Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004103

Physical Location & Seq

Genomic Coordinates Forward (+)

22681776 .. 22683858

Gene Structure 2083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0228700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGCTTAATATCCATGTCAACAGCCATTTGGAGGCCAGTAAACAAACCCCAGGCCTAAATCGGCTTCTAGTGATGATGTTGATACTCCTGAGAACTAACGCCCGTTTGAACATCCTTTCAGGTTGTTATTACAAACCCCAACGCTTGGTTCCTTCACTGCTCAAGCTGTTCTCAACCCATGATGTGTACACTTGCAACGTCAAGATTGGCTCTCTCTTTCGAGCGGGTCATATTGAAGCCGCCCGCCAACTGTTCGACGAAATGCCCCAGAGAGACGTGGTTACATGGAACGCTCTCGTTACTGGGTACTGGAAAAACGGTTACTTTCAGGAATCAAAGAGTCTGTTCGAATCGATGCCTCTCAGGAATGTGGTGTCCTGGAACTCCATGGTAGCCGGGTGCGTCGAAAATGGGATGGTTGATGAGGCTTTCGGCTACTTTCGAGCCATGCCCGAGAGGAACATTGCTTCTTGGAATGCTATGATATCTGGGTTTTTGAAGTGTGATCGGGTGGAGGAAGCTAGTAGGCTTTTTGTGGAGATGCCGTGTAGGAATGTGATTTCTTATACGGCGATGATTGATGGGTTTGCGAAGATAGGAGAGGTGGAGAAGGCAAGAGCATTGTTTGATGTCATGCCGCGTAAAAATGCGGTTTCTTGGACTGTGCTGATTAGTGGGTATGTGGAGAATGGGAGGTTTGATGAAGCTAGGGAATTGTACAAGCAGATGCCGGAGAAAAATGTGGTTGCAGTGACTGCTATGATCACTGGGTGCTGTAAGGAGGGTAAGATGGAAGAAGCTAGAGATTTATTCGACGCAATTCAGTTCAAGGACGATGTCTGTTGGAATGCAATGATAACAGGCTATGCACAAAATGGTAGGGGAGAGGAAGCATTGAAGTTACATTCACAAAAGCTCAAGATTGGTTTGCATCCAGATAACTGGACCCTTGTTTCTGTTCTTATGGCCTGTTCTACTCTTGCGTCACTGAAGGATGGAAGACAAGCTCATGTGCTCATTATTAAACATGGTCTCGAATCAAATGTCTCCATAAGTAATGCTTTGATTACCATGTACTGCAGATGTGGTGTGATTCTTGACTCTGAGTTAGCTTTCAAACAAATTGGGAGTCCAGACCTTGTCTCATGGAACACCATTGTTGCTGCATTTGCACGGCATGGTCTCTATGAGAAGGCTTCTGCTTTTTTCAACCAGATGAGGGTCAGTGGCTTTGAACCGGATGGCATAACATTTCTTAGTGTCTTATCTGCTTGTGCTCGTGTGGGGAAGGTGAATGAGAGCATGGATTTGTTCGACTCAATGGTCAATAACTATGGTATTGCCCCTGGGTCGGAGCATTATGCTTGCTTAATTGATCTATTGAGTCGAGCAGGTCAGTTAGAGAAAGCTTGCAAGATGATCCAAGAGATGCCATTTGAAGCAGACTTTGGGATTTGGGGAGCTCTTCTTTCAGCTTCCAGTGTTCATTCAAATGTCGAAATAGGGGAACTGGCTGCTAAGAATATGTTAGACTTGGATCCCCAGAGTTCTGGGCCTTATGTCATATTGTCCAATATGTATGCAGCTGCTGGAAAATGGAATGATGTTGCTAGAGTGAGGAGTTTGATGAAAAAGCATGGAGTCAAGAAGCAACAGGCATGTAGTTGGATAGAGATTGGGAATAAGGTGCACAATTTCGTTGGAGGGGATATATCGCATCCAAATGTTGATAATATTCATTTGGTGCTCAAGAAGATCAGCCTGCATATGGCTGCAAATAATTTCACACACATCAGTTTCTCATGGAGCTCTTCTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008150 GO:0008374 GO:0009987 GO:0012505 GO:0016407 GO:0016413 GO:0016740 GO:0016746 GO:0016747 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071554

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PC-Esterase PMR5N

Protein Analysis

606

Amino Acids

67.5

Weight (kDa)

7.54

Isoelectric Point (pI)

39.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	94 - 123	6.2e-06	PPR repeat
PPR_2	PF13041	122 - 155	4.4e-06	PPR repeat family
PPR	PF01535	125 - 155	2.9e-07	PPR repeat
PPR_2	PF13041	154 - 186	4.5e-07	PPR repeat family
PPR	PF01535	157 - 185	1.2e-06	PPR repeat
PPR_2	PF13041	184 - 216	4.2e-06	PPR repeat family
PPR_1	PF12854	184 - 212	1.2e-06	PPR repeat
PPR	PF01535	187 - 216	2.1e-06	PPR repeat
PPR_2	PF13041	215 - 248	1.4e-07	PPR repeat family
PPR	PF01535	218 - 248	7.6e-09	PPR repeat
PPR_2	PF13041	246 - 272	7.6e-06	PPR repeat family
PPR	PF01535	249 - 273	5.7e-06	PPR repeat
PPR_2	PF13041	278 - 324	1.3e-07	PPR repeat family
PPR	PF01535	280 - 304	1.9e-06	PPR repeat
PPR_2	PF13041	378 - 427	1.6e-11	PPR repeat family
PPR	PF01535	381 - 411	2e-06	PPR repeat
E_motif	PF20431	496 - 558	2.9e-23	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0004103)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48880
fragaria_vesca	FvH4_1g24130 FvH4_2g14650 FvH4_2g14650 FvH4_2g14650
malus_domestica	MD05G1015200.v1.1
prunus_persica	Prupe.8G018900_v2.0.a1 Prupe.8G018900_v2.0.a1
pyrus_communis	pycom05g00830
rosa_chinensis	RchiOBHm_Chr2g0120351 RchiOBHm_Chr6g0277131
rosa_laevigata	RLG00000013329 RLG00000018550
rosa_multiflora	Rmu_sc0005082.1_g000004 Rmu_sc0005082.1_g000006 Rmu_sc0006244.1_g000042 Rmu_sc0011301.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123500 Rroxscaffold_7G00191580
rosa_rugosa	Rorug02G0228600 Rorug02G0228700 Rorug02G0228800 Rorug06G0106500
rosa_samantha	Rh2AG285000 Rh2BG295900 Rh2CG273600 Rh2DG310000 Rh6AG217200 Rh6BG221200 Rh6CG224100 Rh6DG213800
rosa_wichuraiana	Rw2G022870 Rw6G018960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1322
Acc36I	ACCTGC	1 cut(s)	1382
AccB7I	CCANNNNNTGG	1 cut(s)	145
AccBSI	CCGCTC	1 cut(s)	224
AccII	CGCG	1 cut(s)	640
AciI	CCGC	5 cut(s)	224, 240, 244, 638, 650
AclWI	GGATC	3 cut(s)	1414, 1532, 1545
AcuI	CTGAAG	1 cut(s)	1010
AdeI	CACNNNGTG	1 cut(s)	771
AfaI	GTAC	4 cut(s)	188, 308, 719, 1076
AfiI	CCNNNNNNNGG	5 cut(s)	31, 145, 1219, 1351, 1768
AjiI	CACGTC	1 cut(s)	277
AjnI	CCWGG	3 cut(s)	49, 377, 1345
AjuI	GAANNNNNNNTTGG	4 cut(s)	132, 164, 1431, 1463
Alw21I	GWGCWC	6 cut(s)	1017, 1279, 1465, 1692, 1749, 1811
Alw26I	GTCTC	5 cut(s)	267, 1037, 1051, 1147, 1187
Alw44I	GTGCAC	1 cut(s)	1688
AlwI	GGATC	3 cut(s)	1414, 1532, 1545
AlwNI	CAGNNNCTG	2 cut(s)	755, 1589
Ama87I	CYCGRG	1 cut(s)	452
AoxI	GGCC	4 cut(s)	33, 52, 966, 1553
ApaLI	GTGCAC	1 cut(s)	1688
ApeKI	GCWGC	5 cut(s)	1163, 1514, 1583, 1586, 1772
ArsI	GACNNNNNNTTYG	4 cut(s)	1029, 1061, 1114, 1146
AspS9I	GGNCC	2 cut(s)	945, 1553
AsuC2I	CCSGG	1 cut(s)	397
AsuHPI	GGTGA	1 cut(s)	1303
AsuII	TTCGAA	1 cut(s)	348
AvaI	CYCGRG	1 cut(s)	452
AvaII	GGWCC	1 cut(s)	945
BaeGI	GKGCMC	1 cut(s)	1692
BamHI	GGATCC	1 cut(s)	1537
BanII	GRGCYC	2 cut(s)	1465, 1811
BauI	CACGAG	1 cut(s)	1278
BbsI	GAAGAC	1 cut(s)	1006
Bbv12I	GWGCWC	6 cut(s)	1017, 1279, 1465, 1692, 1749, 1811
BbvI	GCAGC	5 cut(s)	1150, 1501, 1573, 1595, 1759
BccI	CCATC	5 cut(s)	409, 575, 784, 989, 1235
BceAI	ACGGC	3 cut(s)	529, 585, 1190
BciT130I	CCWGG	3 cut(s)	51, 379, 1347
BclI	TGATCA	1 cut(s)	762
BcnI	CCSGG	1 cut(s)	397
BcoDI	GTCTC	5 cut(s)	267, 1037, 1051, 1147, 1187
BfaI	CTAG	5 cut(s)	68, 522, 708, 801, 1611
BfmI	CTRYAG	1 cut(s)	1078
BfuAI	ACCTGC	1 cut(s)	1382
BisI	GCNGC	7 cut(s)	240, 638, 1164, 1515, 1584, 1587, 1773
BlsI	GCNGC	7 cut(s)	241, 639, 1165, 1516, 1585, 1588, 1774
Bme1390I	CCNGG	4 cut(s)	51, 379, 397, 1347
Bme18I	GGWCC	1 cut(s)	945
BmeT110I	CYCGRG	1 cut(s)	452
BmgBI	CACGTC	1 cut(s)	277
BmgT120I	GGNCC	2 cut(s)	945, 1553
BmiI	GGNNCC	3 cut(s)	150, 947, 1539
BmrFI	CCNGG	4 cut(s)	51, 379, 397, 1347
BmrI	ACTGGG	2 cut(s)	312, 777
BmsI	GCATC	6 cut(s)	345, 531, 717, 940, 1419, 1726
BmuI	ACTGGG	2 cut(s)	312, 777
BpiI	GAAGAC	1 cut(s)	1006
Bpu14I	TTCGAA	1 cut(s)	348
BpuEI	CTTGAG	3 cut(s)	146, 902, 1733
BpuMI	CCSGG	1 cut(s)	397
Bsa29I	ATCGAT	1 cut(s)	353
BsaI	GGTCTC	2 cut(s)	1037, 1187
BsaJI	CCNNGG	4 cut(s)	49, 387, 1345, 1346
BsaWI	WCCGGW	1 cut(s)	1237
BsaXI	ACNNNNNCTCC	2 cut(s)	530, 560
Bsc4I	CCNNNNNNNGG	5 cut(s)	31, 145, 1219, 1351, 1768
Bse1I	ACTGG	7 cut(s)	36, 307, 314, 772, 947, 1479, 1515
Bse3DI	GCAATG	2 cut(s)	462, 858
BseBI	CCWGG	3 cut(s)	51, 379, 1347
BseCI	ATCGAT	1 cut(s)	353
BseDI	CCNNGG	4 cut(s)	49, 387, 1345, 1346
BseGI	GGATG	6 cut(s)	111, 420, 931, 1000, 1246, 1717
BseLI	CCNNNNNNNGG	5 cut(s)	31, 145, 1219, 1351, 1768
BseMI	GCAATG	2 cut(s)	462, 858
BseMII	CTCAG	3 cut(s)	80, 376, 1095
BseNI	ACTGG	7 cut(s)	36, 307, 314, 772, 947, 1479, 1515
BseRI	GAGGAG	1 cut(s)	1633
BseSI	GKGCMC	1 cut(s)	1692
BseXI	GCAGC	5 cut(s)	1150, 1501, 1573, 1595, 1759
Bsh1236I	CGCG	1 cut(s)	640
BshFI	GGCC	4 cut(s)	35, 54, 968, 1555
BshVI	ATCGAT	1 cut(s)	353
BsiHKAI	GWGCWC	6 cut(s)	1017, 1279, 1465, 1692, 1749, 1811
BsiHKCI	CYCGRG	1 cut(s)	452
BsiSI	CCGG	3 cut(s)	396, 731, 1238
BslI	CCNNNNNNNGG	5 cut(s)	31, 145, 1219, 1351, 1768
BsmAI	GTCTC	5 cut(s)	267, 1037, 1051, 1147, 1187
BsmBI	CGTCTC	1 cut(s)	267
BsmI	GAATGC	2 cut(s)	481, 853
BsnI	GGCC	4 cut(s)	35, 54, 968, 1555
Bso31I	GGTCTC	2 cut(s)	1037, 1187
BsoBI	CYCGRG	1 cut(s)	452
Bsp119I	TTCGAA	1 cut(s)	348
Bsp1286I	GDGCHC	6 cut(s)	1017, 1279, 1465, 1692, 1749, 1811
Bsp1407I	TGTACA	2 cut(s)	186, 717
Bsp143I	GATC	6 cut(s)	505, 762, 1375, 1419, 1537, 1755
Bsp19I	CCATGG	1 cut(s)	387
BspACI	CCGC	5 cut(s)	224, 240, 244, 638, 650
BspANI	GGCC	4 cut(s)	35, 54, 968, 1555
BspCNI	CTCAG	3 cut(s)	81, 375, 1096
BspDI	ATCGAT	1 cut(s)	353
BspFNI	CGCG	1 cut(s)	640
BspLI	GGNNCC	3 cut(s)	150, 947, 1539
BspMAI	CTGCAG	1 cut(s)	1082
BspMI	ACCTGC	1 cut(s)	1382
BspPI	GGATC	3 cut(s)	1414, 1532, 1545
BspQI	GCTCTTC	2 cut(s)	1470, 1816
BspT104I	TTCGAA	1 cut(s)	348
BspTNI	GGTCTC	2 cut(s)	1037, 1187
BsrBI	CCGCTC	1 cut(s)	224
BsrDI	GCAATG	2 cut(s)	462, 858
BsrGI	TGTACA	2 cut(s)	186, 717
BsrI	ACTGG	7 cut(s)	36, 307, 314, 772, 947, 1479, 1515
BssECI	CCNNGG	4 cut(s)	49, 387, 1345, 1346
BssMI	GATC	6 cut(s)	505, 762, 1375, 1419, 1537, 1755
BssSI	CACGAG	1 cut(s)	1278
BssT1I	CCWWGG	1 cut(s)	387
Bst2BI	CACGAG	1 cut(s)	1278
Bst2UI	CCWGG	3 cut(s)	51, 379, 1347
Bst4CI	ACNGT	3 cut(s)	252, 320, 664
Bst6I	CTCTTC	2 cut(s)	1470, 1816
BstAPI	GCANNNNNTGC	1 cut(s)	755
BstAUI	TGTACA	2 cut(s)	186, 717
BstBI	TTCGAA	1 cut(s)	348
BstC8I	GCNNGC	4 cut(s)	244, 1366, 1411, 1763
BstDEI	CTNAG	5 cut(s)	89, 362, 1104, 1256, 1518
BstDSI	CCRYGG	1 cut(s)	387
BstF5I	GGATG	6 cut(s)	111, 420, 931, 1000, 1246, 1717
BstFNI	CGCG	1 cut(s)	640
BstKTI	GATC	6 cut(s)	508, 765, 1378, 1422, 1540, 1758
BstMAI	GTCTC	5 cut(s)	267, 1037, 1051, 1147, 1187
BstMBI	GATC	6 cut(s)	505, 762, 1375, 1419, 1537, 1755
BstMWI	GCNNNNNNNGC	2 cut(s)	755, 1169
BstNI	CCWGG	3 cut(s)	51, 379, 1347
BstNSI	RCATGY	1 cut(s)	1662
BstSCI	CCNGG	4 cut(s)	49, 377, 395, 1345
BstSFI	CTRYAG	1 cut(s)	1078
BstSLI	GKGCMC	1 cut(s)	1692
BstUI	CGCG	1 cut(s)	640
BstV1I	GCAGC	5 cut(s)	1150, 1501, 1573, 1595, 1759
BstV2I	GAAGAC	1 cut(s)	1006
BstX2I	RGATCY	1 cut(s)	1537
BstXI	CCANNNNNNTGG	2 cut(s)	942, 1550
BstYI	RGATCY	1 cut(s)	1537
Bsu15I	ATCGAT	1 cut(s)	353
BsuRI	GGCC	4 cut(s)	35, 54, 968, 1555
BsuTUI	ATCGAT	1 cut(s)	353
BtgI	CCRYGG	1 cut(s)	387
BtgZI	GCGATG	1 cut(s)	587
BtrI	CACGTC	1 cut(s)	277
BtsCI	GGATG	6 cut(s)	111, 420, 931, 1000, 1246, 1717
BtsI	GCAGTG	2 cut(s)	155, 756
BtsIMutI	CAGTG	6 cut(s)	155, 756, 765, 986, 1231, 1486
BveI	ACCTGC	1 cut(s)	1382
Cac8I	GCNNGC	4 cut(s)	244, 1366, 1411, 1763
CaiI	CAGNNNCTG	2 cut(s)	755, 1589
Cfr13I	GGNCC	2 cut(s)	945, 1553
ClaI	ATCGAT	1 cut(s)	353
CseI	GACGC	3 cut(s)	391, 824, 972
Csp6I	GTAC	4 cut(s)	187, 307, 718, 1075
CviQI	GTAC	4 cut(s)	187, 307, 718, 1075
DdeI	CTNAG	5 cut(s)	89, 362, 1104, 1256, 1518
DpnI	GATC	6 cut(s)	507, 764, 1377, 1421, 1539, 1757
DpnII	GATC	6 cut(s)	505, 762, 1375, 1419, 1537, 1755
DraIII	CACNNNGTG	1 cut(s)	771
DrdI	GACNNNNNNGTC	1 cut(s)	1322
DseDI	GACNNNNNNGTC	1 cut(s)	1322
Eam1104I	CTCTTC	2 cut(s)	1470, 1816
EarI	CTCTTC	2 cut(s)	1470, 1816
Ecl136II	GAGCTC	2 cut(s)	1463, 1809
Eco130I	CCWWGG	1 cut(s)	387
Eco147I	AGGCCT	1 cut(s)	54
Eco24I	GRGCYC	2 cut(s)	1465, 1811
Eco31I	GGTCTC	2 cut(s)	1037, 1187
Eco32I	GATATC	1 cut(s)	486
Eco47I	GGWCC	1 cut(s)	945
Eco53kI	GAGCTC	2 cut(s)	1463, 1809
Eco57I	CTGAAG	1 cut(s)	1010
Eco88I	CYCGRG	1 cut(s)	452
EcoICRI	GAGCTC	2 cut(s)	1463, 1809
EcoRII	CCWGG	3 cut(s)	49, 377, 1345
EcoRV	GATATC	1 cut(s)	486
EcoT14I	CCWWGG	1 cut(s)	387
EcoT38I	GRGCYC	2 cut(s)	1465, 1811
ErhI	CCWWGG	1 cut(s)	387
Esp3I	CGTCTC	1 cut(s)	267
FalI	AAGNNNNNCTT	2 cut(s)	1045, 1077
FauI	CCCGC	2 cut(s)	217, 251
FauNDI	CATATG	1 cut(s)	1767
FbaI	TGATCA	1 cut(s)	762
Fnu4HI	GCNGC	7 cut(s)	240, 638, 1164, 1515, 1584, 1587, 1773
FokI	GGATG	6 cut(s)	98, 427, 918, 1007, 1253, 1704
FriOI	GRGCYC	2 cut(s)	1465, 1811
Fsp4HI	GCNGC	7 cut(s)	240, 638, 1164, 1515, 1584, 1587, 1773
FspBI	CTAG	5 cut(s)	68, 522, 708, 801, 1611
GluI	GCNGC	7 cut(s)	240, 638, 1164, 1515, 1584, 1587, 1773
HaeIII	GGCC	4 cut(s)	35, 54, 968, 1555
HapII	CCGG	3 cut(s)	396, 731, 1238
HgaI	GACGC	3 cut(s)	391, 824, 972
HincII	GTYRAC	1 cut(s)	19
HindII	GTYRAC	1 cut(s)	19
HindIII	AAGCTT	1 cut(s)	1407
HpaII	CCGG	3 cut(s)	396, 731, 1238
HphI	GGTGA	1 cut(s)	1303
Hpy166II	GTNNAC	5 cut(s)	19, 41, 187, 189, 1690
Hpy188I	TCNGA	2 cut(s)	1105, 1354
Hpy8I	GTNNAC	5 cut(s)	19, 41, 187, 189, 1690
Hpy99I	CGWCG	3 cut(s)	260, 407, 818
HpyAV	CCTTC	5 cut(s)	162, 604, 985, 1186, 1282
HpyCH4III	ACNGT	3 cut(s)	252, 320, 664
HpyCH4IV	ACGT	2 cut(s)	198, 276
HpyF10VI	GCNNNNNNNGC	2 cut(s)	755, 1169
HpyF3I	CTNAG	5 cut(s)	89, 362, 1104, 1256, 1518
HpySE526I	ACGT	2 cut(s)	198, 276
Ksp22I	TGATCA	1 cut(s)	762
Kzo9I	GATC	6 cut(s)	505, 762, 1375, 1419, 1537, 1755
LguI	GCTCTTC	2 cut(s)	1470, 1816
LmnI	GCTCC	3 cut(s)	1354, 1460, 1806
Lsp1109I	GCAGC	5 cut(s)	1150, 1501, 1573, 1595, 1759
LweI	GCATC	6 cut(s)	345, 531, 717, 940, 1419, 1726
MaeI	CTAG	5 cut(s)	68, 522, 708, 801, 1611
MaeII	ACGT	2 cut(s)	198, 276
MaeIII	GTNAC	6 cut(s)	280, 298, 320, 751, 900, 984
MalI	GATC	6 cut(s)	507, 764, 1377, 1421, 1539, 1757
MbiI	CCGCTC	1 cut(s)	224
MboI	GATC	6 cut(s)	505, 762, 1375, 1419, 1537, 1755
MboII	GAAGA	6 cut(s)	604, 806, 1011, 1457, 1765, 1803
MflI	RGATCY	1 cut(s)	1537
MhlI	GDGCHC	6 cut(s)	1017, 1279, 1465, 1692, 1749, 1811
MluCI	AATT	6 cut(s)	713, 819, 1122, 1371, 1693, 1780
MlyI	GAGTC	6 cut(s)	349, 1094, 1138, 1310, 1393, 1650
MmeI	TCCRAC	4 cut(s)	824, 1332, 1646, 1681
MseI	TTAA	4 cut(s)	6, 1023, 1370, 1819
MslI	CAYNNNNRTG	2 cut(s)	1491, 1722
MspA1I	CMGCKG	1 cut(s)	1586
MspI	CCGG	3 cut(s)	396, 731, 1238
MspR9I	CCNGG	4 cut(s)	51, 379, 397, 1347
Mva1269I	GAATGC	2 cut(s)	481, 853
MvaI	CCWGG	3 cut(s)	51, 379, 1347
MvnI	CGCG	1 cut(s)	640
MwoI	GCNNNNNNNGC	2 cut(s)	755, 1169
NciI	CCSGG	1 cut(s)	397
NcoI	CCATGG	1 cut(s)	387
NdeI	CATATG	1 cut(s)	1767
NdeII	GATC	6 cut(s)	505, 762, 1375, 1419, 1537, 1755
NlaIV	GGNNCC	3 cut(s)	150, 947, 1539
NmuCI	GTSAC	2 cut(s)	751, 984
NspI	RCATGY	1 cut(s)	1662
NspV	TTCGAA	1 cut(s)	348
PasI	CCCWGGG	1 cut(s)	1346
PceI	AGGCCT	1 cut(s)	54
PciSI	GCTCTTC	2 cut(s)	1470, 1816
PctI	GAATGC	2 cut(s)	481, 853
PfeI	GAWTC	4 cut(s)	332, 350, 1037, 1093
PflFI	GACNNNGTC	2 cut(s)	836, 1139
PflMI	CCANNNNNTGG	1 cut(s)	145
PfoI	TCCNGGA	1 cut(s)	377
PkrI	GCNGC	7 cut(s)	241, 639, 1165, 1516, 1585, 1588, 1774
PleI	GAGTC	6 cut(s)	348, 1094, 1137, 1310, 1392, 1649
PpsI	GAGTC	6 cut(s)	348, 1094, 1137, 1310, 1392, 1649
Psp124BI	GAGCTC	2 cut(s)	1465, 1811
Psp6I	CCWGG	3 cut(s)	49, 377, 1345
PspGI	CCWGG	3 cut(s)	49, 377, 1345
PspN4I	GGNNCC	3 cut(s)	150, 947, 1539
PspPI	GGNCC	2 cut(s)	945, 1553
PstI	CTGCAG	1 cut(s)	1082
PstNI	CAGNNNCTG	2 cut(s)	755, 1589
PsuI	RGATCY	1 cut(s)	1537
PsyI	GACNNNGTC	2 cut(s)	836, 1139
PvuII	CAGCTG	1 cut(s)	1586
RsaI	GTAC	4 cut(s)	188, 308, 719, 1076
RsaNI	GTAC	4 cut(s)	187, 307, 718, 1075
RseI	CAYNNNNRTG	2 cut(s)	1491, 1722
SacI	GAGCTC	2 cut(s)	1465, 1811
SapI	GCTCTTC	2 cut(s)	1470, 1816
SaqAI	TTAA	4 cut(s)	6, 1023, 1370, 1819
SatI	GCNGC	7 cut(s)	240, 638, 1164, 1515, 1584, 1587, 1773
Sau3AI	GATC	6 cut(s)	505, 762, 1375, 1419, 1537, 1755
Sau96I	GGNCC	2 cut(s)	945, 1553
SchI	GAGTC	6 cut(s)	349, 1094, 1138, 1310, 1393, 1650
ScrFI	CCNGG	4 cut(s)	51, 379, 397, 1347
SduI	GDGCHC	6 cut(s)	1017, 1279, 1465, 1692, 1749, 1811
SfaNI	GCATC	6 cut(s)	345, 531, 717, 940, 1419, 1726
SfcI	CTRYAG	1 cut(s)	1078
SfuI	TTCGAA	1 cut(s)	348
SinI	GGWCC	1 cut(s)	945
SmiMI	CAYNNNNRTG	2 cut(s)	1491, 1722
SmlI	CTYRAG	3 cut(s)	161, 917, 1748
SmoI	CTYRAG	3 cut(s)	161, 917, 1748
Sse9I	AATT	6 cut(s)	713, 819, 1122, 1371, 1693, 1780
SseBI	AGGCCT	1 cut(s)	54
SsiI	CCGC	5 cut(s)	224, 240, 244, 638, 650
SspI	AATATT	1 cut(s)	1735
SspMI	CTAG	5 cut(s)	68, 522, 708, 801, 1611
SstI	GAGCTC	2 cut(s)	1465, 1811
StuI	AGGCCT	1 cut(s)	54
StyD4I	CCNGG	4 cut(s)	49, 377, 395, 1345
StyI	CCWWGG	1 cut(s)	387
TaaI	ACNGT	3 cut(s)	252, 320, 664
TaiI	ACGT	2 cut(s)	201, 279
TasI	AATT	6 cut(s)	713, 819, 1122, 1371, 1693, 1780
TatI	WGTACW	3 cut(s)	186, 717, 1074
TauI	GCSGC	2 cut(s)	242, 640
TfiI	GAWTC	4 cut(s)	332, 350, 1037, 1093
Tru1I	TTAA	4 cut(s)	6, 1023, 1370, 1819
Tru9I	TTAA	4 cut(s)	6, 1023, 1370, 1819
TscAI	CASTG	6 cut(s)	162, 756, 772, 993, 1231, 1486
TseFI	GTSAC	2 cut(s)	751, 984
TseI	GCWGC	5 cut(s)	1163, 1514, 1583, 1586, 1772
Tsp45I	GTSAC	2 cut(s)	751, 984
TspDTI	ATGAA	4 cut(s)	717, 1475, 1643, 1727
TspRI	CASTG	6 cut(s)	162, 756, 772, 993, 1231, 1486
Tth111I	GACNNNGTC	2 cut(s)	836, 1139
Van91I	CCANNNNNTGG	1 cut(s)	145
VneI	GTGCAC	1 cut(s)	1688
VpaK11BI	GGWCC	1 cut(s)	945
XceI	RCATGY	1 cut(s)	1662
XspI	CTAG	5 cut(s)	68, 522, 708, 801, 1611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.