Rorug02G0011100

Serine incorporator

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
975712 .. 979897
4186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0011100.1

Sequence Viewer

Length: 2121 bp
ATGGATGTGGGTAGGAGGAGATCAGATGCAGGAGTGCTCAGGACTGGGAACACTGTGGTTGCAGGGTCAGTGTGGGAGAACAGGATGAAGCTTGATGAAGTCAGAGGTGGGATTAAGGTCTTCAATGGTGATCAGGAGAATTCTGAAGAGAGCAGCAGTAATGGGGTTGCTGCAACAACAACAACTCCTAGCACAAGGTTGAAGAGAGGTCAATCTGTTGGTGGAGCAGTGAGCAATGGGAAGAGAAAGACTTGGAAATCTGATACAAGGGTTGAAGGTTTGGACAAGAGTGGGTCCAGAGGAAAATCTGAGTTGAAGAATTCTGATGAACAGTGCAAGGAGTTGAGTGTTTCTGTCGATGGGATCAAGAACAGCCCAACTCAGGTGAGGTCTGTGAGGAGACTTAGATCTGAGGGAAGCAAGGAGAGTCAAAATGCTGTTGCTTCTGATAAAGCTGAGAGGAGCCCGGTTGGGAGTAGGAAGCCAAGGACTGAATTGCTGAAAAGTGCTAGTGATTTGGGTAAGGAGGAGGGAATTGAGAAGAATTTGGGTCAGTTGAGGAAGGTGAAATCGGAGTCGATCAGGGGAAGTGATTCTTCTGGCAATGCAATTCAATTGGGGAAGGTGAAATCGGAATCGAATAAGGCCTCCCCAGATGAATTGGATAAGGGAGTTGACAAGTCTGTTGAGGTGATTGAGAAAATCCCAGTTGGGGAGGAGACCGGAGATGGTGGATCTGATGAGAATTGCAAGGAGTTTGGTGTGTGCAGAGAAATGGTGGTTCCAAGCAATGTGGATGTGGTCAAATCTGATCCAACAGAATTGGTGAATGATGTTGCTGATGATGAAGATGGTGATGAAGAAGAAGAAGAAGAAGAAGAATTGGAGGAAGAGGTGGATGAAGAAATTGAGGTTGAAGTTGAAAAGATGAGCCTTGATATTAAGGAAATCAATGCACCGGTACAAGAGAAAGCACCAGTTGAAGAAGAAGCACCAGTTGAAGAAAAAGCACCAGTTCAAGTGAGAGCACCGGTTCAAGAAAAAGCACCAGTTCAAGTGAGAGCACCAGTTCAAGAGAAAGTGAGAGCACCAGTGCAAGAGAAATTAAGCAAGGTTGTGAATGAAGTGAAGGTAGTGAATGAAGTTAAGAAGTTTCAATTATTTGACCGCAAATTAAGAAACCAAGAAGTGAAAAAGCTTCAACATGTTCATCAAAAGCCAGAAACGATCTCCGTTAATCTGAAAAAGCAATCTCCTGTTATGAAACGTGCAGAAGTCTACTCAAACGTCCCTAAACAAACATCATCTCCAAATGATCAGTACCATAGCTTCCCAGAAACACATAGCAGATTGCAAAGTTTAGCGGATTTAGTAATGTGGAAAGATGTATCAAGATCAGTTTTTATATTTGGGATTGGAACATTTGTGATACTATCATCCTCCTACATGAAGGATCTAAATATCAGCTTCATTTCTGTCATATCCTATATGAGCCTTGTTTATCTGGCTGTCATCTTCCTCTTCAGGTCCATCATCTTGAGGGGAGCTTATGAAATAGAAAATGCAAATTCTGTGGTGGGTGAAGAAGAAGCAATTTGGTTACTGAAACTGGTCCTGCCTTACTTGAATGAGTTCCTGCTAAAGTTTAAAGCTTTGTTTTCTGGTGACCCTGCCACCACAATTAAGTTGGCAGTGCTGCTCTTTGTTTTGGCCAGGTGTGGCAGCTCCATAACCATTTGGACAATGGCCAAAGTAGGCTTTTTCGGAGTTTTCACCATACCAAAAGTGTGCTCTTTGTATTCTACCCAGATAACAATCTTCGCTAAATTTTGGGTGCGACGGTTTCGGGATGCTTGGGACTCCTGCTCTCACAAGAAACCAGTGACCATTGCGATCTTTCTACTAGTATGGAACTTATCTTCAGTAGAGGCTCGAATTTGGGCAGCGTTCATTTTGGTGGTGGCGTTCCGATACTATCAGCAGAAGTTGGTGACGGAGGAGTGGGTGGAAGATGATGTAGCAGCAGTAGAAGAAGAAGAAGGAGCTGAAGAAACTTGGCAGGGAGGACAAAGAGCCACTCCAGTTGATATTCACATCACTAAACAAAAGAAAGGATTCTAA

Protein Analysis

706

Amino Acids

78.69

Weight (kDa)

5.45

Isoelectric Point (pI)

53.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Reticulon PF02453 455 - 608 3.5e-21 Reticulon
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1278
AciI CCGC 2 cut(s) 1168, 1364
AclWI GGATC 4 cut(s) 371, 742, 806, 1461
AcoI YGGCCR 2 cut(s) 1710, 1746
AcsI RAATTY 6 cut(s) 139, 319, 544, 1567, 1826, 1935
AcuI CTGAAG 4 cut(s) 165, 1507, 1905, 2067
AfaI GTAC 2 cut(s) 963, 1322
AfiI CCNNNNNNNGG 2 cut(s) 382, 712
AflIII ACRYGT 1 cut(s) 1204
AgeI ACCGGT 2 cut(s) 958, 1030
AhlI ACTAGT 1 cut(s) 1903
AjnI CCWGG 1 cut(s) 1712
AluBI AGCT 9 cut(s) 91, 455, 1198, 1329, 1467, 1547, 1652, 1725, 2045
AluI AGCT 9 cut(s) 91, 455, 1198, 1329, 1467, 1547, 1652, 1725, 2045
Alw21I GWGCWC 5 cut(s) 39, 1030, 1066, 1090, 1793
Alw26I GTCTC 2 cut(s) 394, 713
AlwI GGATC 4 cut(s) 371, 742, 806, 1461
AoxI GGCC 3 cut(s) 645, 1710, 1746
ApeKI GCWGC 6 cut(s) 153, 170, 1696, 1722, 1943, 2021
ApoI RAATTY 6 cut(s) 139, 319, 544, 1567, 1826, 1935
AsiGI ACCGGT 2 cut(s) 958, 1030
Asp700I GAANNNNTTC 3 cut(s) 592, 1631, 2114
AspS9I GGNCC 3 cut(s) 294, 1527, 1612
AsuC2I CCSGG 1 cut(s) 467
AvaII GGWCC 3 cut(s) 294, 1527, 1612
BaeI ACNNNNGTAYC 2 cut(s) 255, 288
BalI TGGCCA 2 cut(s) 1712, 1748
BanII GRGCYC 1 cut(s) 467
BarI GAAGNNNNNNTAC 2 cut(s) 1313, 1345
BbsI GAAGAC 1 cut(s) 112
Bbv12I GWGCWC 5 cut(s) 39, 1030, 1066, 1090, 1793
BbvI GCAGC 6 cut(s) 157, 165, 1683, 1734, 1955, 2033
BccI CCATC 4 cut(s) 353, 722, 845, 1538
BciT130I CCWGG 1 cut(s) 1714
BclI TGATCA 2 cut(s) 130, 1315
BcnI CCSGG 1 cut(s) 467
BcoDI GTCTC 2 cut(s) 394, 713
BcuI ACTAGT 1 cut(s) 1903
BfaI CTAG 3 cut(s) 189, 510, 1904
BglII AGATCT 1 cut(s) 407
BisI GCNGC 6 cut(s) 154, 171, 1697, 1723, 1944, 2022
BlsI GCNGC 6 cut(s) 155, 172, 1698, 1724, 1945, 2023
Bme1390I CCNGG 2 cut(s) 467, 1714
Bme18I GGWCC 3 cut(s) 294, 1527, 1612
BmgT120I GGNCC 3 cut(s) 294, 1527, 1612
BmiI GGNNCC 3 cut(s) 295, 464, 783
BmrFI CCNGG 2 cut(s) 467, 1714
BmrI ACTGGG 2 cut(s) 54, 701
BmsI GCATC 2 cut(s) 16, 1840
BmuI ACTGGG 2 cut(s) 54, 701
BpiI GAAGAC 1 cut(s) 112
BpmI CTGGAG 1 cut(s) 2064
Bpu10I CCTNAGC 1 cut(s) 38
BpuEI CTTGAG 1 cut(s) 1558
BpuMI CCSGG 1 cut(s) 467
BsaBI GATNNNNATC 1 cut(s) 1814
BsaI GGTCTC 1 cut(s) 713
BsaJI CCNNGG 1 cut(s) 485
BsaWI WCCGGW 3 cut(s) 722, 958, 1030
BsaXI ACNNNNNCTCC 4 cut(s) 169, 199, 1291, 1321
Bsc4I CCNNNNNNNGG 2 cut(s) 382, 712
Bse118I RCCGGY 2 cut(s) 958, 1030
Bse3DI GCAATG 4 cut(s) 241, 610, 796, 1887
Bse8I GATNNNNATC 1 cut(s) 1814
BseBI CCWGG 1 cut(s) 1714
BseDI CCNNGG 1 cut(s) 485
BseGI GGATG 6 cut(s) 10, 90, 802, 904, 1436, 1855
BseJI GATNNNNATC 1 cut(s) 1814
BseLI CCNNNNNNNGG 2 cut(s) 382, 712
BseMI GCAATG 4 cut(s) 241, 610, 796, 1887
BseMII CTCAG 5 cut(s) 52, 300, 395, 402, 447
BseRI GAGGAG 6 cut(s) 31, 412, 475, 542, 731, 2012
BseXI GCAGC 6 cut(s) 157, 165, 1683, 1734, 1955, 2033
BsgI GTGCAG 2 cut(s) 787, 1290
BshFI GGCC 3 cut(s) 647, 1712, 1748
BshTI ACCGGT 2 cut(s) 958, 1030
BsiHKAI GWGCWC 5 cut(s) 39, 1030, 1066, 1090, 1793
BsiSI CCGG 4 cut(s) 467, 723, 959, 1031
BslFI GGGAC 2 cut(s) 1274, 1871
BslI CCNNNNNNNGG 2 cut(s) 382, 712
BsmAI GTCTC 2 cut(s) 394, 713
BsmFI GGGAC 2 cut(s) 1274, 1871
BsnI GGCC 3 cut(s) 647, 1712, 1748
Bso31I GGTCTC 1 cut(s) 713
Bsp1286I GDGCHC 6 cut(s) 39, 467, 1030, 1066, 1090, 1793
BspACI CCGC 2 cut(s) 1168, 1364
BspANI GGCC 3 cut(s) 647, 1712, 1748
BspCNI CTCAG 5 cut(s) 51, 301, 394, 403, 448
BspLI GGNNCC 3 cut(s) 295, 464, 783
BspPI GGATC 4 cut(s) 371, 742, 806, 1461
BspTNI GGTCTC 1 cut(s) 713
BsrDI GCAATG 4 cut(s) 241, 610, 796, 1887
BsrFI RCCGGY 2 cut(s) 958, 1030
BssAI RCCGGY 2 cut(s) 958, 1030
BssECI CCNNGG 1 cut(s) 485
BssT1I CCWWGG 1 cut(s) 485
Bst2UI CCWGG 1 cut(s) 1714
Bst4CI ACNGT 3 cut(s) 55, 333, 1842
Bst6I CTCTTC 5 cut(s) 141, 197, 236, 885, 1526
BstDEI CTNAG 6 cut(s) 38, 309, 381, 404, 411, 456
BstEII GGTNACC 1 cut(s) 1664
BstF5I GGATG 6 cut(s) 10, 90, 802, 904, 1436, 1855
BstMAI GTCTC 2 cut(s) 394, 713
BstNI CCWGG 1 cut(s) 1714
BstNSI RCATGY 1 cut(s) 1208
BstPI GGTNACC 1 cut(s) 1664
BstSCI CCNGG 2 cut(s) 465, 1712
BstV1I GCAGC 6 cut(s) 157, 165, 1683, 1734, 1955, 2033
BstV2I GAAGAC 1 cut(s) 112
BstX2I RGATCY 3 cut(s) 407, 734, 1453
BstYI RGATCY 3 cut(s) 407, 734, 1453
BsuRI GGCC 3 cut(s) 647, 1712, 1748
BtsCI GGATG 6 cut(s) 10, 90, 802, 904, 1436, 1855
BtsI GCAGTG 2 cut(s) 234, 1698
BtsIMutI CAGTG 7 cut(s) 51, 75, 234, 338, 1098, 1698, 1887
Cfr10I RCCGGY 2 cut(s) 958, 1030
Cfr13I GGNCC 3 cut(s) 294, 1527, 1612
Csp6I GTAC 2 cut(s) 962, 1321
CspAI ACCGGT 2 cut(s) 958, 1030
CspCI CAANNNNNGTGG 6 cut(s) 774, 809, 1554, 1589, 2065, 2100
CviAII CATG 2 cut(s) 1205, 1447
CviQI GTAC 2 cut(s) 962, 1321
DdeI CTNAG 6 cut(s) 38, 309, 381, 404, 411, 456
DraI TTTAAA 1 cut(s) 1648
EaeI YGGCCR 2 cut(s) 1710, 1746
Eam1104I CTCTTC 5 cut(s) 141, 197, 236, 885, 1526
EarI CTCTTC 5 cut(s) 141, 197, 236, 885, 1526
Eco130I CCWWGG 1 cut(s) 485
Eco147I AGGCCT 1 cut(s) 647
Eco24I GRGCYC 1 cut(s) 467
Eco31I GGTCTC 1 cut(s) 713
Eco47I GGWCC 3 cut(s) 294, 1527, 1612
Eco57I CTGAAG 4 cut(s) 165, 1507, 1905, 2067
Eco91I GGTNACC 1 cut(s) 1664
EcoO65I GGTNACC 1 cut(s) 1664
EcoRI GAATTC 2 cut(s) 139, 319
EcoRII CCWGG 1 cut(s) 1712
EcoT14I CCWWGG 1 cut(s) 485
EcoT38I GRGCYC 1 cut(s) 467
ErhI CCWWGG 1 cut(s) 485
FaeI CATG 2 cut(s) 1208, 1450
FalI AAGNNNNNCTT 2 cut(s) 580, 612
FaqI GGGAC 2 cut(s) 1274, 1871
FatI CATG 2 cut(s) 1204, 1446
FbaI TGATCA 2 cut(s) 130, 1315
FblI GTMKAC 1 cut(s) 1278
Fnu4HI GCNGC 6 cut(s) 154, 171, 1697, 1723, 1944, 2022
FokI GGATG 6 cut(s) 17, 97, 809, 911, 1423, 1862
FriOI GRGCYC 1 cut(s) 467
Fsp4HI GCNGC 6 cut(s) 154, 171, 1697, 1723, 1944, 2022
FspBI CTAG 3 cut(s) 189, 510, 1904
GluI GCNGC 6 cut(s) 154, 171, 1697, 1723, 1944, 2022
GsuI CTGGAG 1 cut(s) 2064
HaeIII GGCC 3 cut(s) 647, 1712, 1748
HapII CCGG 4 cut(s) 467, 723, 959, 1031
Hin1II CATG 2 cut(s) 1208, 1450
HincII GTYRAC 1 cut(s) 676
HindII GTYRAC 1 cut(s) 676
HindIII AAGCTT 3 cut(s) 89, 1196, 1650
HinfI GANTC 6 cut(s) 427, 575, 593, 635, 1859, 2115
HpaII CCGG 4 cut(s) 467, 723, 959, 1031
Hpy166II GTNNAC 2 cut(s) 676, 1279
Hpy188III TCNNGA 9 cut(s) 40, 134, 297, 367, 1037, 1073, 1392, 1537, 1847
Hpy8I GTNNAC 2 cut(s) 676, 1279
Hpy99I CGWCG 1 cut(s) 1842
HpyAV CCTTC 6 cut(s) 269, 556, 616, 1123, 1444, 2033
HpyCH4III ACNGT 3 cut(s) 55, 333, 1842
HpyCH4IV ACGT 2 cut(s) 1267, 1287
HpyF3I CTNAG 6 cut(s) 38, 309, 381, 404, 411, 456
HpySE526I ACGT 2 cut(s) 1267, 1287
Hsp92II CATG 2 cut(s) 1208, 1450
Ksp22I TGATCA 2 cut(s) 130, 1315
LmnI GCTCC 5 cut(s) 224, 462, 1544, 1730, 2042
Lsp1109I GCAGC 6 cut(s) 157, 165, 1683, 1734, 1955, 2033
LweI GCATC 2 cut(s) 16, 1840
MaeI CTAG 3 cut(s) 189, 510, 1904
MaeII ACGT 2 cut(s) 1267, 1287
MaeIII GTNAC 4 cut(s) 1599, 1664, 1882, 1990
MfeI CAATTG 1 cut(s) 614
MflI RGATCY 3 cut(s) 407, 734, 1453
MhlI GDGCHC 6 cut(s) 39, 467, 1030, 1066, 1090, 1793
MlsI TGGCCA 2 cut(s) 1712, 1748
MluNI TGGCCA 2 cut(s) 1712, 1748
MlyI GAGTC 3 cut(s) 436, 584, 1853
MmeI TCCRAC 1 cut(s) 839
Mox20I TGGCCA 2 cut(s) 1712, 1748
MroXI GAANNNNTTC 3 cut(s) 592, 1631, 2114
MscI TGGCCA 2 cut(s) 1712, 1748
MseI TTAA 8 cut(s) 114, 942, 1106, 1146, 1175, 1236, 1647, 1683
MslI CAYNNNNRTG 1 cut(s) 1955
Msp20I TGGCCA 2 cut(s) 1712, 1748
MspI CCGG 4 cut(s) 467, 723, 959, 1031
MspR9I CCNGG 2 cut(s) 467, 1714
MunI CAATTG 1 cut(s) 614
MvaI CCWGG 1 cut(s) 1714
NciI CCSGG 1 cut(s) 467
NlaIII CATG 2 cut(s) 1208, 1450
NlaIV GGNNCC 3 cut(s) 295, 464, 783
NmuCI GTSAC 3 cut(s) 1664, 1882, 1990
NspI RCATGY 1 cut(s) 1208
PceI AGGCCT 1 cut(s) 647
PciI ACATGT 1 cut(s) 1204
PdmI GAANNNNTTC 3 cut(s) 592, 1631, 2114
PfeI GAWTC 3 cut(s) 593, 635, 2115
PinAI ACCGGT 2 cut(s) 958, 1030
PkrI GCNGC 6 cut(s) 155, 172, 1698, 1724, 1945, 2023
PleI GAGTC 3 cut(s) 435, 583, 1853
PpsI GAGTC 3 cut(s) 435, 583, 1853
PscI ACATGT 1 cut(s) 1204
Psp6I CCWGG 1 cut(s) 1712
PspEI GGTNACC 1 cut(s) 1664
PspGI CCWGG 1 cut(s) 1712
PspN4I GGNNCC 3 cut(s) 295, 464, 783
PspPI GGNCC 3 cut(s) 294, 1527, 1612
PsuI RGATCY 3 cut(s) 407, 734, 1453
RsaI GTAC 2 cut(s) 963, 1322
RsaNI GTAC 2 cut(s) 962, 1321
RseI CAYNNNNRTG 1 cut(s) 1955
SaqAI TTAA 8 cut(s) 114, 942, 1106, 1146, 1175, 1236, 1647, 1683
SatI GCNGC 6 cut(s) 154, 171, 1697, 1723, 1944, 2022
Sau96I GGNCC 3 cut(s) 294, 1527, 1612
SchI GAGTC 3 cut(s) 436, 584, 1853
ScrFI CCNGG 2 cut(s) 467, 1714
SduI GDGCHC 6 cut(s) 39, 467, 1030, 1066, 1090, 1793
SfaNI GCATC 2 cut(s) 16, 1840
SinI GGWCC 3 cut(s) 294, 1527, 1612
SmiMI CAYNNNNRTG 1 cut(s) 1955
SmlI CTYRAG 1 cut(s) 1537
SmoI CTYRAG 1 cut(s) 1537
SpeI ACTAGT 1 cut(s) 1903
SseBI AGGCCT 1 cut(s) 647
SsiI CCGC 2 cut(s) 1168, 1364
SspMI CTAG 3 cut(s) 189, 510, 1904
StuI AGGCCT 1 cut(s) 647
StyD4I CCNGG 2 cut(s) 465, 1712
StyI CCWWGG 1 cut(s) 485
TaaI ACNGT 3 cut(s) 55, 333, 1842
TaiI ACGT 2 cut(s) 1270, 1290
TaqI TCGA 4 cut(s) 357, 578, 638, 1933
TfiI GAWTC 3 cut(s) 593, 635, 2115
Tru1I TTAA 8 cut(s) 114, 942, 1106, 1146, 1175, 1236, 1647, 1683
Tru9I TTAA 8 cut(s) 114, 942, 1106, 1146, 1175, 1236, 1647, 1683
TscAI CASTG 7 cut(s) 58, 75, 234, 338, 1098, 1698, 1887
TseFI GTSAC 3 cut(s) 1664, 1882, 1990
TseI GCWGC 6 cut(s) 153, 170, 1696, 1722, 1943, 2021
Tsp45I GTSAC 3 cut(s) 1664, 1882, 1990
TspGWI ACGGA 2 cut(s) 1222, 2009
TspRI CASTG 7 cut(s) 58, 75, 234, 338, 1098, 1698, 1887
VpaK11BI GGWCC 3 cut(s) 294, 1527, 1612
XapI RAATTY 6 cut(s) 139, 319, 544, 1567, 1826, 1935
XceI RCATGY 1 cut(s) 1208
XcmI CCANNNNNNNNNTGG 2 cut(s) 1684, 1741
XmiI GTMKAC 1 cut(s) 1278
XmnI GAANNNNTTC 3 cut(s) 592, 1631, 2114
XspI CTAG 3 cut(s) 189, 510, 1904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.