Belongs to the ClpA ClpB family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g30120 |
| rosa_chinensis | RchiOBHm_Chr4g0406181 |
| rosa_laevigata | RLG00000001903 RLG00000001904 RLG00000008791 |
| rosa_multiflora | Rmu_sc0007212.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00234770 Rroxscaffold_3G00234840 Rroxscaffold_3G00234850 Rroxscaffold_3G00269310 Rroxscaffold_4G00309870 Rroxscaffold_5G00350900 |
| rosa_rugosa | Rorug04G0066300.1 Rorug07G0222700 |
| rosa_samantha | Rh4AG136000 Rh4BG133500 Rh4CG144200 Rh4DG131000 Rh7AG380600 Rh7BG359300 Rh7CG400000 |
| rosa_wichuraiana | Rw0G015120 Rw4G011160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 12 |
| AcsI | RAATTY | 1 cut(s) | 166 |
| AcuI | CTGAAG | 2 cut(s) | 63, 96 |
| AfaI | GTAC | 1 cut(s) | 226 |
| AflIII | ACRYGT | 1 cut(s) | 90 |
| AjnI | CCWGG | 1 cut(s) | 19 |
| AluBI | AGCT | 1 cut(s) | 77 |
| AluI | AGCT | 1 cut(s) | 77 |
| AlwI | GGATC | 1 cut(s) | 12 |
| ApoI | RAATTY | 1 cut(s) | 166 |
| BccI | CCATC | 1 cut(s) | 150 |
| BciT130I | CCWGG | 1 cut(s) | 21 |
| BfaI | CTAG | 1 cut(s) | 228 |
| Bme1390I | CCNGG | 1 cut(s) | 21 |
| BmrFI | CCNGG | 1 cut(s) | 21 |
| BmsI | GCATC | 1 cut(s) | 44 |
| BpuEI | CTTGAG | 1 cut(s) | 138 |
| BsaJI | CCNNGG | 1 cut(s) | 19 |
| BseBI | CCWGG | 1 cut(s) | 21 |
| BseDI | CCNNGG | 1 cut(s) | 19 |
| BseGI | GGATG | 3 cut(s) | 12, 35, 142 |
| BslFI | GGGAC | 1 cut(s) | 150 |
| BsmFI | GGGAC | 1 cut(s) | 150 |
| Bsp143I | GATC | 1 cut(s) | 4 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BssECI | CCNNGG | 1 cut(s) | 19 |
| BssMI | GATC | 1 cut(s) | 4 |
| Bst2UI | CCWGG | 1 cut(s) | 21 |
| BstF5I | GGATG | 3 cut(s) | 12, 35, 142 |
| BstKTI | GATC | 1 cut(s) | 7 |
| BstMBI | GATC | 1 cut(s) | 4 |
| BstNI | CCWGG | 1 cut(s) | 21 |
| BstNSI | RCATGY | 1 cut(s) | 94 |
| BstSCI | CCNGG | 1 cut(s) | 19 |
| BstX2I | RGATCY | 1 cut(s) | 4 |
| BstYI | RGATCY | 1 cut(s) | 4 |
| BtsCI | GGATG | 3 cut(s) | 12, 35, 142 |
| Csp6I | GTAC | 1 cut(s) | 225 |
| CviAII | CATG | 1 cut(s) | 91 |
| CviJI | RGCY | 4 cut(s) | 77, 83, 106, 116 |
| CviKI_1 | RGCY | 4 cut(s) | 77, 83, 106, 116 |
| CviQI | GTAC | 1 cut(s) | 225 |
| DpnI | GATC | 1 cut(s) | 6 |
| DpnII | GATC | 1 cut(s) | 4 |
| Eco57I | CTGAAG | 2 cut(s) | 63, 96 |
| EcoRII | CCWGG | 1 cut(s) | 19 |
| FaeI | CATG | 1 cut(s) | 94 |
| FaiI | YATR | 6 cut(s) | 10, 26, 54, 92, 212, 218 |
| FaqI | GGGAC | 1 cut(s) | 150 |
| FatI | CATG | 1 cut(s) | 90 |
| FokI | GGATG | 2 cut(s) | 22, 129 |
| FspBI | CTAG | 1 cut(s) | 228 |
| Hin1II | CATG | 1 cut(s) | 94 |
| Hpy188III | TCNNGA | 1 cut(s) | 96 |
| HpyCH4V | TGCA | 1 cut(s) | 122 |
| Hsp92II | CATG | 1 cut(s) | 94 |
| Kzo9I | GATC | 1 cut(s) | 4 |
| LpnPI | CCDG | 2 cut(s) | 6, 33 |
| LweI | GCATC | 1 cut(s) | 44 |
| MaeI | CTAG | 1 cut(s) | 228 |
| MalI | GATC | 1 cut(s) | 6 |
| MboI | GATC | 1 cut(s) | 4 |
| MfeI | CAATTG | 1 cut(s) | 123 |
| MflI | RGATCY | 1 cut(s) | 4 |
| MluCI | AATT | 2 cut(s) | 123, 166 |
| MnlI | CCTC | 2 cut(s) | 26, 49 |
| MseI | TTAA | 1 cut(s) | 86 |
| MspR9I | CCNGG | 1 cut(s) | 21 |
| MunI | CAATTG | 1 cut(s) | 123 |
| MvaI | CCWGG | 1 cut(s) | 21 |
| NdeII | GATC | 1 cut(s) | 4 |
| NlaIII | CATG | 1 cut(s) | 94 |
| NspI | RCATGY | 1 cut(s) | 94 |
| PciI | ACATGT | 1 cut(s) | 90 |
| PscI | ACATGT | 1 cut(s) | 90 |
| Psp6I | CCWGG | 1 cut(s) | 19 |
| PspGI | CCWGG | 1 cut(s) | 19 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 217 |
| PsuI | RGATCY | 1 cut(s) | 4 |
| RsaI | GTAC | 1 cut(s) | 226 |
| RsaNI | GTAC | 1 cut(s) | 225 |
| SaqAI | TTAA | 1 cut(s) | 86 |
| Sau3AI | GATC | 1 cut(s) | 4 |
| ScrFI | CCNGG | 1 cut(s) | 21 |
| SetI | ASST | 1 cut(s) | 79 |
| SfaNI | GCATC | 1 cut(s) | 44 |
| SgeI | CNNG | 9 cut(s) | 32, 33, 103, 108, 147, 167, 198, 211, 240 |
| SmlI | CTYRAG | 1 cut(s) | 153 |
| SmoI | CTYRAG | 1 cut(s) | 153 |
| Sse9I | AATT | 2 cut(s) | 123, 166 |
| SspMI | CTAG | 1 cut(s) | 228 |
| StyD4I | CCNGG | 1 cut(s) | 19 |
| TasI | AATT | 2 cut(s) | 123, 166 |
| TatI | WGTACW | 1 cut(s) | 224 |
| Tru1I | TTAA | 1 cut(s) | 86 |
| Tru9I | TTAA | 1 cut(s) | 86 |
| XapI | RAATTY | 1 cut(s) | 166 |
| XceI | RCATGY | 1 cut(s) | 94 |
| XspI | CTAG | 1 cut(s) | 228 |