Cop9 signalosome complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G26990 |
| fragaria_vesca | FvH4_4g27570 |
| malus_domestica | MD00G1108200.v1.1 MD03G1163800.v1.1 MD11G1176300.v1.1 |
| prunus_persica | Prupe.6G156800_v2.0.a1 Prupe.6G156800_v2.0.a1 |
| pyrus_communis | pycom11g15960 pycom11g16000 |
| rosa_chinensis | RchiOBHm_Chr4g0435421 RchiOBHm_Chr5g0050051 |
| rosa_laevigata | RLG00000006594 RLG00000034682 |
| rosa_multiflora | Rmu_sc0000333.1_g000008 Rmu_sc0001940.1_g000023 Rmu_sc0009623.1_g000002 Rmu_sc0016267.1_g000001 Rmu_sc0036582.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00031080 Rroxscaffold_5G00376660 |
| rosa_rugosa | Rorug04G0284900 Rorug05G0256900 |
| rosa_samantha | Rh4AG340600 Rh4BG348900 Rh4CG363400 Rh4DG343100 Rh5AG330100 Rh5BG340800 Rh5CG367400 Rh5DG353500 |
| rosa_wichuraiana | Rw4G029700 Rw5G031150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 839, 1204 |
| AccBSI | CCGCTC | 1 cut(s) | 700 |
| AccI | GTMKAC | 1 cut(s) | 775 |
| AccII | CGCG | 1 cut(s) | 1212 |
| AciI | CCGC | 4 cut(s) | 700, 717, 758, 1212 |
| AclWI | GGATC | 4 cut(s) | 113, 659, 863, 992 |
| AcsI | RAATTY | 3 cut(s) | 459, 940, 1089 |
| AcuI | CTGAAG | 2 cut(s) | 966, 1292 |
| AfaI | GTAC | 4 cut(s) | 41, 541, 963, 1076 |
| AfeI | AGCGCT | 1 cut(s) | 132 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 409, 839, 1204 |
| AflII | CTTAAG | 1 cut(s) | 446 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1101, 1133 |
| AluBI | AGCT | 7 cut(s) | 287, 350, 451, 617, 737, 1141, 1201 |
| AluI | AGCT | 7 cut(s) | 287, 350, 451, 617, 737, 1141, 1201 |
| Alw26I | GTCTC | 4 cut(s) | 107, 230, 371, 1281 |
| AlwI | GGATC | 4 cut(s) | 113, 659, 863, 992 |
| Aor51HI | AGCGCT | 1 cut(s) | 132 |
| AoxI | GGCC | 2 cut(s) | 399, 714 |
| ApeKI | GCWGC | 5 cut(s) | 902, 1054, 1138, 1244, 1301 |
| ApoI | RAATTY | 3 cut(s) | 459, 940, 1089 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 153 |
| AspA2I | CCTAGG | 1 cut(s) | 647 |
| AspLEI | GCGC | 2 cut(s) | 133, 1212 |
| AspS9I | GGNCC | 1 cut(s) | 400 |
| AsuC2I | CCSGG | 1 cut(s) | 343 |
| AsuHPI | GGTGA | 2 cut(s) | 1204, 1226 |
| AsuII | TTCGAA | 1 cut(s) | 1009 |
| AvrII | CCTAGG | 1 cut(s) | 647 |
| AxyI | CCTNAGG | 1 cut(s) | 57 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 203, 235 |
| BbsI | GAAGAC | 1 cut(s) | 989 |
| BbvI | GCAGC | 5 cut(s) | 914, 1041, 1150, 1231, 1288 |
| BccI | CCATC | 4 cut(s) | 241, 530, 833, 1169 |
| BceAI | ACGGC | 3 cut(s) | 841, 1057, 1232 |
| BclI | TGATCA | 2 cut(s) | 547, 1186 |
| BcnI | CCSGG | 1 cut(s) | 343 |
| BcoDI | GTCTC | 4 cut(s) | 107, 230, 371, 1281 |
| BfaI | CTAG | 2 cut(s) | 351, 648 |
| BfmI | CTRYAG | 1 cut(s) | 720 |
| BfoI | RGCGCY | 1 cut(s) | 134 |
| BfrI | CTTAAG | 1 cut(s) | 446 |
| BglII | AGATCT | 3 cut(s) | 213, 876, 1024 |
| BisI | GCNGC | 7 cut(s) | 701, 717, 903, 1055, 1139, 1245, 1302 |
| BlnI | CCTAGG | 1 cut(s) | 647 |
| BlsI | GCNGC | 7 cut(s) | 702, 718, 904, 1056, 1140, 1246, 1303 |
| BmcAI | AGTACT | 1 cut(s) | 41 |
| Bme1390I | CCNGG | 1 cut(s) | 343 |
| BmgT120I | GGNCC | 1 cut(s) | 400 |
| BmiI | GGNNCC | 3 cut(s) | 7, 165, 764 |
| BmrFI | CCNGG | 1 cut(s) | 343 |
| BmsI | GCATC | 2 cut(s) | 675, 804 |
| BpiI | GAAGAC | 1 cut(s) | 989 |
| Bpu14I | TTCGAA | 1 cut(s) | 1009 |
| BpuMI | CCSGG | 1 cut(s) | 343 |
| Bsa29I | ATCGAT | 1 cut(s) | 1173 |
| BsaBI | GATNNNNATC | 3 cut(s) | 190, 381, 596 |
| BsaI | GGTCTC | 1 cut(s) | 371 |
| BsaJI | CCNNGG | 2 cut(s) | 647, 822 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 409, 839, 1204 |
| Bse1I | ACTGG | 1 cut(s) | 85 |
| Bse21I | CCTNAGG | 1 cut(s) | 57 |
| Bse3DI | GCAATG | 1 cut(s) | 891 |
| Bse8I | GATNNNNATC | 3 cut(s) | 190, 381, 596 |
| BseCI | ATCGAT | 1 cut(s) | 1173 |
| BseDI | CCNNGG | 2 cut(s) | 647, 822 |
| BseGI | GGATG | 2 cut(s) | 643, 1000 |
| BseJI | GATNNNNATC | 3 cut(s) | 190, 381, 596 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 409, 839, 1204 |
| BseMI | GCAATG | 1 cut(s) | 891 |
| BseMII | CTCAG | 5 cut(s) | 48, 168, 241, 864, 1113 |
| BseNI | ACTGG | 1 cut(s) | 85 |
| BseRI | GAGGAG | 1 cut(s) | 74 |
| BseXI | GCAGC | 5 cut(s) | 914, 1041, 1150, 1231, 1288 |
| Bsh1236I | CGCG | 1 cut(s) | 1212 |
| BshFI | GGCC | 2 cut(s) | 401, 716 |
| BshVI | ATCGAT | 1 cut(s) | 1173 |
| BsiSI | CCGG | 1 cut(s) | 342 |
| BslFI | GGGAC | 1 cut(s) | 1103 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 409, 839, 1204 |
| BsmAI | GTCTC | 4 cut(s) | 107, 230, 371, 1281 |
| BsmBI | CGTCTC | 1 cut(s) | 230 |
| BsmFI | GGGAC | 1 cut(s) | 1103 |
| BsnI | GGCC | 2 cut(s) | 401, 716 |
| Bso31I | GGTCTC | 1 cut(s) | 371 |
| Bsp119I | TTCGAA | 1 cut(s) | 1009 |
| Bsp143I | GATC | 9 cut(s) | 118, 213, 547, 651, 868, 876, 997, 1024, 1186 |
| BspACI | CCGC | 4 cut(s) | 700, 717, 758, 1212 |
| BspANI | GGCC | 2 cut(s) | 401, 716 |
| BspCNI | CTCAG | 5 cut(s) | 49, 169, 240, 865, 1114 |
| BspDI | ATCGAT | 1 cut(s) | 1173 |
| BspFNI | CGCG | 1 cut(s) | 1212 |
| BspLI | GGNNCC | 3 cut(s) | 7, 165, 764 |
| BspPI | GGATC | 4 cut(s) | 113, 659, 863, 992 |
| BspQI | GCTCTTC | 1 cut(s) | 45 |
| BspT104I | TTCGAA | 1 cut(s) | 1009 |
| BspTI | CTTAAG | 1 cut(s) | 446 |
| BspTNI | GGTCTC | 1 cut(s) | 371 |
| BsrBI | CCGCTC | 1 cut(s) | 700 |
| BsrDI | GCAATG | 1 cut(s) | 891 |
| BsrI | ACTGG | 1 cut(s) | 85 |
| BssECI | CCNNGG | 2 cut(s) | 647, 822 |
| BssMI | GATC | 9 cut(s) | 118, 213, 547, 651, 868, 876, 997, 1024, 1186 |
| BssNAI | GTATAC | 1 cut(s) | 776 |
| BssT1I | CCWWGG | 1 cut(s) | 647 |
| Bst1107I | GTATAC | 1 cut(s) | 776 |
| Bst4CI | ACNGT | 3 cut(s) | 208, 224, 305 |
| Bst6I | CTCTTC | 2 cut(s) | 45, 402 |
| BstAFI | CTTAAG | 1 cut(s) | 446 |
| BstBI | TTCGAA | 1 cut(s) | 1009 |
| BstDEI | CTNAG | 5 cut(s) | 57, 177, 227, 873, 1122 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 407 |
| BstF5I | GGATG | 2 cut(s) | 643, 1000 |
| BstFNI | CGCG | 1 cut(s) | 1212 |
| BstH2I | RGCGCY | 1 cut(s) | 134 |
| BstHHI | GCGC | 2 cut(s) | 133, 1212 |
| BstKTI | GATC | 9 cut(s) | 121, 216, 550, 654, 871, 879, 1000, 1027, 1189 |
| BstMAI | GTCTC | 4 cut(s) | 107, 230, 371, 1281 |
| BstMBI | GATC | 9 cut(s) | 118, 213, 547, 651, 868, 876, 997, 1024, 1186 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 61, 716, 1207 |
| BstSCI | CCNGG | 1 cut(s) | 341 |
| BstSFI | CTRYAG | 1 cut(s) | 720 |
| BstUI | CGCG | 1 cut(s) | 1212 |
| BstV1I | GCAGC | 5 cut(s) | 914, 1041, 1150, 1231, 1288 |
| BstV2I | GAAGAC | 1 cut(s) | 989 |
| BstX2I | RGATCY | 3 cut(s) | 213, 876, 1024 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 106 |
| BstYI | RGATCY | 3 cut(s) | 213, 876, 1024 |
| BstZ17I | GTATAC | 1 cut(s) | 776 |
| Bsu15I | ATCGAT | 1 cut(s) | 1173 |
| Bsu36I | CCTNAGG | 1 cut(s) | 57 |
| BsuRI | GGCC | 2 cut(s) | 401, 716 |
| BsuTUI | ATCGAT | 1 cut(s) | 1173 |
| BtsCI | GGATG | 2 cut(s) | 643, 1000 |
| BtsI | GCAGTG | 1 cut(s) | 710 |
| BtsIMutI | CAGTG | 2 cut(s) | 310, 710 |
| CfoI | GCGC | 2 cut(s) | 133, 1212 |
| Cfr13I | GGNCC | 1 cut(s) | 400 |
| ClaI | ATCGAT | 1 cut(s) | 1173 |
| Csp6I | GTAC | 4 cut(s) | 40, 540, 962, 1075 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 503, 538 |
| CviAII | CATG | 3 cut(s) | 160, 655, 1204 |
| CviQI | GTAC | 4 cut(s) | 40, 540, 962, 1075 |
| DdeI | CTNAG | 5 cut(s) | 57, 177, 227, 873, 1122 |
| DpnI | GATC | 9 cut(s) | 120, 215, 549, 653, 870, 878, 999, 1026, 1188 |
| DpnII | GATC | 9 cut(s) | 118, 213, 547, 651, 868, 876, 997, 1024, 1186 |
| DraI | TTTAAA | 1 cut(s) | 190 |
| Eam1104I | CTCTTC | 2 cut(s) | 45, 402 |
| EarI | CTCTTC | 2 cut(s) | 45, 402 |
| Eco130I | CCWWGG | 1 cut(s) | 647 |
| Eco31I | GGTCTC | 1 cut(s) | 371 |
| Eco47III | AGCGCT | 1 cut(s) | 132 |
| Eco57I | CTGAAG | 2 cut(s) | 966, 1292 |
| Eco81I | CCTNAGG | 1 cut(s) | 57 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 407 |
| EcoO109I | RGGNCCY | 1 cut(s) | 400 |
| EcoRI | GAATTC | 1 cut(s) | 1089 |
| EcoT14I | CCWWGG | 1 cut(s) | 647 |
| EcoT22I | ATGCAT | 1 cut(s) | 690 |
| ErhI | CCWWGG | 1 cut(s) | 647 |
| Esp3I | CGTCTC | 1 cut(s) | 230 |
| FaeI | CATG | 3 cut(s) | 163, 658, 1207 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 117, 149, 1041, 1073 |
| FaqI | GGGAC | 1 cut(s) | 1103 |
| FatI | CATG | 3 cut(s) | 159, 654, 1203 |
| FauI | CCCGC | 1 cut(s) | 751 |
| FauNDI | CATATG | 1 cut(s) | 690 |
| FbaI | TGATCA | 2 cut(s) | 547, 1186 |
| FblI | GTMKAC | 1 cut(s) | 775 |
| Fnu4HI | GCNGC | 7 cut(s) | 701, 717, 903, 1055, 1139, 1245, 1302 |
| FokI | GGATG | 2 cut(s) | 630, 1007 |
| Fsp4HI | GCNGC | 7 cut(s) | 701, 717, 903, 1055, 1139, 1245, 1302 |
| FspBI | CTAG | 2 cut(s) | 351, 648 |
| GlaI | GCGC | 2 cut(s) | 132, 1211 |
| GluI | GCNGC | 7 cut(s) | 701, 717, 903, 1055, 1139, 1245, 1302 |
| HaeII | RGCGCY | 1 cut(s) | 134 |
| HaeIII | GGCC | 2 cut(s) | 401, 716 |
| HapII | CCGG | 1 cut(s) | 342 |
| HhaI | GCGC | 2 cut(s) | 133, 1212 |
| Hin1II | CATG | 3 cut(s) | 163, 658, 1207 |
| Hin6I | GCGC | 2 cut(s) | 131, 1210 |
| HinP1I | GCGC | 2 cut(s) | 131, 1210 |
| HincII | GTYRAC | 2 cut(s) | 270, 566 |
| HindII | GTYRAC | 2 cut(s) | 270, 566 |
| HindIII | AAGCTT | 2 cut(s) | 449, 735 |
| HinfI | GANTC | 4 cut(s) | 33, 251, 592, 1083 |
| HpaII | CCGG | 1 cut(s) | 342 |
| HphI | GGTGA | 2 cut(s) | 1204, 1226 |
| Hpy166II | GTNNAC | 5 cut(s) | 270, 566, 776, 1077, 1195 |
| Hpy188I | TCNGA | 7 cut(s) | 10, 46, 357, 387, 823, 946, 1088 |
| Hpy188III | TCNNGA | 8 cut(s) | 122, 138, 229, 436, 668, 742, 845, 872 |
| Hpy8I | GTNNAC | 5 cut(s) | 270, 566, 776, 1077, 1195 |
| HpyAV | CCTTC | 6 cut(s) | 119, 499, 941, 1105, 1219, 1224 |
| HpyCH4III | ACNGT | 3 cut(s) | 208, 224, 305 |
| HpyCH4IV | ACGT | 1 cut(s) | 69 |
| HpyCH4V | TGCA | 6 cut(s) | 373, 456, 584, 623, 688, 817 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 61, 716, 1207 |
| HpyF3I | CTNAG | 5 cut(s) | 57, 177, 227, 873, 1122 |
| HpySE526I | ACGT | 1 cut(s) | 69 |
| Hsp92II | CATG | 3 cut(s) | 163, 658, 1207 |
| HspAI | GCGC | 2 cut(s) | 131, 1210 |
| Ksp22I | TGATCA | 2 cut(s) | 547, 1186 |
| Kzo9I | GATC | 9 cut(s) | 118, 213, 547, 651, 868, 876, 997, 1024, 1186 |
| LguI | GCTCTTC | 1 cut(s) | 45 |
| LmnI | GCTCC | 4 cut(s) | 61, 128, 163, 1207 |
| Lsp1109I | GCAGC | 5 cut(s) | 914, 1041, 1150, 1231, 1288 |
| LweI | GCATC | 2 cut(s) | 675, 804 |
| MaeI | CTAG | 2 cut(s) | 351, 648 |
| MaeII | ACGT | 1 cut(s) | 69 |
| MaeIII | GTNAC | 2 cut(s) | 289, 1214 |
| MalI | GATC | 9 cut(s) | 120, 215, 549, 653, 870, 878, 999, 1026, 1188 |
| MbiI | CCGCTC | 1 cut(s) | 700 |
| MboI | GATC | 9 cut(s) | 118, 213, 547, 651, 868, 876, 997, 1024, 1186 |
| MboII | GAAGA | 9 cut(s) | 62, 158, 223, 419, 545, 994, 1034, 1045, 1246 |
| MfeI | CAATTG | 1 cut(s) | 585 |
| MflI | RGATCY | 3 cut(s) | 213, 876, 1024 |
| Mph1103I | ATGCAT | 1 cut(s) | 690 |
| MroXI | GAANNNNTTC | 1 cut(s) | 153 |
| MseI | TTAA | 5 cut(s) | 189, 447, 828, 1059, 1113 |
| MspA1I | CMGCKG | 1 cut(s) | 287 |
| MspCI | CTTAAG | 1 cut(s) | 446 |
| MspI | CCGG | 1 cut(s) | 342 |
| MspR9I | CCNGG | 1 cut(s) | 343 |
| MunI | CAATTG | 1 cut(s) | 585 |
| MvnI | CGCG | 1 cut(s) | 1212 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 61, 716, 1207 |
| NciI | CCSGG | 1 cut(s) | 343 |
| NdeI | CATATG | 1 cut(s) | 690 |
| NdeII | GATC | 9 cut(s) | 118, 213, 547, 651, 868, 876, 997, 1024, 1186 |
| NlaIII | CATG | 3 cut(s) | 163, 658, 1207 |
| NlaIV | GGNNCC | 3 cut(s) | 7, 165, 764 |
| NmuCI | GTSAC | 1 cut(s) | 1214 |
| NsiI | ATGCAT | 1 cut(s) | 690 |
| NspV | TTCGAA | 1 cut(s) | 1009 |
| PciSI | GCTCTTC | 1 cut(s) | 45 |
| PdmI | GAANNNNTTC | 1 cut(s) | 153 |
| PfeI | GAWTC | 4 cut(s) | 33, 251, 592, 1083 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 839, 1204 |
| PkrI | GCNGC | 7 cut(s) | 702, 718, 904, 1056, 1140, 1246, 1303 |
| PspN4I | GGNNCC | 3 cut(s) | 7, 165, 764 |
| PspPI | GGNCC | 1 cut(s) | 400 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 74, 106 |
| PsuI | RGATCY | 3 cut(s) | 213, 876, 1024 |
| PvuII | CAGCTG | 1 cut(s) | 287 |
| RsaI | GTAC | 4 cut(s) | 41, 541, 963, 1076 |
| RsaNI | GTAC | 4 cut(s) | 40, 540, 962, 1075 |
| SapI | GCTCTTC | 1 cut(s) | 45 |
| SaqAI | TTAA | 5 cut(s) | 189, 447, 828, 1059, 1113 |
| SatI | GCNGC | 7 cut(s) | 701, 717, 903, 1055, 1139, 1245, 1302 |
| Sau3AI | GATC | 9 cut(s) | 118, 213, 547, 651, 868, 876, 997, 1024, 1186 |
| Sau96I | GGNCC | 1 cut(s) | 400 |
| ScaI | AGTACT | 1 cut(s) | 41 |
| ScrFI | CCNGG | 1 cut(s) | 343 |
| SfaNI | GCATC | 2 cut(s) | 675, 804 |
| SfcI | CTRYAG | 1 cut(s) | 720 |
| SfuI | TTCGAA | 1 cut(s) | 1009 |
| SmiI | ATTTAAAT | 1 cut(s) | 190 |
| SmlI | CTYRAG | 1 cut(s) | 446 |
| SmoI | CTYRAG | 1 cut(s) | 446 |
| SsiI | CCGC | 4 cut(s) | 700, 717, 758, 1212 |
| SspI | AATATT | 2 cut(s) | 791, 1039 |
| SspMI | CTAG | 2 cut(s) | 351, 648 |
| StyD4I | CCNGG | 1 cut(s) | 341 |
| StyI | CCWWGG | 1 cut(s) | 647 |
| SwaI | ATTTAAAT | 1 cut(s) | 190 |
| TaaI | ACNGT | 3 cut(s) | 208, 224, 305 |
| TaiI | ACGT | 1 cut(s) | 72 |
| TaqI | TCGA | 4 cut(s) | 36, 1009, 1173, 1223 |
| TatI | WGTACW | 1 cut(s) | 39 |
| TauI | GCSGC | 2 cut(s) | 703, 719 |
| TfiI | GAWTC | 4 cut(s) | 33, 251, 592, 1083 |
| Tru1I | TTAA | 5 cut(s) | 189, 447, 828, 1059, 1113 |
| Tru9I | TTAA | 5 cut(s) | 189, 447, 828, 1059, 1113 |
| TscAI | CASTG | 2 cut(s) | 310, 710 |
| TseFI | GTSAC | 1 cut(s) | 1214 |
| TseI | GCWGC | 5 cut(s) | 902, 1054, 1138, 1244, 1301 |
| Tsp45I | GTSAC | 1 cut(s) | 1214 |
| TspDTI | ATGAA | 4 cut(s) | 243, 768, 994, 1087 |
| TspGWI | ACGGA | 2 cut(s) | 45, 310 |
| TspRI | CASTG | 2 cut(s) | 310, 710 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 839, 1204 |
| Vha464I | CTTAAG | 1 cut(s) | 446 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 407 |
| XapI | RAATTY | 3 cut(s) | 459, 940, 1089 |
| XmaJI | CCTAGG | 1 cut(s) | 647 |
| XmiI | GTMKAC | 1 cut(s) | 775 |
| XmnI | GAANNNNTTC | 1 cut(s) | 153 |
| XspI | CTAG | 2 cut(s) | 351, 648 |
| ZrmI | AGTACT | 1 cut(s) | 41 |
| Zsp2I | ATGCAT | 1 cut(s) | 690 |