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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD08G1226200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0113201 |
| rosa_laevigata | RLG00000013598 RLG00000032863 |
| rosa_roxburghii | Rroxscaffold_7G00200920 |
| rosa_rugosa | Rorug01G0041600 Rorug01G0041700 Rorug01G0041800 Rorug01G0041900 Rorug03G0217700 |
| rosa_samantha | Rh1BG050100 Rh2AG240400 Rh2CG244500 Rh2DG248400 Rh4AG281100 Rh4BG286600 Rh4BG286700 Rh4DG283700 Rh5DG504300 |
| rosa_wichuraiana | Rw0G013010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 142 |
| AciI | CCGC | 1 cut(s) | 68 |
| AcuI | CTGAAG | 1 cut(s) | 174 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 148, 192 |
| AflII | CTTAAG | 1 cut(s) | 55 |
| Alw26I | GTCTC | 1 cut(s) | 103 |
| ApeKI | GCWGC | 1 cut(s) | 182 |
| AspA2I | CCTAGG | 1 cut(s) | 191 |
| AvrII | CCTAGG | 1 cut(s) | 191 |
| BbvI | GCAGC | 1 cut(s) | 169 |
| BccI | CCATC | 1 cut(s) | 25 |
| BcoDI | GTCTC | 1 cut(s) | 103 |
| BfaI | CTAG | 2 cut(s) | 42, 192 |
| BfmI | CTRYAG | 1 cut(s) | 48 |
| BfrI | CTTAAG | 1 cut(s) | 55 |
| BfuAI | ACCTGC | 1 cut(s) | 142 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 179 |
| BglII | AGATCT | 1 cut(s) | 44 |
| BisI | GCNGC | 1 cut(s) | 183 |
| BlnI | CCTAGG | 1 cut(s) | 191 |
| BlsI | GCNGC | 1 cut(s) | 184 |
| BmiI | GGNNCC | 1 cut(s) | 15 |
| BpuEI | CTTGAG | 1 cut(s) | 128 |
| BsaJI | CCNNGG | 1 cut(s) | 191 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 148, 192 |
| BseDI | CCNNGG | 1 cut(s) | 191 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 148, 192 |
| BseXI | GCAGC | 1 cut(s) | 169 |
| BsgI | GTGCAG | 1 cut(s) | 92 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 148, 192 |
| BsmAI | GTCTC | 1 cut(s) | 103 |
| BsmBI | CGTCTC | 1 cut(s) | 103 |
| Bsp143I | GATC | 1 cut(s) | 44 |
| BspACI | CCGC | 1 cut(s) | 68 |
| BspLI | GGNNCC | 1 cut(s) | 15 |
| BspMI | ACCTGC | 1 cut(s) | 142 |
| BspTI | CTTAAG | 1 cut(s) | 55 |
| BssECI | CCNNGG | 1 cut(s) | 191 |
| BssMI | GATC | 1 cut(s) | 44 |
| BssT1I | CCWWGG | 1 cut(s) | 191 |
| Bst4CI | ACNGT | 1 cut(s) | 97 |
| BstAFI | CTTAAG | 1 cut(s) | 55 |
| BstC8I | GCNNGC | 1 cut(s) | 25 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 146 |
| BstKTI | GATC | 1 cut(s) | 47 |
| BstMAI | GTCTC | 1 cut(s) | 103 |
| BstMBI | GATC | 1 cut(s) | 44 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 20, 179 |
| BstSFI | CTRYAG | 1 cut(s) | 48 |
| BstV1I | GCAGC | 1 cut(s) | 169 |
| BstX2I | RGATCY | 1 cut(s) | 44 |
| BstYI | RGATCY | 1 cut(s) | 44 |
| BveI | ACCTGC | 1 cut(s) | 142 |
| Cac8I | GCNNGC | 1 cut(s) | 25 |
| CviAII | CATG | 2 cut(s) | 10, 30 |
| CviJI | RGCY | 5 cut(s) | 14, 53, 152, 173, 182 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 53, 152, 173, 182 |
| DpnI | GATC | 1 cut(s) | 46 |
| DpnII | GATC | 1 cut(s) | 44 |
| Eco130I | CCWWGG | 1 cut(s) | 191 |
| Eco57I | CTGAAG | 1 cut(s) | 174 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 146 |
| EcoT14I | CCWWGG | 1 cut(s) | 191 |
| ErhI | CCWWGG | 1 cut(s) | 191 |
| Esp3I | CGTCTC | 1 cut(s) | 103 |
| FaeI | CATG | 2 cut(s) | 13, 33 |
| FaiI | YATR | 2 cut(s) | 11, 31 |
| FatI | CATG | 2 cut(s) | 9, 29 |
| Fnu4HI | GCNGC | 1 cut(s) | 183 |
| Fsp4HI | GCNGC | 1 cut(s) | 183 |
| FspBI | CTAG | 2 cut(s) | 42, 192 |
| GluI | GCNGC | 1 cut(s) | 183 |
| Hin1II | CATG | 2 cut(s) | 13, 33 |
| Hpy166II | GTNNAC | 1 cut(s) | 131 |
| Hpy188I | TCNGA | 1 cut(s) | 103 |
| Hpy188III | TCNNGA | 1 cut(s) | 145 |
| Hpy8I | GTNNAC | 1 cut(s) | 131 |
| HpyAV | CCTTC | 1 cut(s) | 142 |
| HpyCH4III | ACNGT | 1 cut(s) | 97 |
| HpyCH4IV | ACGT | 1 cut(s) | 82 |
| HpyCH4V | TGCA | 2 cut(s) | 23, 73 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 20, 179 |
| HpySE526I | ACGT | 1 cut(s) | 82 |
| Hsp92II | CATG | 2 cut(s) | 13, 33 |
| Kzo9I | GATC | 1 cut(s) | 44 |
| LmnI | GCTCC | 1 cut(s) | 19 |
| LpnPI | CCDG | 3 cut(s) | 18, 123, 147 |
| Lsp1109I | GCAGC | 1 cut(s) | 169 |
| MaeI | CTAG | 2 cut(s) | 42, 192 |
| MaeII | ACGT | 1 cut(s) | 82 |
| MaeIII | GTNAC | 1 cut(s) | 112 |
| MalI | GATC | 1 cut(s) | 46 |
| MboI | GATC | 1 cut(s) | 44 |
| MflI | RGATCY | 1 cut(s) | 44 |
| MnlI | CCTC | 2 cut(s) | 152, 197 |
| MseI | TTAA | 1 cut(s) | 56 |
| MspCI | CTTAAG | 1 cut(s) | 55 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 20, 179 |
| NdeII | GATC | 1 cut(s) | 44 |
| NlaIII | CATG | 2 cut(s) | 13, 33 |
| NlaIV | GGNNCC | 1 cut(s) | 15 |
| PkrI | GCNGC | 1 cut(s) | 184 |
| PspN4I | GGNNCC | 1 cut(s) | 15 |
| PsuI | RGATCY | 1 cut(s) | 44 |
| SaqAI | TTAA | 1 cut(s) | 56 |
| SatI | GCNGC | 1 cut(s) | 183 |
| Sau3AI | GATC | 1 cut(s) | 44 |
| SetI | ASST | 3 cut(s) | 85, 112, 136 |
| SfcI | CTRYAG | 1 cut(s) | 48 |
| SmlI | CTYRAG | 2 cut(s) | 55, 143 |
| SmoI | CTYRAG | 2 cut(s) | 55, 143 |
| SsiI | CCGC | 1 cut(s) | 68 |
| SspMI | CTAG | 2 cut(s) | 42, 192 |
| StyI | CCWWGG | 1 cut(s) | 191 |
| TaaI | ACNGT | 1 cut(s) | 97 |
| TaiI | ACGT | 1 cut(s) | 85 |
| Tru1I | TTAA | 1 cut(s) | 56 |
| Tru9I | TTAA | 1 cut(s) | 56 |
| TseI | GCWGC | 1 cut(s) | 182 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| TspGWI | ACGGA | 1 cut(s) | 192 |
| Vha464I | CTTAAG | 1 cut(s) | 55 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 146 |
| XmaJI | CCTAGG | 1 cut(s) | 191 |
| XspI | CTAG | 2 cut(s) | 42, 192 |