Ubiquitin-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G32350 |
| fragaria_vesca | FvH4_6g26390 FvH4_6g43480 |
| malus_domestica | MD01G1026100.v1.1 MD09G1246300.v1.1 MD17G1239100.v1.1 |
| prunus_persica | Prupe.3G131400_v2.0.a1 Prupe.3G219500_v2.0.a1 |
| pyrus_communis | pycom01g05440 |
| rosa_chinensis | RchiOBHm_Chr2g0159951 |
| rosa_laevigata | RLG00000018925 RLG00000021187 RLG00000036498 |
| rosa_multiflora | Rmu_sc0000007.1_g000027 Rmu_sc0000909.1_g000026 Rmu_sc0002508.1_g000038 Rmu_sc0012797.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00090130 |
| rosa_rugosa | Rorug02G0270000 Rorug02G0479400 |
| rosa_samantha | Rh2AG322200 Rh2AG546000 Rh2BG330400 Rh2BG559300 Rh2CG310300 Rh2CG529400 Rh2DG349700 Rh2DG568000 Rh5BG512100 Rh5CG535800 |
| rosa_wichuraiana | Rw2G026130 Rw2G045160 Rw5G045470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 154 |
| Acc36I | ACCTGC | 1 cut(s) | 154 |
| AciI | CCGC | 1 cut(s) | 433 |
| AclWI | GGATC | 3 cut(s) | 220, 249, 316 |
| AfaI | GTAC | 1 cut(s) | 516 |
| AflIII | ACRYGT | 1 cut(s) | 233 |
| AgsI | TTSAA | 2 cut(s) | 394, 486 |
| AjiI | CACGTC | 1 cut(s) | 236 |
| AluBI | AGCT | 4 cut(s) | 167, 270, 306, 571 |
| AluI | AGCT | 4 cut(s) | 167, 270, 306, 571 |
| AlwI | GGATC | 3 cut(s) | 220, 249, 316 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 3 cut(s) | 20, 149, 568 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 1 cut(s) | 412 |
| AsuNHI | GCTAGC | 1 cut(s) | 302 |
| BbsI | GAAGAC | 2 cut(s) | 195, 451 |
| BbvI | GCAGC | 3 cut(s) | 7, 136, 580 |
| BccI | CCATC | 1 cut(s) | 136 |
| BfaI | CTAG | 4 cut(s) | 69, 267, 303, 335 |
| BfmI | CTRYAG | 1 cut(s) | 549 |
| BfuAI | ACCTGC | 1 cut(s) | 154 |
| BisI | GCNGC | 3 cut(s) | 21, 150, 569 |
| BlsI | GCNGC | 3 cut(s) | 22, 151, 570 |
| BmgBI | CACGTC | 1 cut(s) | 236 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmrI | ACTGGG | 1 cut(s) | 389 |
| BmsI | GCATC | 1 cut(s) | 289 |
| BmtI | GCTAGC | 1 cut(s) | 306 |
| BmuI | ACTGGG | 1 cut(s) | 389 |
| BpiI | GAAGAC | 2 cut(s) | 195, 451 |
| BpuEI | CTTGAG | 1 cut(s) | 95 |
| BsaBI | GATNNNNATC | 1 cut(s) | 217 |
| BsaJI | CCNNGG | 1 cut(s) | 408 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 498, 528 |
| Bse1I | ACTGG | 1 cut(s) | 384 |
| Bse8I | GATNNNNATC | 1 cut(s) | 217 |
| BseDI | CCNNGG | 1 cut(s) | 408 |
| BseJI | GATNNNNATC | 1 cut(s) | 217 |
| BseMII | CTCAG | 4 cut(s) | 150, 159, 167, 485 |
| BseNI | ACTGG | 1 cut(s) | 384 |
| BseXI | GCAGC | 3 cut(s) | 7, 136, 580 |
| BsgI | GTGCAG | 1 cut(s) | 587 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BslFI | GGGAC | 1 cut(s) | 390 |
| BsmFI | GGGAC | 1 cut(s) | 390 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 3 cut(s) | 212, 241, 321 |
| BspACI | CCGC | 1 cut(s) | 433 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 4 cut(s) | 151, 160, 166, 484 |
| BspMI | ACCTGC | 1 cut(s) | 154 |
| BspOI | GCTAGC | 1 cut(s) | 306 |
| BspPI | GGATC | 3 cut(s) | 220, 249, 316 |
| BsrI | ACTGG | 1 cut(s) | 384 |
| BssECI | CCNNGG | 1 cut(s) | 408 |
| BssMI | GATC | 3 cut(s) | 212, 241, 321 |
| BssT1I | CCWWGG | 1 cut(s) | 408 |
| Bst4CI | ACNGT | 2 cut(s) | 194, 342 |
| Bst6I | CTCTTC | 1 cut(s) | 55 |
| BstC8I | GCNNGC | 1 cut(s) | 304 |
| BstDEI | CTNAG | 6 cut(s) | 8, 153, 159, 168, 471, 572 |
| BstKTI | GATC | 3 cut(s) | 215, 244, 324 |
| BstMBI | GATC | 3 cut(s) | 212, 241, 321 |
| BstSFI | CTRYAG | 1 cut(s) | 549 |
| BstV1I | GCAGC | 3 cut(s) | 7, 136, 580 |
| BstV2I | GAAGAC | 2 cut(s) | 195, 451 |
| BstX2I | RGATCY | 2 cut(s) | 212, 241 |
| BstYI | RGATCY | 2 cut(s) | 212, 241 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtrI | CACGTC | 1 cut(s) | 236 |
| BtsIMutI | CAGTG | 1 cut(s) | 377 |
| BveI | ACCTGC | 1 cut(s) | 154 |
| Cac8I | GCNNGC | 1 cut(s) | 304 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| Csp6I | GTAC | 1 cut(s) | 515 |
| CviJI | RGCY | 8 cut(s) | 5, 115, 167, 270, 306, 452, 561, 571 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 115, 167, 270, 306, 452, 561, 571 |
| CviQI | GTAC | 1 cut(s) | 515 |
| DdeI | CTNAG | 6 cut(s) | 8, 153, 159, 168, 471, 572 |
| DpnI | GATC | 3 cut(s) | 214, 243, 323 |
| DpnII | GATC | 3 cut(s) | 212, 241, 321 |
| Eam1104I | CTCTTC | 1 cut(s) | 55 |
| EarI | CTCTTC | 1 cut(s) | 55 |
| Eco130I | CCWWGG | 1 cut(s) | 408 |
| EcoT14I | CCWWGG | 1 cut(s) | 408 |
| ErhI | CCWWGG | 1 cut(s) | 408 |
| FaiI | YATR | 4 cut(s) | 31, 291, 551, 564 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 436, 468 |
| FaqI | GGGAC | 1 cut(s) | 390 |
| Fnu4HI | GCNGC | 3 cut(s) | 21, 150, 569 |
| Fsp4HI | GCNGC | 3 cut(s) | 21, 150, 569 |
| FspBI | CTAG | 4 cut(s) | 69, 267, 303, 335 |
| GluI | GCNGC | 3 cut(s) | 21, 150, 569 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HincII | GTYRAC | 1 cut(s) | 280 |
| HindII | GTYRAC | 1 cut(s) | 280 |
| HinfI | GANTC | 3 cut(s) | 10, 403, 482 |
| HphI | GGTGA | 1 cut(s) | 412 |
| Hpy166II | GTNNAC | 1 cut(s) | 280 |
| Hpy188I | TCNGA | 4 cut(s) | 140, 160, 443, 474 |
| Hpy188III | TCNNGA | 3 cut(s) | 210, 239, 309 |
| Hpy8I | GTNNAC | 1 cut(s) | 280 |
| HpyAV | CCTTC | 2 cut(s) | 51, 66 |
| HpyCH4III | ACNGT | 2 cut(s) | 194, 342 |
| HpyCH4IV | ACGT | 1 cut(s) | 235 |
| HpyCH4V | TGCA | 1 cut(s) | 568 |
| HpyF3I | CTNAG | 6 cut(s) | 8, 153, 159, 168, 471, 572 |
| HpySE526I | ACGT | 1 cut(s) | 235 |
| Kzo9I | GATC | 3 cut(s) | 212, 241, 321 |
| LmnI | GCTCC | 4 cut(s) | 164, 250, 311, 506 |
| LpnPI | CCDG | 7 cut(s) | 20, 159, 195, 224, 365, 434, 543 |
| Lsp1109I | GCAGC | 3 cut(s) | 7, 136, 580 |
| LweI | GCATC | 1 cut(s) | 289 |
| MaeI | CTAG | 4 cut(s) | 69, 267, 303, 335 |
| MaeII | ACGT | 1 cut(s) | 235 |
| MalI | GATC | 3 cut(s) | 214, 243, 323 |
| MboI | GATC | 3 cut(s) | 212, 241, 321 |
| MboII | GAAGA | 7 cut(s) | 42, 57, 123, 195, 200, 207, 456 |
| MflI | RGATCY | 2 cut(s) | 212, 241 |
| MluCI | AATT | 3 cut(s) | 372, 543, 583 |
| MlyI | GAGTC | 2 cut(s) | 19, 412 |
| MmeI | TCCRAC | 1 cut(s) | 155 |
| MnlI | CCTC | 7 cut(s) | 117, 154, 178, 271, 278, 468, 537 |
| MseI | TTAA | 5 cut(s) | 180, 416, 458, 582, 586 |
| NdeII | GATC | 3 cut(s) | 212, 241, 321 |
| NheI | GCTAGC | 1 cut(s) | 302 |
| PacI | TTAATTAA | 1 cut(s) | 586 |
| PaqCI | CACCTGC | 1 cut(s) | 154 |
| PfeI | GAWTC | 1 cut(s) | 482 |
| PkrI | GCNGC | 3 cut(s) | 22, 151, 570 |
| PleI | GAGTC | 2 cut(s) | 18, 411 |
| PpsI | GAGTC | 2 cut(s) | 18, 411 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| PsuI | RGATCY | 2 cut(s) | 212, 241 |
| RsaI | GTAC | 1 cut(s) | 516 |
| RsaNI | GTAC | 1 cut(s) | 515 |
| SaqAI | TTAA | 5 cut(s) | 180, 416, 458, 582, 586 |
| SatI | GCNGC | 3 cut(s) | 21, 150, 569 |
| Sau3AI | GATC | 3 cut(s) | 212, 241, 321 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| SchI | GAGTC | 2 cut(s) | 19, 412 |
| SfaNI | GCATC | 1 cut(s) | 289 |
| SfcI | CTRYAG | 1 cut(s) | 549 |
| SmlI | CTYRAG | 1 cut(s) | 110 |
| SmoI | CTYRAG | 1 cut(s) | 110 |
| Sse9I | AATT | 3 cut(s) | 372, 543, 583 |
| SsiI | CCGC | 1 cut(s) | 433 |
| SspI | AATATT | 1 cut(s) | 537 |
| SspMI | CTAG | 4 cut(s) | 69, 267, 303, 335 |
| StyI | CCWWGG | 1 cut(s) | 408 |
| TaaI | ACNGT | 2 cut(s) | 194, 342 |
| TaiI | ACGT | 1 cut(s) | 238 |
| TasI | AATT | 3 cut(s) | 372, 543, 583 |
| TatI | WGTACW | 1 cut(s) | 514 |
| TfiI | GAWTC | 1 cut(s) | 482 |
| Tru1I | TTAA | 5 cut(s) | 180, 416, 458, 582, 586 |
| Tru9I | TTAA | 5 cut(s) | 180, 416, 458, 582, 586 |
| TscAI | CASTG | 1 cut(s) | 384 |
| TseI | GCWGC | 3 cut(s) | 20, 149, 568 |
| TspDTI | ATGAA | 4 cut(s) | 69, 195, 207, 477 |
| TspGWI | ACGGA | 2 cut(s) | 297, 314 |
| TspRI | CASTG | 1 cut(s) | 384 |
| XspI | CTAG | 4 cut(s) | 69, 267, 303, 335 |