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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD08G1226200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0113201 |
| rosa_laevigata | RLG00000013598 RLG00000032863 |
| rosa_roxburghii | Rroxscaffold_7G00200920 |
| rosa_rugosa | Rorug01G0041600 Rorug01G0041700 Rorug01G0041800 Rorug01G0041900 Rorug03G0217700 |
| rosa_samantha | Rh1BG050100 Rh2AG240400 Rh2CG244500 Rh2DG248400 Rh4AG281100 Rh4BG286600 Rh4BG286700 Rh4DG283700 Rh5DG504300 |
| rosa_wichuraiana | Rw0G013010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 347 |
| AccIII | TCCGGA | 1 cut(s) | 430 |
| AclWI | GGATC | 1 cut(s) | 253 |
| AfaI | GTAC | 1 cut(s) | 33 |
| AgsI | TTSAA | 4 cut(s) | 79, 204, 365, 443 |
| AluBI | AGCT | 1 cut(s) | 176 |
| AluI | AGCT | 1 cut(s) | 176 |
| AlwI | GGATC | 1 cut(s) | 253 |
| Ama87I | CYCGRG | 1 cut(s) | 134 |
| Aor13HI | TCCGGA | 1 cut(s) | 430 |
| AseI | ATTAAT | 1 cut(s) | 411 |
| AsuII | TTCGAA | 1 cut(s) | 267 |
| AvaI | CYCGRG | 1 cut(s) | 134 |
| AxyI | CCTNAGG | 1 cut(s) | 389 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 15, 47 |
| BccI | CCATC | 1 cut(s) | 177 |
| BfaI | CTAG | 1 cut(s) | 198 |
| BglII | AGATCT | 1 cut(s) | 130 |
| BmcAI | AGTACT | 1 cut(s) | 33 |
| BmeT110I | CYCGRG | 1 cut(s) | 134 |
| BmsI | GCATC | 1 cut(s) | 167 |
| BpmI | CTGGAG | 1 cut(s) | 132 |
| Bpu14I | TTCGAA | 1 cut(s) | 267 |
| BsaJI | CCNNGG | 1 cut(s) | 180 |
| BsaWI | WCCGGW | 1 cut(s) | 430 |
| Bse1I | ACTGG | 2 cut(s) | 29, 287 |
| Bse21I | CCTNAGG | 1 cut(s) | 389 |
| BseAI | TCCGGA | 1 cut(s) | 430 |
| BseDI | CCNNGG | 1 cut(s) | 180 |
| BseNI | ACTGG | 2 cut(s) | 29, 287 |
| BsiHKCI | CYCGRG | 1 cut(s) | 134 |
| BsiSI | CCGG | 1 cut(s) | 431 |
| BsmI | GAATGC | 1 cut(s) | 106 |
| BsoBI | CYCGRG | 1 cut(s) | 134 |
| Bsp119I | TTCGAA | 1 cut(s) | 267 |
| Bsp13I | TCCGGA | 1 cut(s) | 430 |
| Bsp143I | GATC | 3 cut(s) | 130, 238, 245 |
| BspEI | TCCGGA | 1 cut(s) | 430 |
| BspPI | GGATC | 1 cut(s) | 253 |
| BspT104I | TTCGAA | 1 cut(s) | 267 |
| BsrI | ACTGG | 2 cut(s) | 29, 287 |
| BssECI | CCNNGG | 1 cut(s) | 180 |
| BssMI | GATC | 3 cut(s) | 130, 238, 245 |
| BssT1I | CCWWGG | 1 cut(s) | 180 |
| Bst6I | CTCTTC | 1 cut(s) | 366 |
| BstBI | TTCGAA | 1 cut(s) | 267 |
| BstDEI | CTNAG | 1 cut(s) | 389 |
| BstKTI | GATC | 3 cut(s) | 133, 241, 248 |
| BstMBI | GATC | 3 cut(s) | 130, 238, 245 |
| BstX2I | RGATCY | 1 cut(s) | 130 |
| BstYI | RGATCY | 1 cut(s) | 130 |
| Bsu36I | CCTNAGG | 1 cut(s) | 389 |
| Csp6I | GTAC | 1 cut(s) | 32 |
| CviAII | CATG | 2 cut(s) | 98, 369 |
| CviJI | RGCY | 2 cut(s) | 176, 315 |
| CviKI_1 | RGCY | 2 cut(s) | 176, 315 |
| CviQI | GTAC | 1 cut(s) | 32 |
| DdeI | CTNAG | 1 cut(s) | 389 |
| DpnI | GATC | 3 cut(s) | 132, 240, 247 |
| DpnII | GATC | 3 cut(s) | 130, 238, 245 |
| Eam1104I | CTCTTC | 1 cut(s) | 366 |
| EarI | CTCTTC | 1 cut(s) | 366 |
| Eco130I | CCWWGG | 1 cut(s) | 180 |
| Eco32I | GATATC | 1 cut(s) | 193 |
| Eco81I | CCTNAGG | 1 cut(s) | 389 |
| Eco88I | CYCGRG | 1 cut(s) | 134 |
| EcoRV | GATATC | 1 cut(s) | 193 |
| EcoT14I | CCWWGG | 1 cut(s) | 180 |
| ErhI | CCWWGG | 1 cut(s) | 180 |
| FaeI | CATG | 2 cut(s) | 101, 372 |
| FaiI | YATR | 6 cut(s) | 65, 84, 99, 163, 321, 370 |
| FatI | CATG | 2 cut(s) | 97, 368 |
| FblI | GTMKAC | 1 cut(s) | 347 |
| FspBI | CTAG | 1 cut(s) | 198 |
| GsuI | CTGGAG | 1 cut(s) | 132 |
| HapII | CCGG | 1 cut(s) | 431 |
| Hin1II | CATG | 2 cut(s) | 101, 372 |
| HindIII | AAGCTT | 1 cut(s) | 174 |
| HinfI | GANTC | 2 cut(s) | 353, 397 |
| HpaII | CCGG | 1 cut(s) | 431 |
| Hpy166II | GTNNAC | 1 cut(s) | 348 |
| Hpy188I | TCNGA | 3 cut(s) | 42, 190, 402 |
| Hpy188III | TCNNGA | 3 cut(s) | 92, 149, 431 |
| Hpy8I | GTNNAC | 1 cut(s) | 348 |
| HpyAV | CCTTC | 3 cut(s) | 37, 288, 437 |
| HpyCH4V | TGCA | 2 cut(s) | 221, 334 |
| HpyF3I | CTNAG | 1 cut(s) | 389 |
| Hsp92II | CATG | 2 cut(s) | 101, 372 |
| Kpn2I | TCCGGA | 1 cut(s) | 430 |
| Kzo9I | GATC | 3 cut(s) | 130, 238, 245 |
| LpnPI | CCDG | 4 cut(s) | 42, 162, 300, 444 |
| LweI | GCATC | 1 cut(s) | 167 |
| MaeI | CTAG | 1 cut(s) | 198 |
| MaeIII | GTNAC | 1 cut(s) | 10 |
| MalI | GATC | 3 cut(s) | 132, 240, 247 |
| MboI | GATC | 3 cut(s) | 130, 238, 245 |
| MboII | GAAGA | 2 cut(s) | 348, 353 |
| MfeI | CAATTG | 1 cut(s) | 338 |
| MflI | RGATCY | 1 cut(s) | 130 |
| MluCI | AATT | 5 cut(s) | 291, 338, 412, 426, 448 |
| MnlI | CCTC | 1 cut(s) | 284 |
| MroI | TCCGGA | 1 cut(s) | 430 |
| MseI | TTAA | 3 cut(s) | 377, 411, 451 |
| MspI | CCGG | 1 cut(s) | 431 |
| MunI | CAATTG | 1 cut(s) | 338 |
| Mva1269I | GAATGC | 1 cut(s) | 106 |
| NdeII | GATC | 3 cut(s) | 130, 238, 245 |
| NlaIII | CATG | 2 cut(s) | 101, 372 |
| NmeAIII | GCCGAG | 1 cut(s) | 152 |
| NmuCI | GTSAC | 1 cut(s) | 10 |
| NspV | TTCGAA | 1 cut(s) | 267 |
| PctI | GAATGC | 1 cut(s) | 106 |
| PfeI | GAWTC | 2 cut(s) | 353, 397 |
| PshBI | ATTAAT | 1 cut(s) | 411 |
| PsuI | RGATCY | 1 cut(s) | 130 |
| RsaI | GTAC | 1 cut(s) | 33 |
| RsaNI | GTAC | 1 cut(s) | 32 |
| SaqAI | TTAA | 3 cut(s) | 377, 411, 451 |
| Sau3AI | GATC | 3 cut(s) | 130, 238, 245 |
| ScaI | AGTACT | 1 cut(s) | 33 |
| SetI | ASST | 6 cut(s) | 48, 178, 234, 395, 409, 448 |
| SfaNI | GCATC | 1 cut(s) | 167 |
| SfuI | TTCGAA | 1 cut(s) | 267 |
| Sse9I | AATT | 5 cut(s) | 291, 338, 412, 426, 448 |
| SspMI | CTAG | 1 cut(s) | 198 |
| StyI | CCWWGG | 1 cut(s) | 180 |
| TaqI | TCGA | 3 cut(s) | 267, 281, 395 |
| TasI | AATT | 5 cut(s) | 291, 338, 412, 426, 448 |
| TatI | WGTACW | 1 cut(s) | 31 |
| TfiI | GAWTC | 2 cut(s) | 353, 397 |
| Tru1I | TTAA | 3 cut(s) | 377, 411, 451 |
| Tru9I | TTAA | 3 cut(s) | 377, 411, 451 |
| TseFI | GTSAC | 1 cut(s) | 10 |
| Tsp45I | GTSAC | 1 cut(s) | 10 |
| TspDTI | ATGAA | 1 cut(s) | 63 |
| VspI | ATTAAT | 1 cut(s) | 411 |
| XmiI | GTMKAC | 1 cut(s) | 347 |
| XspI | CTAG | 1 cut(s) | 198 |
| ZrmI | AGTACT | 1 cut(s) | 33 |