Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002648

Physical Location & Seq

Genomic Coordinates Reverse (-)

29437272 .. 29441619

Gene Structure 4348 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0209000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2979 bp

ATGGCTGAAGGTGTTGTTACAGTAGTGGCTGAAGGGATCAAGCCACTGGGAGAGTTCATCATTCAGCAAGCGAAAATCTTGAGTGGAGTCAGCTATCAAATTGAGCTTGCGCAGATTGAGCTACATTTGATCCGGGGATTTCTAAAAGACGCAGATACGAGGCAACAAGATGAAGAACTAGTACGCATTTGTGTTAAACTTATCAGAGATGCTGCTTATGATTTGGAGGATGTCATTGAATCTTTTGCCTTGAAAGTGGCTTCCAGGAGGAGAGGAGGTACTGTGAAGATTGTTCTCAAAAGGTTTGCCTGCATCTTTAACGAAGGACTTAATCGATACAAGATTGGGTCCGAAATTGAGGATATTATGACCAAACTTTCTCATCTGAGGTCAAGTTTGCAAAGTTATAACATCAGGCAAATAAGTGGGGCTGATGGTGTCGCTTCTTCTTTTAAGAGGCAACGAGACCGAAGGCTAACTTATCCTCATCAAGTTGAAAATCACATTGTTGGGTTGGAGGAAAGCACGGAAAGACTGGTGAAAGAGTTGGTAGGAGAAGGAAACCGTCACCCTGTTGTTTCTATTTGGGGGATGGGCGGCTCCGGAAAAACCACTCTTGCAAAACAGGTTTTTCTTCAAAATGAAGTTAAGCGTCATTTTGATTGTTTTGCTTGGGTCTGTATATCTCAACAATGGGAAGGAAAGGATGTATTGGAAGATATTTTAATTCAACTCACACCAGATAAAAGGAAAGAAATTTCCAAAAAGGGAATGATTGAAATAGCAAGGGAGGTCTATAGTATCCAACGAGAACAGAGATGTCTGGTGGTCCTTGATGACATATGGACTCAAGGGGCTTGGCATTCGATAAAAGCTGGATTCCCAATCAATGAGGAAACAGAGAGCCGGATATTACTCACTACTCGCAAGAAAGAAGTTGCCGTGCTTGCATCCGGAAGTGATCATCTCCATCAACCTCAACAATTAAATGACAAACAAATCTGGGAACTGTTTGAAAAGATAGCCATATGTGGAAGCGACAAACCAGACAGACTTCCAAATGAAGACCGGGAAGATTATGAAAAGAGGAGAGGGAAGATCTTGGAAGTTTATGAAAAGAAGAGAGAATTAGGAAAGAAGATGCTTGTACATTGTTCAGGTTTGCCATTAGCCATCAGTGTGCTTGCTGGTCTTCTAAGTAGACGAGAGAAAGTTGAGGAATGGGAAACAGTACTTAGAAATGTTGATCATTACATAATGAGAGGCGCAAATGTCCTTGAAAGAGAAAACACAAGTGAAGAGTATGGTGTATCGAGTGTCTTGGCATTGAGTTATGATGACTTACCATCTCACTTAAAACTCTGCTTTCTGTATTTAGCCCAATATCCTGAGGATCATGAGATACAGGTAACAAGATTGACTCAATTATGGATTGCAGAAGGGTTTATACCTTCAACATCAGAAATACATGGTTCAATTGAATTAATGGAAGATGTATCATATGGTTGCCTAACTGAACTGGTGCAAAGATCTATGGTTCAAGTTGGAAAATATGGTTTTAGTGGGAAGGTGAAAAGTTGCCGTCTCCATGATCTGATGCGGGACTTGTGCTTGCAAAAGGCAAAAGAGGAGAACTTTCTTGGTATTGTTAACTTTTCTGTGGGTCCGGTATCTTATGCAACACTGATTGGTAAGGTTCGAAGACTTGCCCTCTATTTGGACAAAAATAAATATGAGTTCAGTAGTGAGAATGGCCACATTAGGTCTCTATTATACTTTGCCCCAGAACGGTTCTACCCAAAGTGGAACAAAAGAATAATACGATCAGTATTCAATGACTTCAATTTGATTAGAGTCTTGAAGTTTGAAAATATAGGTAGGGAGTTTGAGTTACCAAAGACGATTGGGAATCTAGTCCACCTGAGGTTTCTGAGTCTGAAGGATAGTGCATTTCGTGCGTTGCCGTCATCTATATCTAATCTGGTACTTTTGCAAACTCTAGATCTGCGGGGTCATATTGTTGGAGGATATGAAACTTGTTTTGGGTTTGGGTGGTACAGCGTGACCAAAATCAGAAATGTGTTTCGGAATATGGAGCAACTGAGGCATTTGTATTTACCTAGTTGGTACATGAGAGTCTGTGGAAAGAAACTGTCATTTGCAAGGCTGTGCAATTTGCAGACGTTGGTCAATGTTAGAATTGAGAAGTGTGATTTGAATGGTCTTGTTCAATTAAGCAATCTGAAGAAACTAAGCATAAAGCGATCAGAGACTAGTGAGTTGGAAAAGCTGAAGGACATGTTGATATCAGGGAATAGAGCATATAAACATCTTCGGTCGCTATCTCTGCAGGCAGACCAATGTGGTGATATTGGGGATATACCAAGTGATATAATATTAAGGTGTCCTCATTTATACAAGCTGCGACTGGATGGGAGTATGACAGCGTTACCGAAAGAGCTCCCAAACCTCACCAAGTTAACGCTGATAAAAACAGGACTGAAGGGTGACCAGATTGAAATACTGGAGAAGCTGTCCAACTTAAGGGTGCTTTACCTTGGTTGGCTTTCTTTTGAATCAAAAACAATGGTTTTCTCCCAAGGAGGCTTTCCTCATCTGGAGTTTCTTACCCTTCATTACTTGCGTGATTTGAATGAGTGGAGGGTGGAGAAAGAAGCCATGCCTAGTCTTCAGAGATTGCGCATTGATTGGTGCGAACGATTGCGGGCAGTTCCAGATGGGCTTCAGGAGATTACTACCCTCAAGGAATTAACAATCAAAGACATGCCCAGTAGATTCCGCAGTAGGGTTGGGGAAGGAGGAGAGGATTTCTACAAAATCAAACATGTGCCTTCTCTTATAATCACAAATCTCTACGACTCCAAGAAGCCAGAAATGGAGGAAGCTGCAGGTGCGTCCCAAGTAGATACGGGTCCAGTCGGTGACTCTCATCAGGAATTAACTGTGGATGGTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0019538 GO:0022625 GO:0022626 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L22e

Protein Analysis

992

Amino Acids

113.68

Weight (kDa)

8.48

Isoelectric Point (pI)

47.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	13 - 91	9.8e-18	Rx N-terminal domain
NB-ARC	PF00931	173 - 343	2.9e-41	NB-ARC domain
WHD_DRP	PF23559	462 - 537	1.3e-18	Disease resistance protein Winged helix domain
LRR_14	PF23598	610 - 926	4.2e-33	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002648)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05560 AT3G05560 AT3G05560 AT5G27770
fragaria_vesca	FvH4_2g25750 FvH4_7g11630
malus_domestica	MD02G1205500.v1.1 MD03G1288500.v1.1 MD07G1121900.v1.1 MD11G1309600.v1.1
prunus_persica	Prupe.2G144300_v2.0.a1 Prupe.8G261700_v2.0.a1
pyrus_communis	pycom02g16730 pycom07g10430
rosa_chinensis	RchiOBHm_Chr1g0350181 RchiOBHm_Chr6g0294041
rosa_laevigata	RLG00000011904 RLG00000028500
rosa_multiflora	Rmu_co8031908.1_g000001 Rmu_sc0010426.1_g000003 Rmu_sc0030988.1_g000003
rosa_roxburghii	Rroxscaffold_4G00305030 Rroxscaffold_7G00173700
rosa_rugosa	Rorug01G0209000 Rorug01G0209100 Rorug01G0209200 Rorug06G0240500 Rorug06G0240500
rosa_samantha	Rh1AG224900 Rh1BG192800 Rh1CG209700 Rh1DG221200 Rh6AG353400 Rh6BG360300 Rh6CG367500 Rh6DG354200
rosa_wichuraiana	Rw1G013180 Rw1G019230 Rw1G019330 Rw6G030790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	408, 2861
AarI	CACCTGC	1 cut(s)	2900
Acc16I	TGCGCA	2 cut(s)	111, 2702
Acc36I	ACCTGC	1 cut(s)	2900
AccI	GTMKAC	1 cut(s)	1201
AccIII	TCCGGA	2 cut(s)	602, 953
AciI	CCGC	5 cut(s)	597, 1600, 2008, 2725, 2800
AclWI	GGATC	3 cut(s)	44, 124, 1401
AcoI	YGGCCR	1 cut(s)	1753
AcsI	RAATTY	1 cut(s)	756
AcuI	CTGAAG	8 cut(s)	27, 51, 1958, 2264, 2312, 2522, 2675, 2729
AfaI	GTAC	7 cut(s)	183, 280, 1149, 1233, 1986, 2057, 2129
AfiI	CCNNNNNNNGG	4 cut(s)	1717, 1788, 2544, 2806
AflII	CTTAAG	1 cut(s)	2542
AflIII	ACRYGT	2 cut(s)	2298, 2845
AhlI	ACTAGT	2 cut(s)	178, 2273
AjnI	CCWGG	1 cut(s)	263
AjuI	GAANNNNNNNTTGG	4 cut(s)	2025, 2057, 2592, 2624
AluBI	AGCT	9 cut(s)	93, 106, 121, 875, 2290, 2422, 2461, 2533, 2906
AluI	AGCT	9 cut(s)	93, 106, 121, 875, 2290, 2422, 2461, 2533, 2906
Alw21I	GWGCWC	1 cut(s)	2463
Alw26I	GTCTC	4 cut(s)	459, 1589, 1770, 2264
AlwI	GGATC	3 cut(s)	44, 124, 1401
Aor13HI	TCCGGA	2 cut(s)	602, 953
AoxI	GGCC	1 cut(s)	1753
ApeKI	GCWGC	3 cut(s)	212, 2422, 2906
ApoI	RAATTY	1 cut(s)	756
AseI	ATTAAT	1 cut(s)	1484
AspLEI	GCGC	3 cut(s)	112, 1268, 2703
AspS9I	GGNCC	4 cut(s)	348, 829, 1664, 2933
AsuC2I	CCSGG	2 cut(s)	134, 1070
AsuHPI	GGTGA	7 cut(s)	550, 560, 1582, 2378, 2464, 2519, 2954
AsuII	TTCGAA	1 cut(s)	1699
AvaII	GGWCC	4 cut(s)	348, 829, 1664, 2933
AxyI	CCTNAGG	2 cut(s)	1389, 1922
BalI	TGGCCA	1 cut(s)	1755
BanII	GRGCYC	1 cut(s)	2463
BarI	GAAGNNNNNNTAC	4 cut(s)	165, 197, 1431, 1463
BbsI	GAAGAC	4 cut(s)	1071, 1184, 1708, 2681
Bbv12I	GWGCWC	1 cut(s)	2463
BbvI	GCAGC	3 cut(s)	199, 2409, 2893
BccI	CCATC	8 cut(s)	428, 586, 978, 1181, 1354, 2426, 2732, 2963
BceAI	ACGGC	3 cut(s)	926, 1566, 1948
BciT130I	CCWGG	1 cut(s)	265
BciVI	GTATCC	1 cut(s)	812
BclI	TGATCA	2 cut(s)	961, 1246
BcnI	CCSGG	2 cut(s)	134, 1070
BcoDI	GTCTC	4 cut(s)	459, 1589, 1770, 2264
BcuI	ACTAGT	2 cut(s)	178, 2273
BfaI	CTAG	6 cut(s)	179, 1913, 2000, 2121, 2274, 2685
BfmI	CTRYAG	3 cut(s)	796, 2348, 2907
BfrI	CTTAAG	1 cut(s)	2542
BfuAI	ACCTGC	1 cut(s)	2900
BfuI	GTATCC	1 cut(s)	812
BglII	AGATCT	3 cut(s)	1098, 1529, 2002
BisI	GCNGC	4 cut(s)	213, 598, 2423, 2907
BlsI	GCNGC	4 cut(s)	214, 599, 2424, 2908
BmcAI	AGTACT	1 cut(s)	1233
Bme1390I	CCNGG	3 cut(s)	134, 265, 1070
Bme18I	GGWCC	4 cut(s)	348, 829, 1664, 2933
BmgT120I	GGNCC	4 cut(s)	348, 829, 1664, 2933
BmiI	GGNNCC	4 cut(s)	349, 601, 1665, 2934
BmrFI	CCNGG	3 cut(s)	134, 265, 1070
BmrI	ACTGGG	2 cut(s)	56, 2784
BmsI	GCATC	5 cut(s)	199, 321, 959, 1131, 1587
BmuI	ACTGGG	2 cut(s)	56, 2784
BoxI	GACNNNNGTC	1 cut(s)	2186
BpiI	GAAGAC	4 cut(s)	1071, 1184, 1708, 2681
BpmI	CTGGAG	2 cut(s)	2546, 2639
Bpu14I	TTCGAA	1 cut(s)	1699
BpuEI	CTTGAG	3 cut(s)	100, 834, 2747
BpuMI	CCSGG	2 cut(s)	134, 1070
Bsa29I	ATCGAT	1 cut(s)	334
BsaI	GGTCTC	2 cut(s)	459, 1770
BsaJI	CCNNGG	3 cut(s)	133, 2557, 2599
BsaWI	WCCGGW	3 cut(s)	602, 953, 1666
BsaXI	ACNNNNNCTCC	8 cut(s)	262, 267, 292, 297, 1874, 1904, 2519, 2549
Bsc4I	CCNNNNNNNGG	4 cut(s)	1717, 1788, 2544, 2806
Bse1I	ACTGG	7 cut(s)	51, 540, 1524, 2433, 2529, 2790, 2936
Bse21I	CCTNAGG	2 cut(s)	1389, 1922
BseAI	TCCGGA	2 cut(s)	602, 953
BseBI	CCWGG	1 cut(s)	265
BseCI	ATCGAT	1 cut(s)	334
BseDI	CCNNGG	3 cut(s)	133, 2557, 2599
BseGI	GGATG	6 cut(s)	235, 597, 712, 950, 2437, 2974
BseLI	CCNNNNNNNGG	4 cut(s)	1717, 1788, 2544, 2806
BseMII	CTCAG	5 cut(s)	377, 1380, 1913, 1922, 2093
BseNI	ACTGG	7 cut(s)	51, 540, 1524, 2433, 2529, 2790, 2936
BseRI	GAGGAG	5 cut(s)	283, 288, 1102, 1643, 2835
BseXI	GCAGC	3 cut(s)	199, 2409, 2893
Bsh1285I	CGRYCG	1 cut(s)	2339
BshFI	GGCC	1 cut(s)	1755
BshVI	ATCGAT	1 cut(s)	334
BsiEI	CGRYCG	1 cut(s)	2339
BsiHKAI	GWGCWC	1 cut(s)	2463
BsiSI	CCGG	6 cut(s)	133, 603, 907, 954, 1069, 1667
BslFI	GGGAC	2 cut(s)	1616, 2902
BslI	CCNNNNNNNGG	4 cut(s)	1717, 1788, 2544, 2806
BsmAI	GTCTC	4 cut(s)	459, 1589, 1770, 2264
BsmBI	CGTCTC	1 cut(s)	1589
BsmFI	GGGAC	2 cut(s)	1616, 2902
BsmI	GAATGC	1 cut(s)	862
BsnI	GGCC	1 cut(s)	1755
Bso31I	GGTCTC	2 cut(s)	459, 1770
Bsp119I	TTCGAA	1 cut(s)	1699
Bsp1286I	GDGCHC	1 cut(s)	2463
Bsp13I	TCCGGA	2 cut(s)	602, 953
Bsp1407I	TGTACA	1 cut(s)	1147
BspACI	CCGC	5 cut(s)	597, 1600, 2008, 2725, 2800
BspANI	GGCC	1 cut(s)	1755
BspCNI	CTCAG	5 cut(s)	378, 1381, 1914, 1923, 2094
BspDI	ATCGAT	1 cut(s)	334
BspEI	TCCGGA	2 cut(s)	602, 953
BspHI	TCATGA	1 cut(s)	1396
BspLI	GGNNCC	4 cut(s)	349, 601, 1665, 2934
BspMAI	CTGCAG	2 cut(s)	2352, 2911
BspMI	ACCTGC	1 cut(s)	2900
BspPI	GGATC	3 cut(s)	44, 124, 1401
BspT104I	TTCGAA	1 cut(s)	1699
BspTI	CTTAAG	1 cut(s)	2542
BspTNI	GGTCTC	2 cut(s)	459, 1770
BsrGI	TGTACA	1 cut(s)	1147
BsrI	ACTGG	7 cut(s)	51, 540, 1524, 2433, 2529, 2790, 2936
BssECI	CCNNGG	3 cut(s)	133, 2557, 2599
BssT1I	CCWWGG	2 cut(s)	2557, 2599
Bst2UI	CCWGG	1 cut(s)	265
Bst4CI	ACNGT	8 cut(s)	22, 283, 566, 1011, 1231, 1791, 2154, 2965
Bst6I	CTCTTC	2 cut(s)	1115, 1293
BstAFI	CTTAAG	1 cut(s)	2542
BstAPI	GCANNNNNTGC	1 cut(s)	1955
BstAUI	TGTACA	1 cut(s)	1147
BstBI	TTCGAA	1 cut(s)	1699
BstC8I	GCNNGC	8 cut(s)	69, 108, 310, 948, 1185, 1613, 2352, 2727
BstDEI	CTNAG	8 cut(s)	386, 1196, 1235, 1389, 1922, 1931, 2102, 2252
BstEII	GGTNACC	1 cut(s)	2507
BstF5I	GGATG	6 cut(s)	235, 597, 712, 950, 2437, 2974
BstHHI	GCGC	3 cut(s)	112, 1268, 2703
BstMAI	GTCTC	4 cut(s)	459, 1589, 1770, 2264
BstMCI	CGRYCG	1 cut(s)	2339
BstMWI	GCNNNNNNNGC	6 cut(s)	118, 947, 1955, 2104, 2347, 2912
BstNI	CCWGG	1 cut(s)	265
BstNSI	RCATGY	3 cut(s)	2302, 2788, 2849
BstPAI	GACNNNNGTC	1 cut(s)	2186
BstPI	GGTNACC	1 cut(s)	2507
BstSCI	CCNGG	3 cut(s)	132, 263, 1068
BstSFI	CTRYAG	3 cut(s)	796, 2348, 2907
BstV1I	GCAGC	3 cut(s)	199, 2409, 2893
BstV2I	GAAGAC	4 cut(s)	1071, 1184, 1708, 2681
BstX2I	RGATCY	3 cut(s)	1098, 1529, 2002
BstYI	RGATCY	3 cut(s)	1098, 1529, 2002
Bsu15I	ATCGAT	1 cut(s)	334
Bsu36I	CCTNAGG	2 cut(s)	1389, 1922
BsuI	GTATCC	1 cut(s)	812
BsuRI	GGCC	1 cut(s)	1755
BsuTUI	ATCGAT	1 cut(s)	334
BtsCI	GGATG	6 cut(s)	235, 597, 712, 950, 2437, 2974
BtsIMutI	CAGTG	3 cut(s)	44, 1183, 1682
BveI	ACCTGC	1 cut(s)	2900
Cac8I	GCNNGC	8 cut(s)	69, 108, 310, 948, 1185, 1613, 2352, 2727
CciI	TCATGA	1 cut(s)	1396
CfoI	GCGC	3 cut(s)	112, 1268, 2703
Cfr13I	GGNCC	4 cut(s)	348, 829, 1664, 2933
ClaI	ATCGAT	1 cut(s)	334
CseI	GACGC	3 cut(s)	158, 641, 2904
Csp6I	GTAC	7 cut(s)	182, 279, 1148, 1232, 1985, 2056, 2128
CviAII	CATG	8 cut(s)	1397, 1469, 1589, 2131, 2299, 2680, 2785, 2846
CviQI	GTAC	7 cut(s)	182, 279, 1148, 1232, 1985, 2056, 2128
DdeI	CTNAG	8 cut(s)	386, 1196, 1235, 1389, 1922, 1931, 2102, 2252
EaeI	YGGCCR	1 cut(s)	1753
Eam1104I	CTCTTC	2 cut(s)	1115, 1293
EarI	CTCTTC	2 cut(s)	1115, 1293
Ecl136II	GAGCTC	1 cut(s)	2461
Eco130I	CCWWGG	2 cut(s)	2557, 2599
Eco24I	GRGCYC	1 cut(s)	2463
Eco31I	GGTCTC	2 cut(s)	459, 1770
Eco32I	GATATC	1 cut(s)	2307
Eco47I	GGWCC	4 cut(s)	348, 829, 1664, 2933
Eco53kI	GAGCTC	1 cut(s)	2461
Eco57I	CTGAAG	8 cut(s)	27, 51, 1958, 2264, 2312, 2522, 2675, 2729
Eco81I	CCTNAGG	2 cut(s)	1389, 1922
Eco91I	GGTNACC	1 cut(s)	2507
EcoICRI	GAGCTC	1 cut(s)	2461
EcoO65I	GGTNACC	1 cut(s)	2507
EcoRII	CCWGG	1 cut(s)	263
EcoRV	GATATC	1 cut(s)	2307
EcoT14I	CCWWGG	2 cut(s)	2557, 2599
EcoT38I	GRGCYC	1 cut(s)	2463
ErhI	CCWWGG	2 cut(s)	2557, 2599
Esp3I	CGTCTC	1 cut(s)	1589
FaeI	CATG	8 cut(s)	1400, 1472, 1592, 2134, 2302, 2683, 2788, 2849
FalI	AAGNNNNNCTT	2 cut(s)	463, 495
FaqI	GGGAC	2 cut(s)	1616, 2902
FatI	CATG	8 cut(s)	1396, 1468, 1588, 2130, 2298, 2679, 2784, 2845
FauI	CCCGC	3 cut(s)	1593, 2001, 2718
FauNDI	CATATG	3 cut(s)	842, 1028, 1501
FbaI	TGATCA	2 cut(s)	961, 1246
FblI	GTMKAC	1 cut(s)	1201
Fnu4HI	GCNGC	4 cut(s)	213, 598, 2423, 2907
FokI	GGATG	5 cut(s)	242, 604, 719, 937, 2444
FriOI	GRGCYC	1 cut(s)	2463
Fsp4HI	GCNGC	4 cut(s)	213, 598, 2423, 2907
FspBI	CTAG	6 cut(s)	179, 1913, 2000, 2121, 2274, 2685
FspI	TGCGCA	2 cut(s)	111, 2702
GlaI	GCGC	3 cut(s)	111, 1267, 2702
GluI	GCNGC	4 cut(s)	213, 598, 2423, 2907
GsuI	CTGGAG	2 cut(s)	2546, 2639
HaeIII	GGCC	1 cut(s)	1755
HapII	CCGG	6 cut(s)	133, 603, 907, 954, 1069, 1667
HgaI	GACGC	3 cut(s)	158, 641, 2904
HhaI	GCGC	3 cut(s)	112, 1268, 2703
Hin1II	CATG	8 cut(s)	1400, 1472, 1592, 2134, 2302, 2683, 2788, 2849
Hin6I	GCGC	3 cut(s)	110, 1266, 2701
HinP1I	GCGC	3 cut(s)	110, 1266, 2701
HincII	GTYRAC	2 cut(s)	1651, 2481
HindII	GTYRAC	2 cut(s)	1651, 2481
HpaI	GTTAAC	2 cut(s)	1651, 2481
HpaII	CCGG	6 cut(s)	133, 603, 907, 954, 1069, 1667
HphI	GGTGA	7 cut(s)	550, 560, 1582, 2378, 2464, 2519, 2954
Hpy166II	GTNNAC	4 cut(s)	1202, 1651, 1918, 2481
Hpy8I	GTNNAC	4 cut(s)	1202, 1651, 1918, 2481
HpyCH4III	ACNGT	8 cut(s)	22, 283, 566, 1011, 1231, 1791, 2154, 2965
HpyCH4IV	ACGT	1 cut(s)	2183
HpyF10VI	GCNNNNNNNGC	6 cut(s)	118, 947, 1955, 2104, 2347, 2912
HpyF3I	CTNAG	8 cut(s)	386, 1196, 1235, 1389, 1922, 1931, 2102, 2252
HpySE526I	ACGT	1 cut(s)	2183
Hsp92II	CATG	8 cut(s)	1400, 1472, 1592, 2134, 2302, 2683, 2788, 2849
HspAI	GCGC	3 cut(s)	110, 1266, 2701
Kpn2I	TCCGGA	2 cut(s)	602, 953
Ksp22I	TGATCA	2 cut(s)	961, 1246
KspAI	GTTAAC	2 cut(s)	1651, 2481
LmnI	GCTCC	3 cut(s)	605, 2095, 2466
Lsp1109I	GCAGC	3 cut(s)	199, 2409, 2893
LweI	GCATC	5 cut(s)	199, 321, 959, 1131, 1587
MaeI	CTAG	6 cut(s)	179, 1913, 2000, 2121, 2274, 2685
MaeII	ACGT	1 cut(s)	2183
MaeIII	GTNAC	8 cut(s)	16, 566, 1408, 1890, 2062, 2448, 2507, 2942
MfeI	CAATTG	1 cut(s)	1476
MflI	RGATCY	3 cut(s)	1098, 1529, 2002
MhlI	GDGCHC	1 cut(s)	2463
MlsI	TGGCCA	1 cut(s)	1755
MluNI	TGGCCA	1 cut(s)	1755
MlyI	GAGTC	8 cut(s)	96, 841, 1414, 1863, 1942, 2145, 2873, 2939
MmeI	TCCRAC	6 cut(s)	495, 829, 1525, 2002, 2262, 2562
Mox20I	TGGCCA	1 cut(s)	1755
MroI	TCCGGA	2 cut(s)	602, 953
MscI	TGGCCA	1 cut(s)	1755
MslI	CAYNNNNRTG	1 cut(s)	1178
Msp20I	TGGCCA	1 cut(s)	1755
MspCI	CTTAAG	1 cut(s)	2542
MspI	CCGG	6 cut(s)	133, 603, 907, 954, 1069, 1667
MspR9I	CCNGG	3 cut(s)	134, 265, 1070
MunI	CAATTG	1 cut(s)	1476
Mva1269I	GAATGC	1 cut(s)	862
MvaI	CCWGG	1 cut(s)	265
MwoI	GCNNNNNNNGC	6 cut(s)	118, 947, 1955, 2104, 2347, 2912
NciI	CCSGG	2 cut(s)	134, 1070
NdeI	CATATG	3 cut(s)	842, 1028, 1501
NlaIII	CATG	8 cut(s)	1400, 1472, 1592, 2134, 2302, 2683, 2788, 2849
NlaIV	GGNNCC	4 cut(s)	349, 601, 1665, 2934
NmuCI	GTSAC	4 cut(s)	566, 2062, 2507, 2942
NsbI	TGCGCA	2 cut(s)	111, 2702
NspI	RCATGY	3 cut(s)	2302, 2788, 2849
NspV	TTCGAA	1 cut(s)	1699
PagI	TCATGA	1 cut(s)	1396
PaqCI	CACCTGC	1 cut(s)	2900
PciI	ACATGT	2 cut(s)	2298, 2845
PctI	GAATGC	1 cut(s)	862
PfeI	GAWTC	5 cut(s)	239, 879, 1909, 2576, 2796
PfoI	TCCNGGA	1 cut(s)	263
PkrI	GCNGC	4 cut(s)	214, 599, 2424, 2908
PleI	GAGTC	8 cut(s)	95, 841, 1414, 1862, 1941, 2144, 2873, 2939
PpsI	GAGTC	8 cut(s)	95, 841, 1414, 1862, 1941, 2144, 2873, 2939
PscI	ACATGT	2 cut(s)	2298, 2845
PshAI	GACNNNNGTC	1 cut(s)	2186
PshBI	ATTAAT	1 cut(s)	1484
PsiI	TTATAA	2 cut(s)	408, 2861
Psp124BI	GAGCTC	1 cut(s)	2463
Psp6I	CCWGG	1 cut(s)	263
PspEI	GGTNACC	1 cut(s)	2507
PspGI	CCWGG	1 cut(s)	263
PspN4I	GGNNCC	4 cut(s)	349, 601, 1665, 2934
PspPI	GGNCC	4 cut(s)	348, 829, 1664, 2933
PstI	CTGCAG	2 cut(s)	2352, 2911
PsuI	RGATCY	3 cut(s)	1098, 1529, 2002
RsaI	GTAC	7 cut(s)	183, 280, 1149, 1233, 1986, 2057, 2129
RsaNI	GTAC	7 cut(s)	182, 279, 1148, 1232, 1985, 2056, 2128
RseI	CAYNNNNRTG	1 cut(s)	1178
SacI	GAGCTC	1 cut(s)	2463
SatI	GCNGC	4 cut(s)	213, 598, 2423, 2907
Sau96I	GGNCC	4 cut(s)	348, 829, 1664, 2933
ScaI	AGTACT	1 cut(s)	1233
SchI	GAGTC	8 cut(s)	96, 841, 1414, 1863, 1942, 2145, 2873, 2939
ScrFI	CCNGG	3 cut(s)	134, 265, 1070
SduI	GDGCHC	1 cut(s)	2463
SfaNI	GCATC	5 cut(s)	199, 321, 959, 1131, 1587
SfcI	CTRYAG	3 cut(s)	796, 2348, 2907
SfuI	TTCGAA	1 cut(s)	1699
SinI	GGWCC	4 cut(s)	348, 829, 1664, 2933
SmiMI	CAYNNNNRTG	1 cut(s)	1178
SmlI	CTYRAG	4 cut(s)	79, 849, 2542, 2762
SmoI	CTYRAG	4 cut(s)	79, 849, 2542, 2762
SpeI	ACTAGT	2 cut(s)	178, 2273
SsiI	CCGC	5 cut(s)	597, 1600, 2008, 2725, 2800
SspI	AATATT	1 cut(s)	2397
SspMI	CTAG	6 cut(s)	179, 1913, 2000, 2121, 2274, 2685
SstI	GAGCTC	1 cut(s)	2463
StyD4I	CCNGG	3 cut(s)	132, 263, 1068
StyI	CCWWGG	2 cut(s)	2557, 2599
TaaI	ACNGT	8 cut(s)	22, 283, 566, 1011, 1231, 1791, 2154, 2965
TaiI	ACGT	1 cut(s)	2186
TaqI	TCGA	4 cut(s)	334, 866, 1313, 1699
TaqII	GACCGA	2 cut(s)	483, 2325
TatI	WGTACW	2 cut(s)	1147, 1231
TauI	GCSGC	1 cut(s)	600
TfiI	GAWTC	5 cut(s)	239, 879, 1909, 2576, 2796
TscAI	CASTG	3 cut(s)	51, 1183, 1689
TseFI	GTSAC	4 cut(s)	566, 2062, 2507, 2942
TseI	GCWGC	3 cut(s)	212, 2422, 2906
Tsp45I	GTSAC	4 cut(s)	566, 2062, 2507, 2942
TspDTI	ATGAA	8 cut(s)	46, 186, 657, 1077, 1095, 1128, 2046, 2624
TspGWI	ACGGA	1 cut(s)	542
TspRI	CASTG	3 cut(s)	51, 1183, 1689
Vha464I	CTTAAG	1 cut(s)	2542
VpaK11BI	GGWCC	4 cut(s)	348, 829, 1664, 2933
VspI	ATTAAT	1 cut(s)	1484
XapI	RAATTY	1 cut(s)	756
XbaI	TCTAGA	1 cut(s)	1999
XceI	RCATGY	3 cut(s)	2302, 2788, 2849
XmiI	GTMKAC	1 cut(s)	1201
XspI	CTAG	6 cut(s)	179, 1913, 2000, 2121, 2274, 2685
ZrmI	AGTACT	1 cut(s)	1233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.