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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17240 AT3G24506 |
| fragaria_vesca | FvH4_6g31380 |
| malus_domestica | MD02G1047200.v1.1 MD09G1211800.v1.1 |
| prunus_persica | Prupe.3G069800_v2.0.a1 Prupe.7G230800_v2.0.a1 |
| pyrus_communis | pycom02g03940 pycom09g12900 |
| rosa_chinensis | RchiOBHm_Chr2g0090481 RchiOBHm_Chr2g0138141 |
| rosa_laevigata | RLG00000016117 RLG00000019726 |
| rosa_multiflora | Rmu_sc0004514.1_g000023 Rmu_sc0004514.1_g000024 Rmu_sc0004576.1_g000027 |
| rosa_roxburghii | Rroxscaffold_2G00106440 Rroxscaffold_2G00151100 |
| rosa_rugosa | Rorug02G0008400 Rorug02G0349900 |
| rosa_samantha | Rh2AG053800 Rh2AG396500 Rh2BG053300 Rh2BG409900 Rh2CG055400 Rh2CG383000 Rh2DG054000 Rh2DG418200 |
| rosa_wichuraiana | Rw2G004320 Rw2G032420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 465 |
| Acc36I | ACCTGC | 1 cut(s) | 465 |
| AclWI | GGATC | 3 cut(s) | 49, 119, 564 |
| AfaI | GTAC | 1 cut(s) | 334 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 134, 298 |
| AflIII | ACRYGT | 1 cut(s) | 247 |
| AgsI | TTSAA | 3 cut(s) | 80, 362, 386 |
| AjnI | CCWGG | 1 cut(s) | 292 |
| AluBI | AGCT | 3 cut(s) | 210, 389, 501 |
| AluI | AGCT | 3 cut(s) | 210, 389, 501 |
| AlwI | GGATC | 3 cut(s) | 49, 119, 564 |
| Ama87I | CYCGRG | 1 cut(s) | 450 |
| AoxI | GGCC | 1 cut(s) | 252 |
| AvaI | CYCGRG | 1 cut(s) | 450 |
| BbsI | GAAGAC | 2 cut(s) | 39, 452 |
| BceAI | ACGGC | 2 cut(s) | 286, 296 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 262, 296 |
| BciT130I | CCWGG | 1 cut(s) | 294 |
| BfaI | CTAG | 1 cut(s) | 122 |
| BfmI | CTRYAG | 1 cut(s) | 496 |
| BfuAI | ACCTGC | 1 cut(s) | 465 |
| Bme1390I | CCNGG | 1 cut(s) | 294 |
| BmeT110I | CYCGRG | 1 cut(s) | 450 |
| BmrFI | CCNGG | 1 cut(s) | 294 |
| BmrI | ACTGGG | 1 cut(s) | 417 |
| BmuI | ACTGGG | 1 cut(s) | 417 |
| BpiI | GAAGAC | 2 cut(s) | 39, 452 |
| BpuEI | CTTGAG | 1 cut(s) | 72 |
| BsaBI | GATNNNNATC | 1 cut(s) | 525 |
| BsaJI | CCNNGG | 1 cut(s) | 292 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 392, 422 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 134, 298 |
| Bse1I | ACTGG | 3 cut(s) | 62, 102, 423 |
| Bse3DI | GCAATG | 1 cut(s) | 56 |
| Bse8I | GATNNNNATC | 1 cut(s) | 525 |
| BseBI | CCWGG | 1 cut(s) | 294 |
| BseDI | CCNNGG | 1 cut(s) | 292 |
| BseJI | GATNNNNATC | 1 cut(s) | 525 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 134, 298 |
| BseMI | GCAATG | 1 cut(s) | 56 |
| BseMII | CTCAG | 1 cut(s) | 36 |
| BseNI | ACTGG | 3 cut(s) | 62, 102, 423 |
| BseRI | GAGGAG | 1 cut(s) | 416 |
| BshFI | GGCC | 1 cut(s) | 254 |
| BsiHKCI | CYCGRG | 1 cut(s) | 450 |
| BsiSI | CCGG | 1 cut(s) | 135 |
| BslFI | GGGAC | 1 cut(s) | 405 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 134, 298 |
| BsmFI | GGGAC | 1 cut(s) | 405 |
| BsnI | GGCC | 1 cut(s) | 254 |
| BsoBI | CYCGRG | 1 cut(s) | 450 |
| Bsp143I | GATC | 4 cut(s) | 41, 124, 261, 556 |
| BspANI | GGCC | 1 cut(s) | 254 |
| BspCNI | CTCAG | 1 cut(s) | 35 |
| BspMI | ACCTGC | 1 cut(s) | 465 |
| BspPI | GGATC | 3 cut(s) | 49, 119, 564 |
| BsrDI | GCAATG | 1 cut(s) | 56 |
| BsrI | ACTGG | 3 cut(s) | 62, 102, 423 |
| BssECI | CCNNGG | 1 cut(s) | 292 |
| BssMI | GATC | 4 cut(s) | 41, 124, 261, 556 |
| Bst2UI | CCWGG | 1 cut(s) | 294 |
| Bst4CI | ACNGT | 2 cut(s) | 202, 305 |
| Bst6I | CTCTTC | 2 cut(s) | 546, 558 |
| BstDEI | CTNAG | 1 cut(s) | 22 |
| BstKTI | GATC | 4 cut(s) | 44, 127, 264, 559 |
| BstMBI | GATC | 4 cut(s) | 41, 124, 261, 556 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 234 |
| BstNI | CCWGG | 1 cut(s) | 294 |
| BstNSI | RCATGY | 2 cut(s) | 251, 333 |
| BstSCI | CCNGG | 1 cut(s) | 292 |
| BstSFI | CTRYAG | 1 cut(s) | 496 |
| BstV2I | GAAGAC | 2 cut(s) | 39, 452 |
| BstX2I | RGATCY | 1 cut(s) | 124 |
| BstYI | RGATCY | 1 cut(s) | 124 |
| BsuRI | GGCC | 1 cut(s) | 254 |
| BtsI | GCAGTG | 1 cut(s) | 413 |
| BtsIMutI | CAGTG | 2 cut(s) | 69, 413 |
| BveI | ACCTGC | 1 cut(s) | 465 |
| Csp6I | GTAC | 1 cut(s) | 333 |
| CviAII | CATG | 4 cut(s) | 113, 144, 248, 330 |
| CviJI | RGCY | 5 cut(s) | 210, 254, 311, 389, 501 |
| CviKI_1 | RGCY | 5 cut(s) | 210, 254, 311, 389, 501 |
| CviQI | GTAC | 1 cut(s) | 333 |
| DdeI | CTNAG | 1 cut(s) | 22 |
| DpnI | GATC | 4 cut(s) | 43, 126, 263, 558 |
| DpnII | GATC | 4 cut(s) | 41, 124, 261, 556 |
| Eam1104I | CTCTTC | 2 cut(s) | 546, 558 |
| EarI | CTCTTC | 2 cut(s) | 546, 558 |
| Eco88I | CYCGRG | 1 cut(s) | 450 |
| EcoRII | CCWGG | 1 cut(s) | 292 |
| FaeI | CATG | 4 cut(s) | 116, 147, 251, 333 |
| FaqI | GGGAC | 1 cut(s) | 405 |
| FatI | CATG | 4 cut(s) | 112, 143, 247, 329 |
| FspBI | CTAG | 1 cut(s) | 122 |
| HaeIII | GGCC | 1 cut(s) | 254 |
| HapII | CCGG | 1 cut(s) | 135 |
| Hin1II | CATG | 4 cut(s) | 116, 147, 251, 333 |
| HinfI | GANTC | 3 cut(s) | 5, 374, 448 |
| HpaII | CCGG | 1 cut(s) | 135 |
| Hpy166II | GTNNAC | 3 cut(s) | 161, 198, 215 |
| Hpy188I | TCNGA | 3 cut(s) | 12, 25, 232 |
| Hpy188III | TCNNGA | 3 cut(s) | 107, 122, 560 |
| Hpy8I | GTNNAC | 3 cut(s) | 161, 198, 215 |
| HpyAV | CCTTC | 1 cut(s) | 108 |
| HpyCH4III | ACNGT | 2 cut(s) | 202, 305 |
| HpyCH4IV | ACGT | 1 cut(s) | 194 |
| HpyCH4V | TGCA | 2 cut(s) | 429, 474 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 234 |
| HpyF3I | CTNAG | 1 cut(s) | 22 |
| HpySE526I | ACGT | 1 cut(s) | 194 |
| Hsp92II | CATG | 4 cut(s) | 116, 147, 251, 333 |
| Kzo9I | GATC | 4 cut(s) | 41, 124, 261, 556 |
| LmnI | GCTCC | 1 cut(s) | 403 |
| LpnPI | CCDG | 9 cut(s) | 75, 115, 120, 148, 279, 306, 436, 460, 554 |
| MaeI | CTAG | 1 cut(s) | 122 |
| MaeII | ACGT | 1 cut(s) | 194 |
| MaeIII | GTNAC | 1 cut(s) | 64 |
| MalI | GATC | 4 cut(s) | 43, 126, 263, 558 |
| MboI | GATC | 4 cut(s) | 41, 124, 261, 556 |
| MboII | GAAGA | 6 cut(s) | 39, 145, 424, 457, 521, 563 |
| MflI | RGATCY | 1 cut(s) | 124 |
| MluCI | AATT | 1 cut(s) | 75 |
| MlyI | GAGTC | 1 cut(s) | 442 |
| MmeI | TCCRAC | 1 cut(s) | 35 |
| MnlI | CCTC | 8 cut(s) | 31, 61, 265, 390, 394, 446, 547, 559 |
| MseI | TTAA | 1 cut(s) | 239 |
| MspI | CCGG | 1 cut(s) | 135 |
| MspR9I | CCNGG | 1 cut(s) | 294 |
| MvaI | CCWGG | 1 cut(s) | 294 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 234 |
| NdeII | GATC | 4 cut(s) | 41, 124, 261, 556 |
| NlaIII | CATG | 4 cut(s) | 116, 147, 251, 333 |
| NmuCI | GTSAC | 1 cut(s) | 64 |
| NspI | RCATGY | 2 cut(s) | 251, 333 |
| PaeR7I | CTCGAG | 1 cut(s) | 450 |
| PaqCI | CACCTGC | 1 cut(s) | 465 |
| PciI | ACATGT | 1 cut(s) | 247 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 191 |
| PfeI | GAWTC | 2 cut(s) | 5, 374 |
| PleI | GAGTC | 1 cut(s) | 442 |
| PpsI | GAGTC | 1 cut(s) | 442 |
| PscI | ACATGT | 1 cut(s) | 247 |
| Psp6I | CCWGG | 1 cut(s) | 292 |
| PspGI | CCWGG | 1 cut(s) | 292 |
| PspXI | VCTCGAGB | 1 cut(s) | 450 |
| PsuI | RGATCY | 1 cut(s) | 124 |
| RsaI | GTAC | 1 cut(s) | 334 |
| RsaNI | GTAC | 1 cut(s) | 333 |
| SaqAI | TTAA | 1 cut(s) | 239 |
| Sau3AI | GATC | 4 cut(s) | 41, 124, 261, 556 |
| SchI | GAGTC | 1 cut(s) | 442 |
| ScrFI | CCNGG | 1 cut(s) | 294 |
| SetI | ASST | 6 cut(s) | 197, 212, 391, 457, 479, 503 |
| SfcI | CTRYAG | 1 cut(s) | 496 |
| Sfr274I | CTCGAG | 1 cut(s) | 450 |
| SlaI | CTCGAG | 1 cut(s) | 450 |
| SmlI | CTYRAG | 2 cut(s) | 87, 450 |
| SmoI | CTYRAG | 2 cut(s) | 87, 450 |
| Sse9I | AATT | 1 cut(s) | 75 |
| SspMI | CTAG | 1 cut(s) | 122 |
| StyD4I | CCNGG | 1 cut(s) | 292 |
| TaaI | ACNGT | 2 cut(s) | 202, 305 |
| TaiI | ACGT | 1 cut(s) | 197 |
| TaqI | TCGA | 2 cut(s) | 324, 451 |
| TasI | AATT | 1 cut(s) | 75 |
| TatI | WGTACW | 1 cut(s) | 332 |
| TfiI | GAWTC | 2 cut(s) | 5, 374 |
| Tru1I | TTAA | 1 cut(s) | 239 |
| Tru9I | TTAA | 1 cut(s) | 239 |
| TscAI | CASTG | 2 cut(s) | 69, 413 |
| TseFI | GTSAC | 1 cut(s) | 64 |
| Tsp45I | GTSAC | 1 cut(s) | 64 |
| TspDTI | ATGAA | 3 cut(s) | 129, 537, 564 |
| TspGWI | ACGGA | 1 cut(s) | 200 |
| TspRI | CASTG | 2 cut(s) | 69, 413 |
| XbaI | TCTAGA | 1 cut(s) | 121 |
| XceI | RCATGY | 2 cut(s) | 251, 333 |
| XhoI | CTCGAG | 1 cut(s) | 450 |
| XspI | CTAG | 1 cut(s) | 122 |