Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0010009

Physical Location & Seq

Genomic Coordinates Forward (+)

18540171 .. 18553189

Gene Structure 13019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0198900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGGCCGCCTTAGTCGGCGCCTCCCTTATGGCCGTCTCCGCCTTCTACATCCACAAACGCAGCATCGACCAAGTCATCGACCGCCTTATCGAGATCCACCGCACGCCGCCGTCTCGCGTCCTCTCCGAAGACGACGACGACAACGAAGATTACATCGAAGAAGACGAGCAAAAGCTGCAGCAGCACCGAGGGGTTGGCTCTGACCGCGACACTGTGATCGATCGGAAAACGACGTCGTCCGGGTCCTTGGATGAGAAATCGATTCACGGCGGCCGGAAAGAGAGCAAAGAGCAGCTTGGAACCAACGGTAGCTTTGCTACATCTTGTTTCTCTATTATTGTTAACTTAGATCCTGCTGCAGAGCATTTTGACTACCCTGTGGCTTTAGATATCAGGGAGCTAATTAACTTGGATGATGTTATGGAGGAACTTGGACTGGGTCCCAATGGAGGACTTATGTACTGCATGGAACACCTTGAAGATAATCTGGATGATTGGCTTGCAGATGGATTGGAGGATTACCTGGATGATGACTACTTAATTTTGGACTGCCCAGGTATGCATATGAGCATACGTGTTCCGTTGTCTTGTGGAAGTAATTATGTTTTGGATATGACTACTCTGACTATTATGAGGGCTCTTCCAAGAGAGGTTGACCCAGCAGTGTATAATATGCTTCATGAAGATCCAGGTTCAAAGTTTCTTAGTACTGATGGCAGTACAGGCAGCAAGGCAGAAGTGAATTATTTGGGACAGTTCTATCATCCTAATCTTGTTAAACTAATTGGCTATTGCTTGGAAGATGAGCAGTGCCTTTTGGTATATGAATTCTTGCCTCGAGCTGGTGGTGAGCTATTTGGGAGGATATATAGTGCTGGTAGATTTAGTGAAGCTGAGATCATAATTGATAGTAGAAAGTCTTTGACATCAAACATGGAAGATACGTCGTCGGTTTTATCAAGCGATAGCATGCATATTGGTCTTCTTGCTGCTGCTGCTCATGCAGCTGCAACAAATAGTCGGTTTACTATATTTTATAATCCAAGAGCAAGTCCTTCTGAATTTGTGATACCCCTGGCCAAGTATGTTAAAGCCGTCTATCATACACGTGTTTCTGTGGGAATGCGATTTAGGATGCTGTTTGAGACAGAAGAATCAAGTGTTCGCCGTTTTTGGGTTGCTTGTTTTGTTTCATGGGTACATTATCAGATTGCGTCTTTGGATGCTTTTATGATAAATAAGCTGCAATGTGTTACATTTTGCGGTTCTTATAATGCACAGAACTTGCAATCTTCAAATGTTTCAAATGGGCCTGCTGCTATGCTTCAAAGACATAGTTTACCTCATTCTCAGTCTCAGAATACTTTTCTCCAGAGCTTTCAAGAAAACCAAGCTCCTGCTTCTCAGCTGTTGCAACAACAGTTGCGTTATCATCCATATAATAATGATCAGAGGCAGCAGCAGCAGCATCAACAGCAGCAGCTTCAACAATCCCAGAATATGCACCAATTTTCTGTTCAGCAGCAGATTCCCAATGTAATGTCTTCTCTATCTAATTTTGCTACTCAAGGGGGAGATCAATTGAAGCAAGCTGCTGAGGCCCATGATACTGCAAAAGCCACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CTD_bind

Protein Analysis

541

Amino Acids

60.69

Weight (kDa)

4.96

Isoelectric Point (pI)

54.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATP_bind_1	PF03029	112 - 186	1.4e-26	Conserved hypothetical ATP binding protein
ARF_AD	PF06507	355 - 391	1.3e-08	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010009)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10060 AT5G65180 AT5G65180
fragaria_vesca	FvH4_1g21760 FvH4_1g21760
malus_domestica	MD01G1022500.v1.1 MD15G1330000.v1.1
prunus_persica	Prupe.6G178300_v2.0.a1
pyrus_communis	pycom01g05100 pycom15g29550
rosa_chinensis	RchiOBHm_Chr2g0115631
rosa_laevigata	RLG00000018199
rosa_roxburghii	Rroxscaffold_2G00128040 Rroxscaffold_2G00128910
rosa_rugosa	Rorug02G0198800 Rorug02G0198900
rosa_samantha	Rh2AG256000 Rh2BG266800 Rh2CG261400 Rh2DG264300
rosa_wichuraiana	Rw2G020040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1038, 1272
AatII	GACGTC	1 cut(s)	236
AccB1I	GGYRCC	1 cut(s)	17
AccII	CGCG	2 cut(s)	117, 207
AciI	CCGC	8 cut(s)	6, 39, 82, 100, 107, 205, 270, 1263
AclWI	GGATC	3 cut(s)	88, 344, 680
AcoI	YGGCCR	4 cut(s)	3, 30, 271, 1077
AcsI	RAATTY	2 cut(s)	827, 1061
AcvI	CACGTG	1 cut(s)	1109
AcyI	GRCGYC	2 cut(s)	18, 233
AfaI	GTAC	4 cut(s)	461, 709, 721, 1200
AfiI	CCNNNNNNNGG	3 cut(s)	449, 842, 1174
AflIII	ACRYGT	3 cut(s)	574, 1106, 1108
AgsI	TTSAA	8 cut(s)	479, 696, 1296, 1305, 1328, 1382, 1487, 1585
AjnI	CCWGG	4 cut(s)	522, 553, 688, 1074
AjuI	GAANNNNNNNTTGG	2 cut(s)	1500, 1532
Alw26I	GTCTC	4 cut(s)	40, 117, 1139, 1359
AlwI	GGATC	3 cut(s)	88, 344, 680
Ama87I	CYCGRG	1 cut(s)	837
AoxI	GGCC	6 cut(s)	3, 30, 271, 1077, 1310, 1599
ApoI	RAATTY	2 cut(s)	827, 1061
AspLEI	GCGC	1 cut(s)	20
AspS9I	GGNCC	4 cut(s)	243, 440, 1310, 1600
AsuC2I	CCSGG	1 cut(s)	241
AsuHPI	GGTGA	1 cut(s)	860
AvaI	CYCGRG	1 cut(s)	837
AvaII	GGWCC	2 cut(s)	243, 440
BalI	TGGCCA	1 cut(s)	1079
BanI	GGYRCC	1 cut(s)	17
BanII	GRGCYC	1 cut(s)	640
BbrPI	CACGTG	1 cut(s)	1109
BbsI	GAAGAC	4 cut(s)	135, 168, 974, 1536
BbvCI	CCTCAGC	1 cut(s)	1596
BccI	CCATC	2 cut(s)	500, 707
BceAI	ACGGC	5 cut(s)	17, 94, 283, 1079, 1152
BciT130I	CCWGG	4 cut(s)	524, 555, 690, 1076
BclI	TGATCA	1 cut(s)	1447
BcnI	CCSGG	1 cut(s)	241
BcoDI	GTCTC	4 cut(s)	40, 117, 1139, 1359
BfmI	CTRYAG	2 cut(s)	176, 357
BfoI	RGCGCY	1 cut(s)	21
BmcAI	AGTACT	1 cut(s)	709
Bme1390I	CCNGG	5 cut(s)	241, 524, 555, 690, 1076
Bme18I	GGWCC	2 cut(s)	243, 440
BmeT110I	CYCGRG	1 cut(s)	837
BmgT120I	GGNCC	4 cut(s)	243, 440, 1310, 1600
BmiI	GGNNCC	5 cut(s)	19, 244, 301, 441, 442
BmrFI	CCNGG	5 cut(s)	241, 524, 555, 690, 1076
BmrI	ACTGGG	1 cut(s)	446
BmsI	GCATC	4 cut(s)	72, 1125, 1213, 1477
BmuI	ACTGGG	1 cut(s)	446
BpiI	GAAGAC	4 cut(s)	135, 168, 974, 1536
BpmI	CTGGAG	1 cut(s)	1355
Bpu10I	CCTNAGC	1 cut(s)	1596
BpuEI	CTTGAG	1 cut(s)	1551
BpuMI	CCSGG	1 cut(s)	241
Bsa29I	ATCGAT	2 cut(s)	219, 260
BsaAI	YACGTR	2 cut(s)	575, 1109
BsaHI	GRCGYC	2 cut(s)	18, 233
BsaJI	CCNNGG	4 cut(s)	187, 246, 553, 1074
Bsc4I	CCNNNNNNNGG	3 cut(s)	449, 842, 1174
Bse1I	ACTGG	1 cut(s)	441
Bse3DI	GCAATG	1 cut(s)	1253
BseBI	CCWGG	4 cut(s)	524, 555, 690, 1076
BseCI	ATCGAT	2 cut(s)	219, 260
BseDI	CCNNGG	4 cut(s)	187, 246, 553, 1074
BseGI	GGATG	9 cut(s)	48, 256, 418, 496, 532, 763, 1140, 1228, 1432
BseLI	CCNNNNNNNGG	3 cut(s)	449, 842, 1174
BseMI	GCAATG	1 cut(s)	1253
BseMII	CTCAG	5 cut(s)	885, 1364, 1370, 1418, 1587
BseNI	ACTGG	1 cut(s)	441
BseX3I	CGGCCG	1 cut(s)	271
BseYI	CCCAGC	1 cut(s)	658
Bsh1236I	CGCG	2 cut(s)	117, 207
Bsh1285I	CGRYCG	3 cut(s)	82, 223, 274
BshFI	GGCC	6 cut(s)	5, 32, 273, 1079, 1312, 1601
BshNI	GGYRCC	1 cut(s)	17
BshVI	ATCGAT	2 cut(s)	219, 260
BsiEI	CGRYCG	3 cut(s)	82, 223, 274
BsiHKCI	CYCGRG	1 cut(s)	837
BsiSI	CCGG	2 cut(s)	240, 274
BslFI	GGGAC	2 cut(s)	426, 765
BslI	CCNNNNNNNGG	3 cut(s)	449, 842, 1174
BsmAI	GTCTC	4 cut(s)	40, 117, 1139, 1359
BsmBI	CGTCTC	2 cut(s)	40, 117
BsmFI	GGGAC	2 cut(s)	426, 765
BsmI	GAATGC	1 cut(s)	1128
BsnI	GGCC	6 cut(s)	5, 32, 273, 1079, 1312, 1601
BsoBI	CYCGRG	1 cut(s)	837
Bsp1286I	GDGCHC	1 cut(s)	640
Bsp143I	GATC	8 cut(s)	93, 216, 220, 349, 685, 897, 1447, 1576
BspACI	CCGC	8 cut(s)	6, 39, 82, 100, 107, 205, 270, 1263
BspANI	GGCC	6 cut(s)	5, 32, 273, 1079, 1312, 1601
BspCNI	CTCAG	5 cut(s)	886, 1363, 1369, 1417, 1588
BspDI	ATCGAT	2 cut(s)	219, 260
BspFNI	CGCG	2 cut(s)	117, 207
BspHI	TCATGA	1 cut(s)	679
BspLI	GGNNCC	5 cut(s)	19, 244, 301, 441, 442
BspMAI	CTGCAG	2 cut(s)	180, 361
BspPI	GGATC	3 cut(s)	88, 344, 680
BspQI	GCTCTTC	1 cut(s)	645
BspT107I	GGYRCC	1 cut(s)	17
BsrDI	GCAATG	1 cut(s)	1253
BsrI	ACTGG	1 cut(s)	441
BssECI	CCNNGG	4 cut(s)	187, 246, 553, 1074
BssMI	GATC	8 cut(s)	93, 216, 220, 349, 685, 897, 1447, 1576
BssNI	GRCGYC	2 cut(s)	18, 233
BssT1I	CCWWGG	1 cut(s)	246
Bst2UI	CCWGG	4 cut(s)	524, 555, 690, 1076
Bst4CI	ACNGT	4 cut(s)	214, 308, 756, 1422
Bst6I	CTCTTC	1 cut(s)	645
BstACI	GRCGYC	2 cut(s)	18, 233
BstAPI	GCANNNNNTGC	1 cut(s)	175
BstBAI	YACGTR	2 cut(s)	575, 1109
BstC8I	GCNNGC	5 cut(s)	104, 501, 971, 1314, 1590
BstDEI	CTNAG	8 cut(s)	10, 346, 704, 894, 1350, 1356, 1404, 1596
BstF5I	GGATG	9 cut(s)	48, 256, 418, 496, 532, 763, 1140, 1228, 1432
BstFNI	CGCG	2 cut(s)	117, 207
BstH2I	RGCGCY	1 cut(s)	21
BstHHI	GCGC	1 cut(s)	20
BstKTI	GATC	8 cut(s)	96, 219, 223, 352, 688, 900, 1450, 1579
BstMAI	GTCTC	4 cut(s)	40, 117, 1139, 1359
BstMBI	GATC	8 cut(s)	93, 216, 220, 349, 685, 897, 1447, 1576
BstMCI	CGRYCG	3 cut(s)	82, 223, 274
BstNI	CCWGG	4 cut(s)	524, 555, 690, 1076
BstNSI	RCATGY	1 cut(s)	973
BstSCI	CCNGG	5 cut(s)	239, 522, 553, 688, 1074
BstSFI	CTRYAG	2 cut(s)	176, 357
BstUI	CGCG	2 cut(s)	117, 207
BstV2I	GAAGAC	4 cut(s)	135, 168, 974, 1536
BstX2I	RGATCY	3 cut(s)	93, 349, 685
BstYI	RGATCY	3 cut(s)	93, 349, 685
BstZI	CGGCCG	1 cut(s)	271
Bsu15I	ATCGAT	2 cut(s)	219, 260
BsuRI	GGCC	6 cut(s)	5, 32, 273, 1079, 1312, 1601
BsuTUI	ATCGAT	2 cut(s)	219, 260
BtsCI	GGATG	9 cut(s)	48, 256, 418, 496, 532, 763, 1140, 1228, 1432
BtsI	GCAGTG	2 cut(s)	669, 815
BtsIMutI	CAGTG	3 cut(s)	210, 669, 815
Cac8I	GCNNGC	5 cut(s)	104, 501, 971, 1314, 1590
CciI	TCATGA	1 cut(s)	679
CfoI	GCGC	1 cut(s)	20
Cfr13I	GGNCC	4 cut(s)	243, 440, 1310, 1600
ClaI	ATCGAT	2 cut(s)	219, 260
CseI	GACGC	2 cut(s)	106, 1203
Csp6I	GTAC	4 cut(s)	460, 708, 720, 1199
CviAII	CATG	7 cut(s)	466, 680, 934, 970, 1001, 1194, 1604
CviQI	GTAC	4 cut(s)	460, 708, 720, 1199
DdeI	CTNAG	8 cut(s)	10, 346, 704, 894, 1350, 1356, 1404, 1596
DinI	GGCGCC	1 cut(s)	19
DpnI	GATC	8 cut(s)	95, 218, 222, 351, 687, 899, 1449, 1578
DpnII	GATC	8 cut(s)	93, 216, 220, 349, 685, 897, 1447, 1576
EaeI	YGGCCR	4 cut(s)	3, 30, 271, 1077
EagI	CGGCCG	1 cut(s)	271
Eam1104I	CTCTTC	1 cut(s)	645
EarI	CTCTTC	1 cut(s)	645
EciI	GGCGGA	1 cut(s)	28
EclXI	CGGCCG	1 cut(s)	271
Eco130I	CCWWGG	1 cut(s)	246
Eco24I	GRGCYC	1 cut(s)	640
Eco32I	GATATC	1 cut(s)	391
Eco47I	GGWCC	2 cut(s)	243, 440
Eco52I	CGGCCG	1 cut(s)	271
Eco72I	CACGTG	1 cut(s)	1109
Eco88I	CYCGRG	1 cut(s)	837
EcoO109I	RGGNCCY	2 cut(s)	243, 440
EcoRI	GAATTC	1 cut(s)	827
EcoRII	CCWGG	4 cut(s)	522, 553, 688, 1074
EcoRV	GATATC	1 cut(s)	391
EcoT14I	CCWWGG	1 cut(s)	246
EcoT22I	ATGCAT	2 cut(s)	564, 975
EcoT38I	GRGCYC	1 cut(s)	640
EgeI	GGCGCC	1 cut(s)	19
EheI	GGCGCC	1 cut(s)	19
ErhI	CCWWGG	1 cut(s)	246
Esp3I	CGTCTC	2 cut(s)	40, 117
FaeI	CATG	7 cut(s)	469, 683, 937, 973, 1004, 1197, 1607
FalI	AAGNNNNNCTT	2 cut(s)	279, 311
FaqI	GGGAC	2 cut(s)	426, 765
FatI	CATG	7 cut(s)	465, 679, 933, 969, 1000, 1193, 1603
FauNDI	CATATG	1 cut(s)	564
FbaI	TGATCA	1 cut(s)	1447
FokI	GGATG	9 cut(s)	35, 263, 425, 503, 539, 750, 1147, 1235, 1419
FriOI	GRGCYC	1 cut(s)	640
GlaI	GCGC	1 cut(s)	19
GsaI	CCCAGC	1 cut(s)	662
GsuI	CTGGAG	1 cut(s)	1355
HaeII	RGCGCY	1 cut(s)	21
HaeIII	GGCC	6 cut(s)	5, 32, 273, 1079, 1312, 1601
HapII	CCGG	2 cut(s)	240, 274
HgaI	GACGC	2 cut(s)	106, 1203
HhaI	GCGC	1 cut(s)	20
Hin1I	GRCGYC	2 cut(s)	18, 233
Hin1II	CATG	7 cut(s)	469, 683, 937, 973, 1004, 1197, 1607
Hin6I	GCGC	1 cut(s)	18
HinP1I	GCGC	1 cut(s)	18
HincII	GTYRAC	2 cut(s)	343, 655
HindII	GTYRAC	2 cut(s)	343, 655
HinfI	GANTC	3 cut(s)	262, 1154, 1528
HpaI	GTTAAC	1 cut(s)	343
HpaII	CCGG	2 cut(s)	240, 274
HphI	GGTGA	1 cut(s)	860
Hpy166II	GTNNAC	4 cut(s)	343, 655, 1026, 1340
Hpy188I	TCNGA	8 cut(s)	127, 202, 225, 624, 1060, 1209, 1359, 1452
Hpy188III	TCNNGA	5 cut(s)	91, 488, 680, 1372, 1382
Hpy8I	GTNNAC	4 cut(s)	343, 655, 1026, 1340
Hpy99I	CGWCG	6 cut(s)	137, 140, 235, 238, 949, 952
HpyAV	CCTTC	2 cut(s)	52, 1065
HpyCH4III	ACNGT	4 cut(s)	214, 308, 756, 1422
HpyCH4IV	ACGT	4 cut(s)	233, 574, 944, 1108
HpyF3I	CTNAG	8 cut(s)	10, 346, 704, 894, 1350, 1356, 1404, 1596
HpySE526I	ACGT	4 cut(s)	233, 574, 944, 1108
Hsp92I	GRCGYC	2 cut(s)	18, 233
Hsp92II	CATG	7 cut(s)	469, 683, 937, 973, 1004, 1197, 1607
HspAI	GCGC	1 cut(s)	18
KasI	GGCGCC	1 cut(s)	17
KflI	GGGWCCC	1 cut(s)	440
Ksp22I	TGATCA	1 cut(s)	1447
KspAI	GTTAAC	1 cut(s)	343
Kzo9I	GATC	8 cut(s)	93, 216, 220, 349, 685, 897, 1447, 1576
LguI	GCTCTTC	1 cut(s)	645
LmnI	GCTCC	2 cut(s)	397, 1399
LweI	GCATC	4 cut(s)	72, 1125, 1213, 1477
MaeII	ACGT	4 cut(s)	233, 574, 944, 1108
MaeIII	GTNAC	1 cut(s)	1252
MalI	GATC	8 cut(s)	95, 218, 222, 351, 687, 899, 1449, 1578
MboI	GATC	8 cut(s)	93, 216, 220, 349, 685, 897, 1447, 1576
MfeI	CAATTG	1 cut(s)	1580
MflI	RGATCY	3 cut(s)	93, 349, 685
MhlI	GDGCHC	1 cut(s)	640
MlsI	TGGCCA	1 cut(s)	1079
MluNI	TGGCCA	1 cut(s)	1079
Mly113I	GGCGCC	1 cut(s)	18
Mox20I	TGGCCA	1 cut(s)	1079
Mph1103I	ATGCAT	2 cut(s)	564, 975
MscI	TGGCCA	1 cut(s)	1079
MseI	TTAA	5 cut(s)	342, 405, 539, 777, 1089
MslI	CAYNNNNRTG	1 cut(s)	1107
Msp20I	TGGCCA	1 cut(s)	1079
MspA1I	CMGCKG	2 cut(s)	1007, 1408
MspI	CCGG	2 cut(s)	240, 274
MspR9I	CCNGG	5 cut(s)	241, 524, 555, 690, 1076
MunI	CAATTG	1 cut(s)	1580
Mva1269I	GAATGC	1 cut(s)	1128
MvaI	CCWGG	4 cut(s)	524, 555, 690, 1076
MvnI	CGCG	2 cut(s)	117, 207
NarI	GGCGCC	1 cut(s)	18
NciI	CCSGG	1 cut(s)	241
NdeI	CATATG	1 cut(s)	564
NdeII	GATC	8 cut(s)	93, 216, 220, 349, 685, 897, 1447, 1576
NlaIII	CATG	7 cut(s)	469, 683, 937, 973, 1004, 1197, 1607
NlaIV	GGNNCC	5 cut(s)	19, 244, 301, 441, 442
NsiI	ATGCAT	2 cut(s)	564, 975
NspI	RCATGY	1 cut(s)	973
PaeI	GCATGC	1 cut(s)	973
PaeR7I	CTCGAG	1 cut(s)	837
PagI	TCATGA	1 cut(s)	679
PciSI	GCTCTTC	1 cut(s)	645
PcsI	WCGNNNNNNNCGW	2 cut(s)	141, 162
PctI	GAATGC	1 cut(s)	1128
PfeI	GAWTC	3 cut(s)	262, 1154, 1528
PflFI	GACNNNGTC	3 cut(s)	71, 235, 438
Ple19I	CGATCG	1 cut(s)	223
PluTI	GGCGCC	1 cut(s)	21
PmaCI	CACGTG	1 cut(s)	1109
PmlI	CACGTG	1 cut(s)	1109
Ppu21I	YACGTR	2 cut(s)	575, 1109
PpuMI	RGGWCCY	2 cut(s)	243, 440
PsiI	TTATAA	2 cut(s)	1038, 1272
Psp5II	RGGWCCY	2 cut(s)	243, 440
Psp6I	CCWGG	4 cut(s)	522, 553, 688, 1074
PspCI	CACGTG	1 cut(s)	1109
PspFI	CCCAGC	1 cut(s)	658
PspGI	CCWGG	4 cut(s)	522, 553, 688, 1074
PspN4I	GGNNCC	5 cut(s)	19, 244, 301, 441, 442
PspPI	GGNCC	4 cut(s)	243, 440, 1310, 1600
PspPPI	RGGWCCY	2 cut(s)	243, 440
PspXI	VCTCGAGB	1 cut(s)	837
PstI	CTGCAG	2 cut(s)	180, 361
PsuI	RGATCY	3 cut(s)	93, 349, 685
PsyI	GACNNNGTC	3 cut(s)	71, 235, 438
PvuI	CGATCG	1 cut(s)	223
PvuII	CAGCTG	2 cut(s)	1007, 1408
RsaI	GTAC	4 cut(s)	461, 709, 721, 1200
RsaNI	GTAC	4 cut(s)	460, 708, 720, 1199
RseI	CAYNNNNRTG	1 cut(s)	1107
SapI	GCTCTTC	1 cut(s)	645
SaqAI	TTAA	5 cut(s)	342, 405, 539, 777, 1089
Sau3AI	GATC	8 cut(s)	93, 216, 220, 349, 685, 897, 1447, 1576
Sau96I	GGNCC	4 cut(s)	243, 440, 1310, 1600
ScaI	AGTACT	1 cut(s)	709
ScrFI	CCNGG	5 cut(s)	241, 524, 555, 690, 1076
SduI	GDGCHC	1 cut(s)	640
SfaNI	GCATC	4 cut(s)	72, 1125, 1213, 1477
SfcI	CTRYAG	2 cut(s)	176, 357
SfoI	GGCGCC	1 cut(s)	19
Sfr274I	CTCGAG	1 cut(s)	837
SinI	GGWCC	2 cut(s)	243, 440
SlaI	CTCGAG	1 cut(s)	837
SmiMI	CAYNNNNRTG	1 cut(s)	1107
SmlI	CTYRAG	2 cut(s)	837, 1566
SmoI	CTYRAG	2 cut(s)	837, 1566
SphI	GCATGC	1 cut(s)	973
SsiI	CCGC	8 cut(s)	6, 39, 82, 100, 107, 205, 270, 1263
SspDI	GGCGCC	1 cut(s)	17
StyD4I	CCNGG	5 cut(s)	239, 522, 553, 688, 1074
StyI	CCWWGG	1 cut(s)	246
TaaI	ACNGT	4 cut(s)	214, 308, 756, 1422
TaiI	ACGT	4 cut(s)	236, 577, 947, 1111
TaqI	TCGA	7 cut(s)	66, 78, 90, 156, 219, 260, 838
TatI	WGTACW	3 cut(s)	459, 707, 719
TauI	GCSGC	3 cut(s)	8, 109, 273
TfiI	GAWTC	3 cut(s)	262, 1154, 1528
Tru1I	TTAA	5 cut(s)	342, 405, 539, 777, 1089
Tru9I	TTAA	5 cut(s)	342, 405, 539, 777, 1089
TscAI	CASTG	3 cut(s)	217, 669, 815
TspDTI	ATGAA	4 cut(s)	668, 696, 840, 1182
TspGWI	ACGGA	1 cut(s)	570
TspRI	CASTG	3 cut(s)	217, 669, 815
Tth111I	GACNNNGTC	3 cut(s)	71, 235, 438
VpaK11BI	GGWCC	2 cut(s)	243, 440
XapI	RAATTY	2 cut(s)	827, 1061
XceI	RCATGY	1 cut(s)	973
XhoI	CTCGAG	1 cut(s)	837
ZraI	GACGTC	1 cut(s)	234
ZrmI	AGTACT	1 cut(s)	709
Zsp2I	ATGCAT	2 cut(s)	564, 975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.