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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0146631 RchiOBHm_Chr6g0277681 |
| rosa_laevigata | RLG00000003527 RLG00000029960 |
| rosa_multiflora | Rmu_sc0000929.1_g000001 Rmu_sc0004283.1_g000049 |
| rosa_roxburghii | Rroxscaffold_6G00429930 |
| rosa_samantha | Rh1CG108200 Rh1DG018100 Rh1DG116800 Rh2AG243000 Rh2AG244600 Rh2BG256900 Rh2DG251500 Rh2DG253200 Rh5AG168100 Rh6DG217900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 8, 37 |
| AccI | GTMKAC | 1 cut(s) | 8 |
| AciI | CCGC | 3 cut(s) | 42, 58, 81 |
| AcuI | CTGAAG | 1 cut(s) | 237 |
| AcyI | GRCGYC | 3 cut(s) | 5, 24, 34 |
| AfaI | GTAC | 2 cut(s) | 30, 99 |
| AluBI | AGCT | 2 cut(s) | 175, 203 |
| AluI | AGCT | 2 cut(s) | 175, 203 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 62, 94 |
| AsuHPI | GGTGA | 2 cut(s) | 40, 178 |
| AsuII | TTCGAA | 1 cut(s) | 188 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 12, 44 |
| BauI | CACGAG | 1 cut(s) | 74 |
| BbsI | GAAGAC | 1 cut(s) | 27 |
| BceAI | ACGGC | 3 cut(s) | 11, 29, 145 |
| BglII | AGATCT | 1 cut(s) | 227 |
| BmsI | GCATC | 1 cut(s) | 141 |
| BpiI | GAAGAC | 1 cut(s) | 27 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 138, 170 |
| Bpu14I | TTCGAA | 1 cut(s) | 188 |
| BsaHI | GRCGYC | 3 cut(s) | 5, 24, 34 |
| BsaWI | WCCGGW | 1 cut(s) | 141 |
| BseMII | CTCAG | 1 cut(s) | 215 |
| BsgI | GTGCAG | 1 cut(s) | 195 |
| BsiSI | CCGG | 1 cut(s) | 142 |
| BsiWI | CGTACG | 1 cut(s) | 28 |
| Bsp119I | TTCGAA | 1 cut(s) | 188 |
| Bsp143I | GATC | 1 cut(s) | 227 |
| BspACI | CCGC | 3 cut(s) | 42, 58, 81 |
| BspCNI | CTCAG | 1 cut(s) | 216 |
| BspT104I | TTCGAA | 1 cut(s) | 188 |
| BssMI | GATC | 1 cut(s) | 227 |
| BssNI | GRCGYC | 3 cut(s) | 5, 24, 34 |
| BssSI | CACGAG | 1 cut(s) | 74 |
| Bst2BI | CACGAG | 1 cut(s) | 74 |
| BstACI | GRCGYC | 3 cut(s) | 5, 24, 34 |
| BstBI | TTCGAA | 1 cut(s) | 188 |
| BstDEI | CTNAG | 1 cut(s) | 224 |
| BstKTI | GATC | 1 cut(s) | 230 |
| BstMBI | GATC | 1 cut(s) | 227 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 209 |
| BstV2I | GAAGAC | 1 cut(s) | 27 |
| BstX2I | RGATCY | 1 cut(s) | 227 |
| BstYI | RGATCY | 1 cut(s) | 227 |
| CseI | GACGC | 1 cut(s) | 32 |
| Csp6I | GTAC | 2 cut(s) | 29, 98 |
| CviAII | CATG | 1 cut(s) | 119 |
| CviJI | RGCY | 2 cut(s) | 175, 203 |
| CviKI_1 | RGCY | 2 cut(s) | 175, 203 |
| CviQI | GTAC | 2 cut(s) | 29, 98 |
| DdeI | CTNAG | 1 cut(s) | 224 |
| DpnI | GATC | 1 cut(s) | 229 |
| DpnII | GATC | 1 cut(s) | 227 |
| EciI | GGCGGA | 1 cut(s) | 70 |
| Eco57I | CTGAAG | 1 cut(s) | 237 |
| FaeI | CATG | 1 cut(s) | 122 |
| FaiI | YATR | 1 cut(s) | 120 |
| FatI | CATG | 1 cut(s) | 118 |
| FblI | GTMKAC | 1 cut(s) | 8 |
| HapII | CCGG | 1 cut(s) | 142 |
| HgaI | GACGC | 1 cut(s) | 32 |
| Hin1I | GRCGYC | 3 cut(s) | 5, 24, 34 |
| Hin1II | CATG | 1 cut(s) | 122 |
| HincII | GTYRAC | 1 cut(s) | 9 |
| HindII | GTYRAC | 1 cut(s) | 9 |
| HinfI | GANTC | 4 cut(s) | 70, 77, 93, 126 |
| HpaII | CCGG | 1 cut(s) | 142 |
| HphI | GGTGA | 2 cut(s) | 40, 178 |
| Hpy166II | GTNNAC | 2 cut(s) | 9, 169 |
| Hpy188III | TCNNGA | 2 cut(s) | 74, 196 |
| Hpy8I | GTNNAC | 2 cut(s) | 9, 169 |
| Hpy99I | CGWCG | 4 cut(s) | 10, 36, 39, 166 |
| HpyCH4IV | ACGT | 2 cut(s) | 5, 34 |
| HpyCH4V | TGCA | 3 cut(s) | 132, 138, 212 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 209 |
| HpyF3I | CTNAG | 1 cut(s) | 224 |
| HpySE526I | ACGT | 2 cut(s) | 5, 34 |
| Hsp92I | GRCGYC | 3 cut(s) | 5, 24, 34 |
| Hsp92II | CATG | 1 cut(s) | 122 |
| Kzo9I | GATC | 1 cut(s) | 227 |
| LpnPI | CCDG | 4 cut(s) | 155, 185, 209, 228 |
| LweI | GCATC | 1 cut(s) | 141 |
| MaeII | ACGT | 2 cut(s) | 5, 34 |
| MaeIII | GTNAC | 1 cut(s) | 46 |
| MalI | GATC | 1 cut(s) | 229 |
| MboI | GATC | 1 cut(s) | 227 |
| MboII | GAAGA | 2 cut(s) | 32, 230 |
| MflI | RGATCY | 1 cut(s) | 227 |
| MluCI | AATT | 1 cut(s) | 184 |
| MlyI | GAGTC | 1 cut(s) | 86 |
| MmeI | TCCRAC | 1 cut(s) | 103 |
| MnlI | CCTC | 1 cut(s) | 119 |
| MspI | CCGG | 1 cut(s) | 142 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 209 |
| NdeII | GATC | 1 cut(s) | 227 |
| NlaIII | CATG | 1 cut(s) | 122 |
| NmeAIII | GCCGAG | 1 cut(s) | 109 |
| NmuCI | GTSAC | 1 cut(s) | 46 |
| NspV | TTCGAA | 1 cut(s) | 188 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 81 |
| PfeI | GAWTC | 3 cut(s) | 70, 93, 126 |
| Pfl23II | CGTACG | 1 cut(s) | 28 |
| PleI | GAGTC | 1 cut(s) | 85 |
| PpsI | GAGTC | 1 cut(s) | 85 |
| PspLI | CGTACG | 1 cut(s) | 28 |
| PsuI | RGATCY | 1 cut(s) | 227 |
| RsaI | GTAC | 2 cut(s) | 30, 99 |
| RsaNI | GTAC | 2 cut(s) | 29, 98 |
| SalI | GTCGAC | 1 cut(s) | 7 |
| Sau3AI | GATC | 1 cut(s) | 227 |
| SchI | GAGTC | 1 cut(s) | 86 |
| SetI | ASST | 5 cut(s) | 8, 37, 177, 205, 217 |
| SfaNI | GCATC | 1 cut(s) | 141 |
| SfuI | TTCGAA | 1 cut(s) | 188 |
| Sse9I | AATT | 1 cut(s) | 184 |
| SsiI | CCGC | 3 cut(s) | 42, 58, 81 |
| TaiI | ACGT | 2 cut(s) | 8, 37 |
| TaqI | TCGA | 3 cut(s) | 8, 68, 188 |
| TasI | AATT | 1 cut(s) | 184 |
| TfiI | GAWTC | 3 cut(s) | 70, 93, 126 |
| TseFI | GTSAC | 1 cut(s) | 46 |
| Tsp45I | GTSAC | 1 cut(s) | 46 |
| TspDTI | ATGAA | 2 cut(s) | 107, 195 |
| TspGWI | ACGGA | 1 cut(s) | 32 |
| XmiI | GTMKAC | 1 cut(s) | 8 |
| ZraI | GACGTC | 2 cut(s) | 6, 35 |