Cop9 signalosome complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G26990 |
| fragaria_vesca | FvH4_4g27570 |
| malus_domestica | MD00G1108200.v1.1 MD03G1163800.v1.1 MD11G1176300.v1.1 |
| prunus_persica | Prupe.6G156800_v2.0.a1 Prupe.6G156800_v2.0.a1 |
| pyrus_communis | pycom11g15960 pycom11g16000 |
| rosa_chinensis | RchiOBHm_Chr4g0435421 RchiOBHm_Chr5g0050051 |
| rosa_laevigata | RLG00000006594 RLG00000034682 |
| rosa_multiflora | Rmu_sc0000333.1_g000008 Rmu_sc0001940.1_g000023 Rmu_sc0009623.1_g000002 Rmu_sc0016267.1_g000001 Rmu_sc0036582.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00031080 Rroxscaffold_5G00376660 |
| rosa_rugosa | Rorug04G0284900 Rorug05G0256900 |
| rosa_samantha | Rh4AG340600 Rh4BG348900 Rh4CG363400 Rh4DG343100 Rh5AG330100 Rh5BG340800 Rh5CG367400 Rh5DG353500 |
| rosa_wichuraiana | Rw4G029700 Rw5G031150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 887, 1228 |
| AccI | GTMKAC | 1 cut(s) | 823 |
| AccII | CGCG | 1 cut(s) | 1236 |
| AciI | CCGC | 3 cut(s) | 765, 806, 1236 |
| AclWI | GGATC | 3 cut(s) | 128, 911, 1016 |
| AcsI | RAATTY | 3 cut(s) | 474, 987, 1113 |
| AcuI | CTGAAG | 2 cut(s) | 1013, 1316 |
| AfaI | GTAC | 4 cut(s) | 56, 556, 617, 1100 |
| AfeI | AGCGCT | 1 cut(s) | 147 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 309, 424, 887, 1228 |
| AflII | CTTAAG | 1 cut(s) | 461 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 747 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1125, 1157 |
| AluBI | AGCT | 8 cut(s) | 365, 466, 643, 665, 785, 1165, 1225, 1294 |
| AluI | AGCT | 8 cut(s) | 365, 466, 643, 665, 785, 1165, 1225, 1294 |
| Alw26I | GTCTC | 5 cut(s) | 122, 245, 386, 617, 1305 |
| AlwI | GGATC | 3 cut(s) | 128, 911, 1016 |
| Aor51HI | AGCGCT | 1 cut(s) | 147 |
| AoxI | GGCC | 2 cut(s) | 414, 762 |
| ApeKI | GCWGC | 5 cut(s) | 5, 950, 1078, 1162, 1268 |
| ApoI | RAATTY | 3 cut(s) | 474, 987, 1113 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 168, 987 |
| AspLEI | GCGC | 2 cut(s) | 148, 1236 |
| AspS9I | GGNCC | 1 cut(s) | 415 |
| AsuC2I | CCSGG | 1 cut(s) | 358 |
| AsuHPI | GGTGA | 2 cut(s) | 1228, 1250 |
| AsuII | TTCGAA | 2 cut(s) | 981, 1033 |
| AxyI | CCTNAGG | 1 cut(s) | 72 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 218, 250 |
| BbsI | GAAGAC | 1 cut(s) | 1013 |
| BbvI | GCAGC | 5 cut(s) | 17, 962, 1065, 1174, 1255 |
| BccI | CCATC | 4 cut(s) | 256, 545, 881, 1193 |
| BceAI | ACGGC | 4 cut(s) | 287, 889, 1081, 1256 |
| BclI | TGATCA | 2 cut(s) | 562, 1210 |
| BcnI | CCSGG | 1 cut(s) | 358 |
| BcoDI | GTCTC | 5 cut(s) | 122, 245, 386, 617, 1305 |
| BfaI | CTAG | 2 cut(s) | 366, 696 |
| BfoI | RGCGCY | 1 cut(s) | 149 |
| BfrI | CTTAAG | 1 cut(s) | 461 |
| BglII | AGATCT | 3 cut(s) | 228, 924, 1048 |
| BisI | GCNGC | 6 cut(s) | 6, 765, 951, 1079, 1163, 1269 |
| BlsI | GCNGC | 6 cut(s) | 7, 766, 952, 1080, 1164, 1270 |
| BmcAI | AGTACT | 1 cut(s) | 56 |
| Bme1390I | CCNGG | 1 cut(s) | 358 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 747 |
| BmgT120I | GGNCC | 1 cut(s) | 415 |
| BmiI | GGNNCC | 2 cut(s) | 180, 812 |
| BmrFI | CCNGG | 1 cut(s) | 358 |
| BmsI | GCATC | 2 cut(s) | 723, 852 |
| BpiI | GAAGAC | 1 cut(s) | 1013 |
| Bpu14I | TTCGAA | 2 cut(s) | 981, 1033 |
| BpuMI | CCSGG | 1 cut(s) | 358 |
| Bsa29I | ATCGAT | 1 cut(s) | 1197 |
| BsaBI | GATNNNNATC | 2 cut(s) | 205, 396 |
| BsaI | GGTCTC | 1 cut(s) | 386 |
| BsaJI | CCNNGG | 1 cut(s) | 870 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 309, 424, 887, 1228 |
| Bse1I | ACTGG | 1 cut(s) | 100 |
| Bse21I | CCTNAGG | 1 cut(s) | 72 |
| Bse3DI | GCAATG | 1 cut(s) | 939 |
| Bse8I | GATNNNNATC | 2 cut(s) | 205, 396 |
| BseCI | ATCGAT | 1 cut(s) | 1197 |
| BseDI | CCNNGG | 1 cut(s) | 870 |
| BseGI | GGATG | 2 cut(s) | 691, 1024 |
| BseJI | GATNNNNATC | 2 cut(s) | 205, 396 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 309, 424, 887, 1228 |
| BseMI | GCAATG | 1 cut(s) | 939 |
| BseMII | CTCAG | 6 cut(s) | 63, 183, 256, 612, 912, 1137 |
| BseNI | ACTGG | 1 cut(s) | 100 |
| BseRI | GAGGAG | 1 cut(s) | 89 |
| BseXI | GCAGC | 5 cut(s) | 17, 962, 1065, 1174, 1255 |
| Bsh1236I | CGCG | 1 cut(s) | 1236 |
| BshFI | GGCC | 2 cut(s) | 416, 764 |
| BshVI | ATCGAT | 1 cut(s) | 1197 |
| BsiSI | CCGG | 1 cut(s) | 357 |
| BslFI | GGGAC | 1 cut(s) | 1127 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 309, 424, 887, 1228 |
| BsmAI | GTCTC | 5 cut(s) | 122, 245, 386, 617, 1305 |
| BsmBI | CGTCTC | 1 cut(s) | 245 |
| BsmFI | GGGAC | 1 cut(s) | 1127 |
| BsnI | GGCC | 2 cut(s) | 416, 764 |
| Bso31I | GGTCTC | 1 cut(s) | 386 |
| Bsp119I | TTCGAA | 2 cut(s) | 981, 1033 |
| Bsp1407I | TGTACA | 1 cut(s) | 615 |
| Bsp143I | GATC | 8 cut(s) | 133, 228, 562, 916, 924, 1021, 1048, 1210 |
| BspACI | CCGC | 3 cut(s) | 765, 806, 1236 |
| BspANI | GGCC | 2 cut(s) | 416, 764 |
| BspCNI | CTCAG | 6 cut(s) | 64, 184, 255, 613, 913, 1138 |
| BspDI | ATCGAT | 1 cut(s) | 1197 |
| BspFNI | CGCG | 1 cut(s) | 1236 |
| BspLI | GGNNCC | 2 cut(s) | 180, 812 |
| BspPI | GGATC | 3 cut(s) | 128, 911, 1016 |
| BspQI | GCTCTTC | 1 cut(s) | 60 |
| BspT104I | TTCGAA | 2 cut(s) | 981, 1033 |
| BspTI | CTTAAG | 1 cut(s) | 461 |
| BspTNI | GGTCTC | 1 cut(s) | 386 |
| BsrDI | GCAATG | 1 cut(s) | 939 |
| BsrGI | TGTACA | 1 cut(s) | 615 |
| BsrI | ACTGG | 1 cut(s) | 100 |
| BssECI | CCNNGG | 1 cut(s) | 870 |
| BssMI | GATC | 8 cut(s) | 133, 228, 562, 916, 924, 1021, 1048, 1210 |
| BssNAI | GTATAC | 1 cut(s) | 824 |
| Bst1107I | GTATAC | 1 cut(s) | 824 |
| Bst4CI | ACNGT | 3 cut(s) | 223, 239, 320 |
| Bst6I | CTCTTC | 3 cut(s) | 60, 417, 989 |
| BstAFI | CTTAAG | 1 cut(s) | 461 |
| BstAUI | TGTACA | 1 cut(s) | 615 |
| BstBI | TTCGAA | 2 cut(s) | 981, 1033 |
| BstDEI | CTNAG | 6 cut(s) | 72, 192, 242, 621, 921, 1146 |
| BstEII | GGTNACC | 1 cut(s) | 1319 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 422 |
| BstF5I | GGATG | 2 cut(s) | 691, 1024 |
| BstFNI | CGCG | 1 cut(s) | 1236 |
| BstH2I | RGCGCY | 1 cut(s) | 149 |
| BstHHI | GCGC | 2 cut(s) | 148, 1236 |
| BstKTI | GATC | 8 cut(s) | 136, 231, 565, 919, 927, 1024, 1051, 1213 |
| BstMAI | GTCTC | 5 cut(s) | 122, 245, 386, 617, 1305 |
| BstMBI | GATC | 8 cut(s) | 133, 228, 562, 916, 924, 1021, 1048, 1210 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 76, 764, 1231 |
| BstNSI | RCATGY | 1 cut(s) | 16 |
| BstPI | GGTNACC | 1 cut(s) | 1319 |
| BstSCI | CCNGG | 1 cut(s) | 356 |
| BstUI | CGCG | 1 cut(s) | 1236 |
| BstV1I | GCAGC | 5 cut(s) | 17, 962, 1065, 1174, 1255 |
| BstV2I | GAAGAC | 1 cut(s) | 1013 |
| BstX2I | RGATCY | 3 cut(s) | 228, 924, 1048 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 121 |
| BstYI | RGATCY | 3 cut(s) | 228, 924, 1048 |
| BstZ17I | GTATAC | 1 cut(s) | 824 |
| Bsu15I | ATCGAT | 1 cut(s) | 1197 |
| Bsu36I | CCTNAGG | 1 cut(s) | 72 |
| BsuRI | GGCC | 2 cut(s) | 416, 764 |
| BsuTUI | ATCGAT | 1 cut(s) | 1197 |
| BtsCI | GGATG | 2 cut(s) | 691, 1024 |
| BtsIMutI | CAGTG | 3 cut(s) | 325, 618, 758 |
| CfoI | GCGC | 2 cut(s) | 148, 1236 |
| Cfr13I | GGNCC | 1 cut(s) | 415 |
| ClaI | ATCGAT | 1 cut(s) | 1197 |
| CseI | GACGC | 1 cut(s) | 737 |
| Csp6I | GTAC | 4 cut(s) | 55, 555, 616, 1099 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 518, 553 |
| CviAII | CATG | 4 cut(s) | 13, 175, 703, 1228 |
| CviQI | GTAC | 4 cut(s) | 55, 555, 616, 1099 |
| DdeI | CTNAG | 6 cut(s) | 72, 192, 242, 621, 921, 1146 |
| DpnI | GATC | 8 cut(s) | 135, 230, 564, 918, 926, 1023, 1050, 1212 |
| DpnII | GATC | 8 cut(s) | 133, 228, 562, 916, 924, 1021, 1048, 1210 |
| DraI | TTTAAA | 1 cut(s) | 205 |
| DriI | GACNNNNNGTC | 1 cut(s) | 747 |
| Eam1104I | CTCTTC | 3 cut(s) | 60, 417, 989 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 747 |
| EarI | CTCTTC | 3 cut(s) | 60, 417, 989 |
| Eco31I | GGTCTC | 1 cut(s) | 386 |
| Eco47III | AGCGCT | 1 cut(s) | 147 |
| Eco57I | CTGAAG | 2 cut(s) | 1013, 1316 |
| Eco81I | CCTNAGG | 1 cut(s) | 72 |
| Eco91I | GGTNACC | 1 cut(s) | 1319 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 422 |
| EcoO109I | RGGNCCY | 1 cut(s) | 415 |
| EcoO65I | GGTNACC | 1 cut(s) | 1319 |
| EcoRI | GAATTC | 1 cut(s) | 1113 |
| EcoT22I | ATGCAT | 1 cut(s) | 738 |
| Esp3I | CGTCTC | 1 cut(s) | 245 |
| FaeI | CATG | 4 cut(s) | 16, 178, 706, 1231 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 132, 164, 1065, 1097 |
| FaqI | GGGAC | 1 cut(s) | 1127 |
| FatI | CATG | 4 cut(s) | 12, 174, 702, 1227 |
| FauI | CCCGC | 1 cut(s) | 799 |
| FauNDI | CATATG | 1 cut(s) | 738 |
| FbaI | TGATCA | 2 cut(s) | 562, 1210 |
| FblI | GTMKAC | 1 cut(s) | 823 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 765, 951, 1079, 1163, 1269 |
| FokI | GGATG | 2 cut(s) | 678, 1031 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 765, 951, 1079, 1163, 1269 |
| FspBI | CTAG | 2 cut(s) | 366, 696 |
| GlaI | GCGC | 2 cut(s) | 147, 1235 |
| GluI | GCNGC | 6 cut(s) | 6, 765, 951, 1079, 1163, 1269 |
| HaeII | RGCGCY | 1 cut(s) | 149 |
| HaeIII | GGCC | 2 cut(s) | 416, 764 |
| HapII | CCGG | 1 cut(s) | 357 |
| HgaI | GACGC | 1 cut(s) | 737 |
| HhaI | GCGC | 2 cut(s) | 148, 1236 |
| Hin1II | CATG | 4 cut(s) | 16, 178, 706, 1231 |
| Hin6I | GCGC | 2 cut(s) | 146, 1234 |
| HinP1I | GCGC | 2 cut(s) | 146, 1234 |
| HincII | GTYRAC | 2 cut(s) | 285, 581 |
| HindII | GTYRAC | 2 cut(s) | 285, 581 |
| HindIII | AAGCTT | 2 cut(s) | 464, 783 |
| HinfI | GANTC | 5 cut(s) | 48, 266, 607, 699, 1107 |
| HpaII | CCGG | 1 cut(s) | 357 |
| HphI | GGTGA | 2 cut(s) | 1228, 1250 |
| Hpy166II | GTNNAC | 6 cut(s) | 285, 581, 618, 824, 1101, 1219 |
| Hpy188I | TCNGA | 6 cut(s) | 61, 372, 402, 871, 993, 1112 |
| Hpy188III | TCNNGA | 8 cut(s) | 137, 153, 244, 451, 716, 790, 893, 920 |
| Hpy8I | GTNNAC | 6 cut(s) | 285, 581, 618, 824, 1101, 1219 |
| HpyAV | CCTTC | 5 cut(s) | 134, 514, 1129, 1243, 1248 |
| HpyCH4III | ACNGT | 3 cut(s) | 223, 239, 320 |
| HpyCH4IV | ACGT | 1 cut(s) | 84 |
| HpyCH4V | TGCA | 7 cut(s) | 16, 388, 471, 599, 671, 736, 865 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 76, 764, 1231 |
| HpyF3I | CTNAG | 6 cut(s) | 72, 192, 242, 621, 921, 1146 |
| HpySE526I | ACGT | 1 cut(s) | 84 |
| Hsp92II | CATG | 4 cut(s) | 16, 178, 706, 1231 |
| HspAI | GCGC | 2 cut(s) | 146, 1234 |
| Ksp22I | TGATCA | 2 cut(s) | 562, 1210 |
| Kzo9I | GATC | 8 cut(s) | 133, 228, 562, 916, 924, 1021, 1048, 1210 |
| LguI | GCTCTTC | 1 cut(s) | 60 |
| LmnI | GCTCC | 4 cut(s) | 76, 143, 178, 1231 |
| Lsp1109I | GCAGC | 5 cut(s) | 17, 962, 1065, 1174, 1255 |
| LweI | GCATC | 2 cut(s) | 723, 852 |
| MaeI | CTAG | 2 cut(s) | 366, 696 |
| MaeII | ACGT | 1 cut(s) | 84 |
| MaeIII | GTNAC | 3 cut(s) | 304, 1238, 1319 |
| MalI | GATC | 8 cut(s) | 135, 230, 564, 918, 926, 1023, 1050, 1212 |
| MboI | GATC | 8 cut(s) | 133, 228, 562, 916, 924, 1021, 1048, 1210 |
| MfeI | CAATTG | 1 cut(s) | 600 |
| MflI | RGATCY | 3 cut(s) | 228, 924, 1048 |
| Mph1103I | ATGCAT | 1 cut(s) | 738 |
| MroXI | GAANNNNTTC | 2 cut(s) | 168, 987 |
| MseI | TTAA | 5 cut(s) | 204, 462, 876, 1083, 1137 |
| MspA1I | CMGCKG | 1 cut(s) | 1294 |
| MspCI | CTTAAG | 1 cut(s) | 461 |
| MspI | CCGG | 1 cut(s) | 357 |
| MspR9I | CCNGG | 1 cut(s) | 358 |
| MunI | CAATTG | 1 cut(s) | 600 |
| MvnI | CGCG | 1 cut(s) | 1236 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 76, 764, 1231 |
| NciI | CCSGG | 1 cut(s) | 358 |
| NdeI | CATATG | 1 cut(s) | 738 |
| NdeII | GATC | 8 cut(s) | 133, 228, 562, 916, 924, 1021, 1048, 1210 |
| NlaIII | CATG | 4 cut(s) | 16, 178, 706, 1231 |
| NlaIV | GGNNCC | 2 cut(s) | 180, 812 |
| NmuCI | GTSAC | 1 cut(s) | 1238 |
| NsiI | ATGCAT | 1 cut(s) | 738 |
| NspI | RCATGY | 1 cut(s) | 16 |
| NspV | TTCGAA | 2 cut(s) | 981, 1033 |
| PciSI | GCTCTTC | 1 cut(s) | 60 |
| PdmI | GAANNNNTTC | 2 cut(s) | 168, 987 |
| PfeI | GAWTC | 5 cut(s) | 48, 266, 607, 699, 1107 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 887, 1228 |
| PkrI | GCNGC | 6 cut(s) | 7, 766, 952, 1080, 1164, 1270 |
| PspEI | GGTNACC | 1 cut(s) | 1319 |
| PspN4I | GGNNCC | 2 cut(s) | 180, 812 |
| PspPI | GGNCC | 1 cut(s) | 415 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 89, 121 |
| PsuI | RGATCY | 3 cut(s) | 228, 924, 1048 |
| PvuII | CAGCTG | 1 cut(s) | 1294 |
| RsaI | GTAC | 4 cut(s) | 56, 556, 617, 1100 |
| RsaNI | GTAC | 4 cut(s) | 55, 555, 616, 1099 |
| SapI | GCTCTTC | 1 cut(s) | 60 |
| SaqAI | TTAA | 5 cut(s) | 204, 462, 876, 1083, 1137 |
| SatI | GCNGC | 6 cut(s) | 6, 765, 951, 1079, 1163, 1269 |
| Sau3AI | GATC | 8 cut(s) | 133, 228, 562, 916, 924, 1021, 1048, 1210 |
| Sau96I | GGNCC | 1 cut(s) | 415 |
| ScaI | AGTACT | 1 cut(s) | 56 |
| ScrFI | CCNGG | 1 cut(s) | 358 |
| SfaNI | GCATC | 2 cut(s) | 723, 852 |
| SfuI | TTCGAA | 2 cut(s) | 981, 1033 |
| SmiI | ATTTAAAT | 1 cut(s) | 205 |
| SmlI | CTYRAG | 1 cut(s) | 461 |
| SmoI | CTYRAG | 1 cut(s) | 461 |
| SsiI | CCGC | 3 cut(s) | 765, 806, 1236 |
| SspI | AATATT | 2 cut(s) | 839, 1063 |
| SspMI | CTAG | 2 cut(s) | 366, 696 |
| StyD4I | CCNGG | 1 cut(s) | 356 |
| SwaI | ATTTAAAT | 1 cut(s) | 205 |
| TaaI | ACNGT | 3 cut(s) | 223, 239, 320 |
| TaiI | ACGT | 1 cut(s) | 87 |
| TaqI | TCGA | 5 cut(s) | 51, 981, 1033, 1197, 1247 |
| TatI | WGTACW | 2 cut(s) | 54, 615 |
| TauI | GCSGC | 1 cut(s) | 767 |
| TfiI | GAWTC | 5 cut(s) | 48, 266, 607, 699, 1107 |
| Tru1I | TTAA | 5 cut(s) | 204, 462, 876, 1083, 1137 |
| Tru9I | TTAA | 5 cut(s) | 204, 462, 876, 1083, 1137 |
| TscAI | CASTG | 3 cut(s) | 325, 625, 758 |
| TseFI | GTSAC | 1 cut(s) | 1238 |
| TseI | GCWGC | 5 cut(s) | 5, 950, 1078, 1162, 1268 |
| Tsp45I | GTSAC | 1 cut(s) | 1238 |
| TspDTI | ATGAA | 4 cut(s) | 258, 816, 1018, 1111 |
| TspGWI | ACGGA | 2 cut(s) | 60, 325 |
| TspRI | CASTG | 3 cut(s) | 325, 625, 758 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 887, 1228 |
| Vha464I | CTTAAG | 1 cut(s) | 461 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 422 |
| XapI | RAATTY | 3 cut(s) | 474, 987, 1113 |
| XceI | RCATGY | 1 cut(s) | 16 |
| XmiI | GTMKAC | 1 cut(s) | 823 |
| XmnI | GAANNNNTTC | 2 cut(s) | 168, 987 |
| XspI | CTAG | 2 cut(s) | 366, 696 |
| ZrmI | AGTACT | 1 cut(s) | 56 |
| Zsp2I | ATGCAT | 1 cut(s) | 738 |