGCTTGATATGAGTGAGTTCATGGAAAGGCACACTGTTTCCAAGCTCATTGGTTCTCCCCCTGGTTATGTTGGTTACACAGAGGGTGGTCAGCTGGTTGAAGCCGTTCGTCGCTGTCCTTACACTCTGGTGCTTTTTGATGAGATTGAGAAGGCTCATCCTGATGTTTTCAACTTGATGCTTCAAATACTTGAGGATGGAAGATTGACTGACAGCAAGGGTAGAACTGTAGATTTCAAGAATACACTGATCATTATGACGTCCAATGTTGGAAGCAGTGTCATTGAGAAAGGAGGCCGTAACATGGGATTTGACCCGGCCAAGGATGAAGACAAGGATAGCAGTTACAAACAAATTAAGGGCTTGGTGACGGAGGAATTGAAACACTACTTTCGACCAGAGTTCTTAAATAGGTTGGATGAAATGATAGTTTTTCGGCAGCTGAGTAAGTTGGAGGTAAAGGAAATTGCAGACATAATGCTGAACGAGGTTTATGGAAGGCTCACGTCCAAAGAGATAGAGCTTCGTGTGACAGAGAGGTTCAAAGACAAAGTGGTTGACGAAGGATACGACCCAAGCTATGGAGCAAGGCCTTTAAGAAGAGCCATAATGAGACTTTTGGAGGACAGCATGGCTGAGAAGATGCTGGCAAGGGAGATCAAAGAGGGTGATTCAGTTATTGTGGATGTTGATTCTGATGGGAATGTGATTGTGCTCATCAATAGCAGCGCTAAGACAGTGACAAAGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004176 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006605 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0008104 GO:0008150 GO:0008152 GO:0008233 GO:0009507 GO:0009526 GO:0009528 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009657 GO:0009658 GO:0009706 GO:0009719 GO:0009725 GO:0009735 GO:0009889 GO:0009941 GO:0009987 GO:0010033 GO:0010380 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017038 GO:0017111 GO:0019222 GO:0019538 GO:0019866 GO:0022607 GO:0030312 GO:0031090 GO:0031323 GO:0031326 GO:0031897 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032991 GO:0033036 GO:0033365 GO:0034214 GO:0034357 GO:0034613 GO:0042170 GO:0042221 GO:0042623 GO:0042651 GO:0042802 GO:0042803 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0046983 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051179 GO:0051193 GO:0051234 GO:0051259 GO:0051641 GO:0051649 GO:0055035 GO:0055085 GO:0065002 GO:0065003 GO:0065007 GO:0070011 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0071840 GO:0071944 GO:0072594 GO:0072596 GO:0072598 GO:0090056 GO:0098796 GO:0140096 GO:1901401 GO:1901463 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko01100 map01100
Pfam Domains
Protein Families
AAA AAA_2 ClpB_D2-small Clp_N UVR

Protein Analysis

451

Amino Acids

51.02

Weight (kDa)

5.57

Isoelectric Point (pI)

44.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_lid_9 PF17871 7 - 70 4e-16 AAA lid domain
UVR PF02151 44 - 78 1.5e-09 UvrB/uvrC motif
AAA_2 PF07724 167 - 342 5.5e-67 AAA domain (Cdc48 subfamily)
AAA_5 PF07728 172 - 293 1.6e-11 AAA domain (dynein-related subfamily)
ClpB_D2-small PF10431 349 - 429 1.3e-25 C-terminal, D2-small domain, of ClpB protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 489
AatII GACGTC 1 cut(s) 866
AccB7I CCANNNNNTGG 1 cut(s) 1184
AccII CGCG 1 cut(s) 207
AciI CCGC 1 cut(s) 418
AcoI YGGCCR 3 cut(s) 427, 500, 921
AcuI CTGAAG 3 cut(s) 129, 506, 609
AcyI GRCGYC 1 cut(s) 863
AfaI GTAC 1 cut(s) 84
AfeI AGCGCT 1 cut(s) 1333
AfiI CCNNNNNNNGG 5 cut(s) 397, 418, 907, 925, 1184
AflII CTTAAG 1 cut(s) 224
AgsI TTSAA 7 cut(s) 323, 704, 775, 788, 841, 985, 1147
AjiI CACGTC 1 cut(s) 1110
AjnI CCWGG 2 cut(s) 429, 664
AleI CACNNNNGTG 1 cut(s) 731
Alw21I GWGCWC 3 cut(s) 475, 555, 1320
Alw26I GTCTC 2 cut(s) 398, 1210
Aor51HI AGCGCT 1 cut(s) 1333
AoxI GGCC 6 cut(s) 295, 427, 500, 898, 921, 1193
ApeKI GCWGC 2 cut(s) 1042, 1329
AsiSI GCGATCGC 1 cut(s) 31
Asp700I GAANNNNTTC 1 cut(s) 708
AspLEI GCGC 1 cut(s) 1334
AspS9I GGNCC 3 cut(s) 220, 296, 527
AsuC2I CCSGG 1 cut(s) 920
AsuHPI GGTGA 3 cut(s) 613, 982, 1283
AvaII GGWCC 2 cut(s) 220, 527
BalI TGGCCA 1 cut(s) 429
BanII GRGCYC 2 cut(s) 475, 555
BauI CACGAG 1 cut(s) 474
BbsI GAAGAC 1 cut(s) 939
Bbv12I GWGCWC 3 cut(s) 475, 555, 1320
BbvI GCAGC 2 cut(s) 1054, 1341
BccI CCATC 3 cut(s) 391, 794, 1295
BceAI ACGGC 3 cut(s) 101, 692, 885
BciT130I CCWGG 2 cut(s) 431, 666
BciVI GTATCC 1 cut(s) 1163
BclI TGATCA 1 cut(s) 852
BcnI CCSGG 1 cut(s) 920
BcoDI GTCTC 2 cut(s) 398, 1210
BfaI CTAG 1 cut(s) 168
BfmI CTRYAG 2 cut(s) 78, 831
BfoI RGCGCY 1 cut(s) 1335
BfrI CTTAAG 1 cut(s) 224
BfuI GTATCC 1 cut(s) 1163
BglII AGATCT 1 cut(s) 234
BisI GCNGC 2 cut(s) 1043, 1330
BlsI GCNGC 2 cut(s) 1044, 1331
Bme1390I CCNGG 3 cut(s) 431, 666, 920
Bme18I GGWCC 2 cut(s) 220, 527
BmgBI CACGTC 1 cut(s) 1110
BmgT120I GGNCC 3 cut(s) 220, 296, 527
BmiI GGNNCC 1 cut(s) 89
BmrFI CCNGG 3 cut(s) 431, 666, 920
BmsI GCATC 2 cut(s) 771, 1236
BpiI GAAGAC 1 cut(s) 939
BpuEI CTTGAG 3 cut(s) 102, 377, 815
BpuMI CCSGG 1 cut(s) 920
BsaHI GRCGYC 1 cut(s) 863
BsaJI CCNNGG 2 cut(s) 664, 924
Bsc4I CCNNNNNNNGG 5 cut(s) 397, 418, 907, 925, 1184
Bse1I ACTGG 4 cut(s) 349, 353, 510, 538
BseBI CCWGG 2 cut(s) 431, 666
BseDI CCNNGG 2 cut(s) 664, 924
BseGI GGATG 6 cut(s) 439, 760, 805, 934, 1027, 1294
BseLI CCNNNNNNNGG 5 cut(s) 397, 418, 907, 925, 1184
BseMII CTCAG 5 cut(s) 128, 252, 540, 1037, 1230
BseNI ACTGG 4 cut(s) 349, 353, 510, 538
BseRI GAGGAG 1 cut(s) 380
BseXI GCAGC 2 cut(s) 1054, 1341
BseYI CCCAGC 1 cut(s) 194
Bsh1236I CGCG 1 cut(s) 207
Bsh1285I CGRYCG 1 cut(s) 31
BshFI GGCC 6 cut(s) 297, 429, 502, 900, 923, 1195
BsiEI CGRYCG 1 cut(s) 31
BsiHKAI GWGCWC 3 cut(s) 475, 555, 1320
BsiSI CCGG 1 cut(s) 920
BslI CCNNNNNNNGG 5 cut(s) 397, 418, 907, 925, 1184
BsmAI GTCTC 2 cut(s) 398, 1210
BsmBI CGTCTC 1 cut(s) 398
BsnI GGCC 6 cut(s) 297, 429, 502, 900, 923, 1195
Bsp1286I GDGCHC 3 cut(s) 475, 555, 1320
Bsp143I GATC 5 cut(s) 28, 234, 382, 852, 1260
BspACI CCGC 1 cut(s) 418
BspANI GGCC 6 cut(s) 297, 429, 502, 900, 923, 1195
BspCNI CTCAG 5 cut(s) 129, 251, 541, 1038, 1231
BspFNI CGCG 1 cut(s) 207
BspLI GGNNCC 1 cut(s) 89
BspQI GCTCTTC 1 cut(s) 1198
BspTI CTTAAG 1 cut(s) 224
BsrI ACTGG 4 cut(s) 349, 353, 510, 538
BssECI CCNNGG 2 cut(s) 664, 924
BssMI GATC 5 cut(s) 28, 234, 382, 852, 1260
BssNI GRCGYC 1 cut(s) 863
BssSI CACGAG 1 cut(s) 474
BssT1I CCWWGG 1 cut(s) 924
Bst2BI CACGAG 1 cut(s) 474
Bst2UI CCWGG 2 cut(s) 431, 666
Bst4CI ACNGT 4 cut(s) 82, 640, 832, 1342
Bst6I CTCTTC 3 cut(s) 396, 482, 1198
BstACI GRCGYC 1 cut(s) 863
BstAFI CTTAAG 1 cut(s) 224
BstC8I GCNNGC 2 cut(s) 555, 1251
BstDEI CTNAG 6 cut(s) 137, 238, 549, 1046, 1239, 1335
BstF5I GGATG 6 cut(s) 439, 760, 805, 934, 1027, 1294
BstFNI CGCG 1 cut(s) 207
BstH2I RGCGCY 1 cut(s) 1335
BstHHI GCGC 1 cut(s) 1334
BstKTI GATC 5 cut(s) 31, 237, 385, 855, 1263
BstMAI GTCTC 2 cut(s) 398, 1210
BstMBI GATC 5 cut(s) 28, 234, 382, 852, 1260
BstMCI CGRYCG 1 cut(s) 31
BstMWI GCNNNNNNNGC 2 cut(s) 415, 446
BstNI CCWGG 2 cut(s) 431, 666
BstSCI CCNGG 3 cut(s) 429, 664, 918
BstSFI CTRYAG 2 cut(s) 78, 831
BstUI CGCG 1 cut(s) 207
BstV1I GCAGC 2 cut(s) 1054, 1341
BstV2I GAAGAC 1 cut(s) 939
BstX2I RGATCY 1 cut(s) 234
BstYI RGATCY 1 cut(s) 234
BsuI GTATCC 1 cut(s) 1163
BsuRI GGCC 6 cut(s) 297, 429, 502, 900, 923, 1195
BtrI CACGTC 1 cut(s) 1110
BtsCI GGATG 6 cut(s) 439, 760, 805, 934, 1027, 1294
BtsI GCAGTG 1 cut(s) 886
BtsIMutI CAGTG 4 cut(s) 636, 848, 886, 1347
Cac8I GCNNGC 2 cut(s) 555, 1251
CfoI GCGC 1 cut(s) 1334
Cfr13I GGNCC 3 cut(s) 220, 296, 527
CseI GACGC 1 cut(s) 415
Csp6I GTAC 1 cut(s) 83
CviAII CATG 4 cut(s) 95, 625, 907, 1234
CviQI GTAC 1 cut(s) 83
DdeI CTNAG 6 cut(s) 137, 238, 549, 1046, 1239, 1335
DpnI GATC 5 cut(s) 30, 236, 384, 854, 1262
DpnII GATC 5 cut(s) 28, 234, 382, 852, 1260
DrdI GACNNNNNNGTC 1 cut(s) 489
DseDI GACNNNNNNGTC 1 cut(s) 489
EaeI YGGCCR 3 cut(s) 427, 500, 921
Eam1104I CTCTTC 3 cut(s) 396, 482, 1198
EarI CTCTTC 3 cut(s) 396, 482, 1198
Ecl136II GAGCTC 2 cut(s) 473, 553
Eco130I CCWWGG 1 cut(s) 924
Eco147I AGGCCT 1 cut(s) 1195
Eco24I GRGCYC 2 cut(s) 475, 555
Eco47I GGWCC 2 cut(s) 220, 527
Eco47III AGCGCT 1 cut(s) 1333
Eco53kI GAGCTC 2 cut(s) 473, 553
Eco57I CTGAAG 3 cut(s) 129, 506, 609
EcoICRI GAGCTC 2 cut(s) 473, 553
EcoRII CCWGG 2 cut(s) 429, 664
EcoT14I CCWWGG 1 cut(s) 924
EcoT38I GRGCYC 2 cut(s) 475, 555
ErhI CCWWGG 1 cut(s) 924
Esp3I CGTCTC 1 cut(s) 398
FaeI CATG 4 cut(s) 98, 628, 910, 1237
FatI CATG 4 cut(s) 94, 624, 906, 1233
FauI CCCGC 1 cut(s) 411
FbaI TGATCA 1 cut(s) 852
Fnu4HI GCNGC 2 cut(s) 1043, 1330
FokI GGATG 6 cut(s) 446, 747, 812, 941, 1034, 1301
FriOI GRGCYC 2 cut(s) 475, 555
Fsp4HI GCNGC 2 cut(s) 1043, 1330
FspBI CTAG 1 cut(s) 168
GlaI GCGC 1 cut(s) 1333
GluI GCNGC 2 cut(s) 1043, 1330
GsaI CCCAGC 1 cut(s) 198
HaeII RGCGCY 1 cut(s) 1335
HaeIII GGCC 6 cut(s) 297, 429, 502, 900, 923, 1195
HapII CCGG 1 cut(s) 920
HgaI GACGC 1 cut(s) 415
HhaI GCGC 1 cut(s) 1334
Hin1I GRCGYC 1 cut(s) 863
Hin1II CATG 4 cut(s) 98, 628, 910, 1237
Hin6I GCGC 1 cut(s) 1332
HinP1I GCGC 1 cut(s) 1332
HincII GTYRAC 2 cut(s) 369, 1162
HindII GTYRAC 2 cut(s) 369, 1162
HinfI GANTC 5 cut(s) 377, 490, 593, 1274, 1295
HpaII CCGG 1 cut(s) 920
HphI GGTGA 3 cut(s) 613, 982, 1283
Hpy166II GTNNAC 2 cut(s) 369, 1162
Hpy188I TCNGA 5 cut(s) 138, 382, 550, 589, 1300
Hpy188III TCNNGA 6 cut(s) 41, 107, 119, 394, 764, 841
Hpy8I GTNNAC 2 cut(s) 369, 1162
Hpy99I CGWCG 2 cut(s) 471, 717
HpyAV CCTTC 4 cut(s) 184, 748, 1095, 1160
HpyCH4III ACNGT 4 cut(s) 82, 640, 832, 1342
HpyCH4IV ACGT 2 cut(s) 863, 1109
HpyCH4V TGCA 2 cut(s) 98, 1073
HpyF10VI GCNNNNNNNGC 2 cut(s) 415, 446
HpyF3I CTNAG 6 cut(s) 137, 238, 549, 1046, 1239, 1335
HpySE526I ACGT 2 cut(s) 863, 1109
Hsp92I GRCGYC 1 cut(s) 863
Hsp92II CATG 4 cut(s) 98, 628, 910, 1237
HspAI GCGC 1 cut(s) 1332
Ksp22I TGATCA 1 cut(s) 852
Kzo9I GATC 5 cut(s) 28, 234, 382, 852, 1260
LguI GCTCTTC 1 cut(s) 1198
LmnI GCTCC 3 cut(s) 93, 414, 1187
Lsp1109I GCAGC 2 cut(s) 1054, 1341
LweI GCATC 2 cut(s) 771, 1236
MaeI CTAG 1 cut(s) 168
MaeII ACGT 2 cut(s) 863, 1109
MaeIII GTNAC 8 cut(s) 244, 304, 677, 902, 947, 970, 1132, 1342
MalI GATC 5 cut(s) 30, 236, 384, 854, 1262
MboI GATC 5 cut(s) 28, 234, 382, 852, 1260
MfeI CAATTG 2 cut(s) 51, 504
MflI RGATCY 1 cut(s) 234
MhlI GDGCHC 3 cut(s) 475, 555, 1320
MlsI TGGCCA 1 cut(s) 429
MluCI AATT 9 cut(s) 10, 51, 200, 215, 311, 504, 957, 980, 1068
MluNI TGGCCA 1 cut(s) 429
MlyI GAGTC 1 cut(s) 499
MmeI TCCRAC 7 cut(s) 320, 460, 520, 554, 853, 999, 1035
Mox20I TGGCCA 1 cut(s) 429
MroXI GAANNNNTTC 1 cut(s) 708
MscI TGGCCA 1 cut(s) 429
MseI TTAA 5 cut(s) 225, 288, 960, 1010, 1199
MslI CAYNNNNRTG 3 cut(s) 12, 731, 765
Msp20I TGGCCA 1 cut(s) 429
MspA1I CMGCKG 2 cut(s) 697, 1045
MspCI CTTAAG 1 cut(s) 224
MspI CCGG 1 cut(s) 920
MspR9I CCNGG 3 cut(s) 431, 666, 920
MunI CAATTG 2 cut(s) 51, 504
MvaI CCWGG 2 cut(s) 431, 666
MvnI CGCG 1 cut(s) 207
MwoI GCNNNNNNNGC 2 cut(s) 415, 446
NciI CCSGG 1 cut(s) 920
NdeII GATC 5 cut(s) 28, 234, 382, 852, 1260
NlaIII CATG 4 cut(s) 98, 628, 910, 1237
NlaIV GGNNCC 1 cut(s) 89
NmuCI GTSAC 3 cut(s) 970, 1132, 1342
OliI CACNNNNGTG 1 cut(s) 731
PceI AGGCCT 1 cut(s) 1195
PciSI GCTCTTC 1 cut(s) 1198
PcsI WCGNNNNNNNCGW 2 cut(s) 472, 1170
PdmI GAANNNNTTC 1 cut(s) 708
PfeI GAWTC 4 cut(s) 377, 593, 1274, 1295
PflMI CCANNNNNTGG 1 cut(s) 1184
PkrI GCNGC 2 cut(s) 1044, 1331
Ple19I CGATCG 1 cut(s) 31
PleI GAGTC 1 cut(s) 498
PpsI GAGTC 1 cut(s) 498
Psp124BI GAGCTC 2 cut(s) 475, 555
Psp6I CCWGG 2 cut(s) 429, 664
PspFI CCCAGC 1 cut(s) 194
PspGI CCWGG 2 cut(s) 429, 664
PspN4I GGNNCC 1 cut(s) 89
PspPI GGNCC 3 cut(s) 220, 296, 527
PsuI RGATCY 1 cut(s) 234
PvuI CGATCG 1 cut(s) 31
PvuII CAGCTG 2 cut(s) 697, 1045
RgaI GCGATCGC 1 cut(s) 31
RsaI GTAC 1 cut(s) 84
RsaNI GTAC 1 cut(s) 83
RseI CAYNNNNRTG 3 cut(s) 12, 731, 765
SacI GAGCTC 2 cut(s) 475, 555
SapI GCTCTTC 1 cut(s) 1198
SaqAI TTAA 5 cut(s) 225, 288, 960, 1010, 1199
SatI GCNGC 2 cut(s) 1043, 1330
Sau3AI GATC 5 cut(s) 28, 234, 382, 852, 1260
Sau96I GGNCC 3 cut(s) 220, 296, 527
SchI GAGTC 1 cut(s) 499
ScrFI CCNGG 3 cut(s) 431, 666, 920
SduI GDGCHC 3 cut(s) 475, 555, 1320
SfaAI GCGATCGC 1 cut(s) 31
SfaNI GCATC 2 cut(s) 771, 1236
SfcI CTRYAG 2 cut(s) 78, 831
SgfI GCGATCGC 1 cut(s) 31
SinI GGWCC 2 cut(s) 220, 527
SmiMI CAYNNNNRTG 3 cut(s) 12, 731, 765
SmlI CTYRAG 4 cut(s) 117, 224, 392, 794
SmoI CTYRAG 4 cut(s) 117, 224, 392, 794
Sse9I AATT 9 cut(s) 10, 51, 200, 215, 311, 504, 957, 980, 1068
SseBI AGGCCT 1 cut(s) 1195
SsiI CCGC 1 cut(s) 418
SspI AATATT 1 cut(s) 133
SspMI CTAG 1 cut(s) 168
SstI GAGCTC 2 cut(s) 475, 555
StuI AGGCCT 1 cut(s) 1195
StyD4I CCNGG 3 cut(s) 429, 664, 918
StyI CCWWGG 1 cut(s) 924
TaaI ACNGT 4 cut(s) 82, 640, 832, 1342
TaiI ACGT 2 cut(s) 866, 1112
TaqI TCGA 3 cut(s) 63, 469, 997
TasI AATT 9 cut(s) 10, 51, 200, 215, 311, 504, 957, 980, 1068
TfiI GAWTC 4 cut(s) 377, 593, 1274, 1295
Tru1I TTAA 5 cut(s) 225, 288, 960, 1010, 1199
Tru9I TTAA 5 cut(s) 225, 288, 960, 1010, 1199
TscAI CASTG 4 cut(s) 643, 855, 886, 1347
TseFI GTSAC 3 cut(s) 970, 1132, 1342
TseI GCWGC 2 cut(s) 1042, 1329
Tsp45I GTSAC 3 cut(s) 970, 1132, 1342
TspDTI ATGAA 8 cut(s) 81, 177, 390, 450, 505, 613, 945, 1038
TspGWI ACGGA 2 cut(s) 80, 989
TspRI CASTG 4 cut(s) 643, 855, 886, 1347
Van91I CCANNNNNTGG 1 cut(s) 1184
Vha464I CTTAAG 1 cut(s) 224
VpaK11BI GGWCC 2 cut(s) 220, 527
XmnI GAANNNNTTC 1 cut(s) 708
XspI CTAG 1 cut(s) 168
ZraI GACGTC 1 cut(s) 864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.