Ubiquitin-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G32350 |
| fragaria_vesca | FvH4_6g26390 FvH4_6g43480 |
| malus_domestica | MD01G1026100.v1.1 MD09G1246300.v1.1 MD17G1239100.v1.1 |
| prunus_persica | Prupe.3G131400_v2.0.a1 Prupe.3G219500_v2.0.a1 |
| pyrus_communis | pycom01g05440 |
| rosa_chinensis | RchiOBHm_Chr2g0159951 |
| rosa_laevigata | RLG00000018925 RLG00000021187 RLG00000036498 |
| rosa_multiflora | Rmu_sc0000007.1_g000027 Rmu_sc0000909.1_g000026 Rmu_sc0002508.1_g000038 Rmu_sc0012797.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00090130 |
| rosa_rugosa | Rorug02G0270000 Rorug02G0479400 |
| rosa_samantha | Rh2AG322200 Rh2AG546000 Rh2BG330400 Rh2BG559300 Rh2CG310300 Rh2CG529400 Rh2DG349700 Rh2DG568000 Rh5BG512100 Rh5CG535800 |
| rosa_wichuraiana | Rw2G026130 Rw2G045160 Rw5G045470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 35, 440, 620 |
| AcuI | CTGAAG | 2 cut(s) | 210, 258 |
| AfaI | GTAC | 3 cut(s) | 196, 355, 522 |
| AgsI | TTSAA | 3 cut(s) | 74, 565, 579 |
| AjnI | CCWGG | 1 cut(s) | 23 |
| AluBI | AGCT | 1 cut(s) | 116 |
| AluI | AGCT | 1 cut(s) | 116 |
| Alw26I | GTCTC | 3 cut(s) | 305, 480, 485 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 137 |
| Ama87I | CYCGRG | 1 cut(s) | 532 |
| ApeKI | GCWGC | 1 cut(s) | 113 |
| ApoI | RAATTY | 3 cut(s) | 35, 440, 620 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 66, 408 |
| AspS9I | GGNCC | 1 cut(s) | 663 |
| AsuHPI | GGTGA | 2 cut(s) | 31, 202 |
| AvaI | CYCGRG | 1 cut(s) | 532 |
| AvaII | GGWCC | 1 cut(s) | 663 |
| BbsI | GAAGAC | 1 cut(s) | 177 |
| BbvI | GCAGC | 1 cut(s) | 125 |
| BccI | CCATC | 3 cut(s) | 149, 221, 701 |
| BciT130I | CCWGG | 1 cut(s) | 25 |
| BciVI | GTATCC | 1 cut(s) | 746 |
| BcoDI | GTCTC | 3 cut(s) | 305, 480, 485 |
| BfaI | CTAG | 1 cut(s) | 161 |
| BfuI | GTATCC | 1 cut(s) | 746 |
| BisI | GCNGC | 1 cut(s) | 114 |
| BlsI | GCNGC | 1 cut(s) | 115 |
| Bme1390I | CCNGG | 1 cut(s) | 25 |
| Bme18I | GGWCC | 1 cut(s) | 663 |
| BmeT110I | CYCGRG | 1 cut(s) | 532 |
| BmgT120I | GGNCC | 1 cut(s) | 663 |
| BmiI | GGNNCC | 1 cut(s) | 228 |
| BmrFI | CCNGG | 1 cut(s) | 25 |
| BmsI | GCATC | 2 cut(s) | 114, 295 |
| BpiI | GAAGAC | 1 cut(s) | 177 |
| BpuEI | CTTGAG | 3 cut(s) | 449, 616, 671 |
| BsaJI | CCNNGG | 1 cut(s) | 24 |
| Bse1I | ACTGG | 1 cut(s) | 241 |
| BseBI | CCWGG | 1 cut(s) | 25 |
| BseDI | CCNNGG | 1 cut(s) | 24 |
| BseGI | GGATG | 1 cut(s) | 105 |
| BseMII | CTCAG | 3 cut(s) | 263, 438, 496 |
| BseNI | ACTGG | 1 cut(s) | 241 |
| BseXI | GCAGC | 1 cut(s) | 125 |
| BseYI | CCCAGC | 1 cut(s) | 109 |
| BsiHKCI | CYCGRG | 1 cut(s) | 532 |
| BslFI | GGGAC | 2 cut(s) | 42, 748 |
| BsmAI | GTCTC | 3 cut(s) | 305, 480, 485 |
| BsmFI | GGGAC | 2 cut(s) | 42, 748 |
| BsoBI | CYCGRG | 1 cut(s) | 532 |
| Bsp143I | GATC | 2 cut(s) | 360, 450 |
| BspCNI | CTCAG | 3 cut(s) | 262, 439, 495 |
| BspLI | GGNNCC | 1 cut(s) | 228 |
| BsrI | ACTGG | 1 cut(s) | 241 |
| BssECI | CCNNGG | 1 cut(s) | 24 |
| BssMI | GATC | 2 cut(s) | 360, 450 |
| Bst2UI | CCWGG | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 4 cut(s) | 316, 353, 586, 739 |
| Bst6I | CTCTTC | 1 cut(s) | 383 |
| BstDEI | CTNAG | 3 cut(s) | 249, 447, 482 |
| BstF5I | GGATG | 1 cut(s) | 105 |
| BstKTI | GATC | 2 cut(s) | 363, 453 |
| BstMAI | GTCTC | 3 cut(s) | 305, 480, 485 |
| BstMBI | GATC | 2 cut(s) | 360, 450 |
| BstNI | CCWGG | 1 cut(s) | 25 |
| BstSCI | CCNGG | 1 cut(s) | 23 |
| BstV1I | GCAGC | 1 cut(s) | 125 |
| BstV2I | GAAGAC | 1 cut(s) | 177 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 49 |
| BsuI | GTATCC | 1 cut(s) | 746 |
| BtsCI | GGATG | 1 cut(s) | 105 |
| BtsI | GCAGTG | 1 cut(s) | 754 |
| BtsIMutI | CAGTG | 2 cut(s) | 186, 754 |
| CaiI | CAGNNNCTG | 1 cut(s) | 137 |
| Cfr13I | GGNCC | 1 cut(s) | 663 |
| Csp6I | GTAC | 3 cut(s) | 195, 354, 521 |
| CviAII | CATG | 7 cut(s) | 32, 166, 223, 233, 472, 667, 695 |
| CviJI | RGCY | 4 cut(s) | 116, 324, 492, 684 |
| CviKI_1 | RGCY | 4 cut(s) | 116, 324, 492, 684 |
| CviQI | GTAC | 3 cut(s) | 195, 354, 521 |
| DdeI | CTNAG | 3 cut(s) | 249, 447, 482 |
| DpnI | GATC | 2 cut(s) | 362, 452 |
| DpnII | GATC | 2 cut(s) | 360, 450 |
| DraI | TTTAAA | 1 cut(s) | 730 |
| Eam1104I | CTCTTC | 1 cut(s) | 383 |
| EarI | CTCTTC | 1 cut(s) | 383 |
| Eco47I | GGWCC | 1 cut(s) | 663 |
| Eco57I | CTGAAG | 2 cut(s) | 210, 258 |
| Eco88I | CYCGRG | 1 cut(s) | 532 |
| EcoRI | GAATTC | 1 cut(s) | 35 |
| EcoRII | CCWGG | 1 cut(s) | 23 |
| EcoT22I | ATGCAT | 1 cut(s) | 224 |
| FaeI | CATG | 7 cut(s) | 35, 169, 226, 236, 475, 670, 698 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 544, 576 |
| FaqI | GGGAC | 2 cut(s) | 42, 748 |
| FatI | CATG | 7 cut(s) | 31, 165, 222, 232, 471, 666, 694 |
| Fnu4HI | GCNGC | 1 cut(s) | 114 |
| FokI | GGATG | 1 cut(s) | 92 |
| Fsp4HI | GCNGC | 1 cut(s) | 114 |
| FspBI | CTAG | 1 cut(s) | 161 |
| GluI | GCNGC | 1 cut(s) | 114 |
| GsaI | CCCAGC | 1 cut(s) | 113 |
| Hin1II | CATG | 7 cut(s) | 35, 169, 226, 236, 475, 670, 698 |
| HinfI | GANTC | 4 cut(s) | 6, 253, 575, 713 |
| HphI | GGTGA | 2 cut(s) | 31, 202 |
| Hpy166II | GTNNAC | 4 cut(s) | 238, 246, 356, 539 |
| Hpy188I | TCNGA | 7 cut(s) | 57, 139, 252, 258, 305, 448, 485 |
| Hpy188III | TCNNGA | 4 cut(s) | 71, 387, 466, 501 |
| Hpy8I | GTNNAC | 4 cut(s) | 238, 246, 356, 539 |
| HpyAV | CCTTC | 2 cut(s) | 79, 185 |
| HpyCH4III | ACNGT | 4 cut(s) | 316, 353, 586, 739 |
| HpyCH4V | TGCA | 1 cut(s) | 222 |
| HpyF3I | CTNAG | 3 cut(s) | 249, 447, 482 |
| Hsp92II | CATG | 7 cut(s) | 35, 169, 226, 236, 475, 670, 698 |
| Kzo9I | GATC | 2 cut(s) | 360, 450 |
| LpnPI | CCDG | 8 cut(s) | 10, 37, 78, 123, 254, 372, 514, 642 |
| Lsp1109I | GCAGC | 1 cut(s) | 125 |
| LweI | GCATC | 2 cut(s) | 114, 295 |
| MaeI | CTAG | 1 cut(s) | 161 |
| MaeIII | GTNAC | 4 cut(s) | 184, 372, 603, 671 |
| MalI | GATC | 2 cut(s) | 362, 452 |
| MboI | GATC | 2 cut(s) | 360, 450 |
| MboII | GAAGA | 9 cut(s) | 164, 182, 264, 370, 413, 416, 516, 617, 716 |
| MfeI | CAATTG | 2 cut(s) | 180, 676 |
| MlyI | GAGTC | 1 cut(s) | 15 |
| MmeI | TCCRAC | 1 cut(s) | 378 |
| Mph1103I | ATGCAT | 1 cut(s) | 224 |
| MroXI | GAANNNNTTC | 2 cut(s) | 66, 408 |
| MseI | TTAA | 4 cut(s) | 419, 543, 588, 729 |
| MslI | CAYNNNNRTG | 1 cut(s) | 47 |
| MspR9I | CCNGG | 1 cut(s) | 25 |
| MunI | CAATTG | 2 cut(s) | 180, 676 |
| MvaI | CCWGG | 1 cut(s) | 25 |
| NdeII | GATC | 2 cut(s) | 360, 450 |
| NlaIII | CATG | 7 cut(s) | 35, 169, 226, 236, 475, 670, 698 |
| NlaIV | GGNNCC | 1 cut(s) | 228 |
| NmuCI | GTSAC | 3 cut(s) | 184, 372, 671 |
| NsiI | ATGCAT | 1 cut(s) | 224 |
| PaeR7I | CTCGAG | 1 cut(s) | 532 |
| PdmI | GAANNNNTTC | 2 cut(s) | 66, 408 |
| PfeI | GAWTC | 3 cut(s) | 253, 575, 713 |
| PkrI | GCNGC | 1 cut(s) | 115 |
| PleI | GAGTC | 1 cut(s) | 14 |
| PpsI | GAGTC | 1 cut(s) | 14 |
| Psp6I | CCWGG | 1 cut(s) | 23 |
| PspFI | CCCAGC | 1 cut(s) | 109 |
| PspGI | CCWGG | 1 cut(s) | 23 |
| PspN4I | GGNNCC | 1 cut(s) | 228 |
| PspPI | GGNCC | 1 cut(s) | 663 |
| PspXI | VCTCGAGB | 1 cut(s) | 532 |
| PstNI | CAGNNNCTG | 1 cut(s) | 137 |
| RsaI | GTAC | 3 cut(s) | 196, 355, 522 |
| RsaNI | GTAC | 3 cut(s) | 195, 354, 521 |
| RseI | CAYNNNNRTG | 1 cut(s) | 47 |
| SaqAI | TTAA | 4 cut(s) | 419, 543, 588, 729 |
| SatI | GCNGC | 1 cut(s) | 114 |
| Sau3AI | GATC | 2 cut(s) | 360, 450 |
| Sau96I | GGNCC | 1 cut(s) | 663 |
| SchI | GAGTC | 1 cut(s) | 15 |
| ScrFI | CCNGG | 1 cut(s) | 25 |
| SetI | ASST | 9 cut(s) | 26, 51, 67, 90, 118, 196, 210, 232, 300 |
| SfaNI | GCATC | 2 cut(s) | 114, 295 |
| Sfr274I | CTCGAG | 1 cut(s) | 532 |
| SinI | GGWCC | 1 cut(s) | 663 |
| SlaI | CTCGAG | 1 cut(s) | 532 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 47 |
| SmlI | CTYRAG | 4 cut(s) | 464, 532, 595, 686 |
| SmoI | CTYRAG | 4 cut(s) | 464, 532, 595, 686 |
| SspMI | CTAG | 1 cut(s) | 161 |
| StyD4I | CCNGG | 1 cut(s) | 23 |
| TaaI | ACNGT | 4 cut(s) | 316, 353, 586, 739 |
| TaqI | TCGA | 1 cut(s) | 533 |
| TfiI | GAWTC | 3 cut(s) | 253, 575, 713 |
| Tru1I | TTAA | 4 cut(s) | 419, 543, 588, 729 |
| Tru9I | TTAA | 4 cut(s) | 419, 543, 588, 729 |
| TscAI | CASTG | 2 cut(s) | 193, 754 |
| TseFI | GTSAC | 3 cut(s) | 184, 372, 671 |
| TseI | GCWGC | 1 cut(s) | 113 |
| Tsp45I | GTSAC | 3 cut(s) | 184, 372, 671 |
| TspDTI | ATGAA | 3 cut(s) | 48, 488, 637 |
| TspGWI | ACGGA | 1 cut(s) | 486 |
| TspRI | CASTG | 2 cut(s) | 193, 754 |
| VpaK11BI | GGWCC | 1 cut(s) | 663 |
| XapI | RAATTY | 3 cut(s) | 35, 440, 620 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 220 |
| XhoI | CTCGAG | 1 cut(s) | 532 |
| XmnI | GAANNNNTTC | 2 cut(s) | 66, 408 |
| XspI | CTAG | 1 cut(s) | 161 |
| Zsp2I | ATGCAT | 1 cut(s) | 224 |