Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004845

Physical Location & Seq

Genomic Coordinates Forward (+)

61141225 .. 61148054

Gene Structure 6830 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0481000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGTCCAGAAAGCTCTTGAAGTTGAGCAATGGCTTCTCTTCGCCCGCTGAGATTTTGTTCTACCACTCCCCATTTTTTCAAGATCATTCTGGAGGACACTTCTCGACACAAACTTGTGTAGATGATATGTCGGTAGAGAAAGATGGCAGAGTCCCTGGAGGCTTATCTGGCACTCAAAGGTTCCTAAAGAAAACATCTCACAAGTCTTTGCCATCGGAGTTTTCCAGAAGACATCTCATTAAGCAGCCTGCAAATAACATTACCCTTAGAGTTTTGGATGGAAGAATATGGTCTGTTGAATTCACATATACTAAAGAGAAAGCCCAATTCCAGGGTGGCTGGTTGACATTTGTGAAGGACAATAATTTGGAAGTTGGCGATAAAGTTCCGAACAAATTTGTGATGAAATATGGTAAAGATCTATTAAATTCAGTTTATCTAAAGCTTCCGAGTGGTTCTGAATGGGAAGTGGAACTGACAAGATGCAGAGATAAGATTTGGTTTGAGAAGGGTTGGCCAGAGTTCTCTATGTTTTGTTCACTAGACTACGGGAGTTTCCTGGTTTTTCGATATGAAGGGAATTCTCATTTCCATGTTTGCATATTTGATATGAGTGCCACCGAGATTGATTATCCTATTACAATGCCCAAGATTGAAGAAGCCGTTGAAGATGATGATTTATCTATTGAAATCTTGGAGGATTTTCAACCCAGCCCCAAAGCAAGAAAGCAGTCTCCATTACCACGTCCTCCTTACAAGAAAATGAGAACAAGTTTGAGCAGTAATGCAAATATGAATTTTGATAGGGAGAACACTCAACCTTGTGACATGCTTGAGAAGCCAATCACAAAGGAGGATTCACACTGCACTAAATTAGAAGTGAAAAGTATGGAAAATAAAGAGAAAGATGGCGGAGTCACTGGAGGCTCTTGTGGCACTCAAACGTTCCTTATACCAACATGTCACCAGGTTCTTGGCAGCGCTCTAGCTCTTCGTAGAGCTTATGATTTCAAAACTGAAAACCCTTCATTCATCGTATCCATGCGGCCCTCGGATATACAAAGTTCTTTGGCTTTGCCATTGAAGTTTGCCAAACGACATCTTATTAAGCAGCCTGATAGTAACATCAATCTTCAAGTTTTGGATGGAAGCACATGGTCTGTTGAATTCAAATATAGTGAAGAAGAAGAAGCTCGATTCCAGCATGGCTGGTTGACGTTTGTGAAGGACAATAATTTGGAACTTGGTGATGTGTGTGTCTTTGTCTTGATTAAGGACATTAAACTTTTATTAAGAGTTGTCTTTTTCCGCACTTCAGAAGCTATAAATTGGTTTTTGTATGGGGGAAATAGTTTTCCTACCAAAAGAGATGGTGGAAGCTCTTCTAGTTCTCAAAGATTCCTAAACCGAACACATCATGAGGCTCTTGGGATGATGAAGCAATTGACTGCAACTGAGAAAGCTAATGCCTTCAAGTCTGATAAACCTTCTTTTAGGATTGTCATGCAGCCCTCTTCTATCCATTATGATATGATGTCTTTACCAAATGAATTTTCCAAGAGATATCTTATGAAGCTGCCTGCTGGCATTGCCATCCTTCAAGTTTCGGATGGAAGAACTTGGTCTGTTAAATTCAAGTATGATCATGCAAACTCAAGGGCTCGACTCCTGAAGGGTTGGTCAGCTTTTGTGAGGGACAATAATTTGAAAGTTGGTGATGTGTGTGTCTTTACCCTAATTAACTGCATCGAACTTTTATTTGAAGTTGCCTTTTTCCCCACAGAAAAGTCCACAAATTTCCCATCGCCAACAGGTCATGGCAGAGGAGGAATTGTTCAAGTTGAAAAAACAAGAAGCCCTGCAGTTAAAATTGAACCTGAATGCAACATGGATTGTGAAATTGGTCCCTCTTGCTCTCTTGAAATTGGCAACAAAATGTCAAAAATTAGTGTGCAGGTTACTCAAAGGCCTTCTTCATCTTTGAGGGCTTCAGATGTTAATCTTGAAGTTGCCAACAAGTTTTCCTCGAAGAATCCCTTCTTCAAAATCACTATCGGGTCAGGCCATTCTGTGCATGTCCCAGTTAAATTTTCTAGCAGTTTCATCAAACAGAAGAAGCAAACAGTGATGCTTCAGGTCAAAGATACATTCTGGCCTGTGAATTTAATTTCTAGTAAGCCGTGTTCAACTTCAATTTGTGGCGGTTGGGCTGCATTTGCGAAGGAAAATTGTTTAAGAGAAGGAGATGTTTGCATATTTGAGCTCATAGAGATGAATGACATTGTACTGAAAGTTCACATATTTAGATATTGCTTAGAAGGGGAAAGTAATGTCCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0009506 GO:0009888 GO:0009893 GO:0009966 GO:0009968 GO:0010449 GO:0010468 GO:0010604 GO:0010628 GO:0010646 GO:0010648 GO:0010817 GO:0016020 GO:0019222 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0032501 GO:0032502 GO:0032879 GO:0035266 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048507 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051049 GO:0055044 GO:0060255 GO:0065007 GO:0065008 GO:0071944 GO:0080036 GO:0080037 GO:0099402 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko00590 ko01100 map00590 map01100

Pfam Domains

Protein Families

Protein Analysis

779

Amino Acids

88.23

Weight (kDa)

8.64

Isoelectric Point (pI)

50.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	67 - 128	2.1e-10	B3 DNA binding domain
B3	PF02362	129 - 203	3.2e-11	B3 DNA binding domain
B3	PF02362	346 - 438	5e-16	B3 DNA binding domain
B3	PF02362	500 - 581	7.3e-18	B3 DNA binding domain
B3	PF02362	686 - 769	4e-12	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004845)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g25540 FvH4_2g25540 FvH4_2g25540 FvH4_2g25540 FvH4_2g25540 FvH4_2g25540 FvH4_2g25540 FvH4_2g25540 FvH4_2g25540 FvH4_2g25540
malus_domestica	MD03G1286200.v1.1 MD11G1306100.v1.1
prunus_persica	Prupe.8G259700_v2.0.a1 Prupe.8G259700_v2.0.a1
pyrus_communis	pycom11g26790
rosa_chinensis	RchiOBHm_Chr6g0293761 RchiOBHm_Chr6g0293771
rosa_laevigata	RLG00000011925 RLG00000011926
rosa_multiflora	Rmu_co8177046.1_g000001 Rmu_sc0005641.1_g000009
rosa_roxburghii	Rroxscaffold_7G00173920
rosa_rugosa	Rorug01G0286200 Rorug02G0351600 Rorug02G0481000 Rorug06G0237900
rosa_samantha	Rh6CG365100 Rh6DG346200 Rh6DG351900
rosa_wichuraiana	Rw6G030540 Rw6G030550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1945
AciI	CCGC	5 cut(s)	45, 912, 1045, 1309, 2202
AclI	AACGTT	1 cut(s)	944
AcoI	YGGCCR	1 cut(s)	515
AcuI	CTGAAG	4 cut(s)	1299, 1691, 1974, 2117
AfaI	GTAC	1 cut(s)	2286
AfeI	AGCGCT	1 cut(s)	982
AfiI	CCNNNNNNNGG	1 cut(s)	331
AflIII	ACRYGT	1 cut(s)	959
AjiI	CACGTC	1 cut(s)	746
AjnI	CCWGG	4 cut(s)	154, 330, 558, 966
AjuI	GAANNNNNNNTTGG	2 cut(s)	1537, 1569
AloI	GAACNNNNNNTCC	2 cut(s)	1818, 1850
Alw21I	GWGCWC	1 cut(s)	2265
Alw26I	GTCTC	1 cut(s)	738
Aor51HI	AGCGCT	1 cut(s)	982
AoxI	GGCC	5 cut(s)	515, 1046, 1967, 2062, 2153
ApeKI	GCWGC	6 cut(s)	244, 978, 1111, 1507, 1576, 2210
Asp700I	GAANNNNTTC	2 cut(s)	1381, 2036
AspLEI	GCGC	1 cut(s)	983
AspS9I	GGNCC	2 cut(s)	1047, 1904
AsuHPI	GGTGA	3 cut(s)	956, 1259, 1727
AvaII	GGWCC	1 cut(s)	1904
BalI	TGGCCA	1 cut(s)	517
BanII	GRGCYC	2 cut(s)	1663, 2265
BbsI	GAAGAC	1 cut(s)	235
Bbv12I	GWGCWC	1 cut(s)	2265
BbvI	GCAGC	6 cut(s)	256, 990, 1123, 1519, 1563, 2197
BccI	CCATC	9 cut(s)	137, 220, 272, 902, 1139, 1364, 1601, 1604, 1810
BceAI	ACGGC	2 cut(s)	647, 2164
BciT130I	CCWGG	4 cut(s)	156, 332, 560, 968
BciVI	GTATCC	1 cut(s)	1048
BclI	TGATCA	1 cut(s)	1642
BcoDI	GTCTC	1 cut(s)	738
BfaI	CTAG	5 cut(s)	542, 986, 1386, 2094, 2172
BfmI	CTRYAG	1 cut(s)	1860
BfoI	RGCGCY	1 cut(s)	984
BfuAI	ACCTGC	1 cut(s)	1945
BfuI	GTATCC	1 cut(s)	1048
BglII	AGATCT	1 cut(s)	418
BisI	GCNGC	7 cut(s)	245, 979, 1046, 1112, 1508, 1577, 2211
BlsI	GCNGC	7 cut(s)	246, 980, 1047, 1113, 1509, 1578, 2212
Bme1390I	CCNGG	4 cut(s)	156, 332, 560, 968
Bme18I	GGWCC	1 cut(s)	1904
BmgBI	CACGTC	1 cut(s)	746
BmgT120I	GGNCC	2 cut(s)	1047, 1904
BmiI	GGNNCC	2 cut(s)	182, 1906
BmrFI	CCNGG	4 cut(s)	156, 332, 560, 968
BmrI	ACTGGG	1 cut(s)	2075
BmsI	GCATC	3 cut(s)	473, 1755, 2118
BmuI	ACTGGG	1 cut(s)	2075
BpiI	GAAGAC	1 cut(s)	235
BpmI	CTGGAG	3 cut(s)	111, 177, 942
BpuEI	CTTGAG	2 cut(s)	854, 1639
BsaBI	GATNNNNATC	1 cut(s)	1998
BsaJI	CCNNGG	3 cut(s)	154, 331, 1050
BsaXI	ACNNNNNCTCC	2 cut(s)	1818, 1848
Bsc4I	CCNNNNNNNGG	1 cut(s)	331
Bse1I	ACTGG	2 cut(s)	925, 2081
Bse3DI	GCAATG	2 cut(s)	34, 1587
Bse8I	GATNNNNATC	1 cut(s)	1998
BseBI	CCWGG	4 cut(s)	156, 332, 560, 968
BseDI	CCNNGG	3 cut(s)	154, 331, 1050
BseGI	GGATG	5 cut(s)	283, 1150, 1437, 1593, 1615
BseJI	GATNNNNATC	1 cut(s)	1998
BseLI	CCNNNNNNNGG	1 cut(s)	331
BseMI	GCAATG	2 cut(s)	34, 1587
BseMII	CTCAG	2 cut(s)	39, 1446
BseNI	ACTGG	2 cut(s)	925, 2081
BseRI	GAGGAG	1 cut(s)	1839
BseXI	GCAGC	6 cut(s)	256, 990, 1123, 1519, 1563, 2197
BseYI	CCCAGC	1 cut(s)	710
BsgI	GTGCAG	2 cut(s)	850, 1973
BshFI	GGCC	5 cut(s)	517, 1048, 1969, 2064, 2155
BsiHKAI	GWGCWC	1 cut(s)	2265
BslFI	GGGAC	4 cut(s)	137, 1709, 1890, 2063
BslI	CCNNNNNNNGG	1 cut(s)	331
BsmAI	GTCTC	1 cut(s)	738
BsmFI	GGGAC	4 cut(s)	137, 1709, 1890, 2063
BsmI	GAATGC	1 cut(s)	1886
BsnI	GGCC	5 cut(s)	517, 1048, 1969, 2064, 2155
Bsp1286I	GDGCHC	2 cut(s)	1663, 2265
Bsp143I	GATC	3 cut(s)	82, 418, 1642
BspACI	CCGC	5 cut(s)	45, 912, 1045, 1309, 2202
BspANI	GGCC	5 cut(s)	517, 1048, 1969, 2064, 2155
BspCNI	CTCAG	2 cut(s)	40, 1447
BspHI	TCATGA	1 cut(s)	1417
BspLI	GGNNCC	2 cut(s)	182, 1906
BspMAI	CTGCAG	1 cut(s)	1864
BspMI	ACCTGC	1 cut(s)	1945
BspQI	GCTCTTC	2 cut(s)	996, 1387
BsrDI	GCAATG	2 cut(s)	34, 1587
BsrI	ACTGG	2 cut(s)	925, 2081
BssECI	CCNNGG	3 cut(s)	154, 331, 1050
BssMI	GATC	3 cut(s)	82, 418, 1642
Bst2UI	CCWGG	4 cut(s)	156, 332, 560, 968
Bst4CI	ACNGT	1 cut(s)	2125
Bst6I	CTCTTC	4 cut(s)	43, 996, 1387, 1519
BstC8I	GCNNGC	4 cut(s)	45, 249, 1581, 1585
BstDEI	CTNAG	4 cut(s)	48, 266, 1455, 2314
BstF5I	GGATG	5 cut(s)	283, 1150, 1437, 1593, 1615
BstH2I	RGCGCY	1 cut(s)	984
BstHHI	GCGC	1 cut(s)	983
BstKTI	GATC	3 cut(s)	85, 421, 1645
BstMAI	GTCTC	1 cut(s)	738
BstMBI	GATC	3 cut(s)	82, 418, 1642
BstMWI	GCNNNNNNNGC	5 cut(s)	168, 838, 933, 1589, 2216
BstNI	CCWGG	4 cut(s)	156, 332, 560, 968
BstNSI	RCATGY	3 cut(s)	832, 963, 2078
BstSCI	CCNGG	4 cut(s)	154, 330, 558, 966
BstSFI	CTRYAG	1 cut(s)	1860
BstV1I	GCAGC	6 cut(s)	256, 990, 1123, 1519, 1563, 2197
BstV2I	GAAGAC	1 cut(s)	235
BstX2I	RGATCY	1 cut(s)	418
BstXI	CCANNNNNNTGG	1 cut(s)	974
BstYI	RGATCY	1 cut(s)	418
BsuI	GTATCC	1 cut(s)	1048
BsuRI	GGCC	5 cut(s)	517, 1048, 1969, 2064, 2155
BtgZI	GCGATG	1 cut(s)	1788
BtrI	CACGTC	1 cut(s)	746
BtsCI	GGATG	5 cut(s)	283, 1150, 1437, 1593, 1615
BtsI	GCAGTG	1 cut(s)	862
BtsIMutI	CAGTG	3 cut(s)	862, 918, 2130
BveI	ACCTGC	1 cut(s)	1945
Cac8I	GCNNGC	4 cut(s)	45, 249, 1581, 1585
CciI	TCATGA	1 cut(s)	1417
CfoI	GCGC	1 cut(s)	983
Cfr13I	GGNCC	2 cut(s)	1047, 1904
CsiI	ACCWGGT	1 cut(s)	966
Csp6I	GTAC	1 cut(s)	2285
CspCI	CAANNNNNGTGG	2 cut(s)	607, 642
CviQI	GTAC	1 cut(s)	2285
DdeI	CTNAG	4 cut(s)	48, 266, 1455, 2314
DpnI	GATC	3 cut(s)	84, 420, 1644
DpnII	GATC	3 cut(s)	82, 418, 1642
EaeI	YGGCCR	1 cut(s)	515
Eam1104I	CTCTTC	4 cut(s)	43, 996, 1387, 1519
EarI	CTCTTC	4 cut(s)	43, 996, 1387, 1519
EciI	GGCGGA	1 cut(s)	927
Ecl136II	GAGCTC	1 cut(s)	2263
Eco147I	AGGCCT	1 cut(s)	1969
Eco24I	GRGCYC	2 cut(s)	1663, 2265
Eco32I	GATATC	1 cut(s)	1565
Eco47I	GGWCC	1 cut(s)	1904
Eco47III	AGCGCT	1 cut(s)	982
Eco53kI	GAGCTC	1 cut(s)	2263
Eco57I	CTGAAG	4 cut(s)	1299, 1691, 1974, 2117
EcoICRI	GAGCTC	1 cut(s)	2263
EcoRI	GAATTC	3 cut(s)	299, 580, 1166
EcoRII	CCWGG	4 cut(s)	154, 330, 558, 966
EcoRV	GATATC	1 cut(s)	1565
EcoT38I	GRGCYC	2 cut(s)	1663, 2265
FalI	AAGNNNNNCTT	4 cut(s)	1957, 1989, 2021, 2053
FaqI	GGGAC	4 cut(s)	137, 1709, 1890, 2063
FauI	CCCGC	1 cut(s)	52
FbaI	TGATCA	1 cut(s)	1642
Fnu4HI	GCNGC	7 cut(s)	245, 979, 1046, 1112, 1508, 1577, 2211
FokI	GGATG	5 cut(s)	290, 1157, 1444, 1580, 1622
FriOI	GRGCYC	2 cut(s)	1663, 2265
Fsp4HI	GCNGC	7 cut(s)	245, 979, 1046, 1112, 1508, 1577, 2211
FspBI	CTAG	5 cut(s)	542, 986, 1386, 2094, 2172
GlaI	GCGC	1 cut(s)	982
GluI	GCNGC	7 cut(s)	245, 979, 1046, 1112, 1508, 1577, 2211
GsaI	CCCAGC	1 cut(s)	714
GsuI	CTGGAG	3 cut(s)	111, 177, 942
HaeII	RGCGCY	1 cut(s)	984
HaeIII	GGCC	5 cut(s)	517, 1048, 1969, 2064, 2155
HhaI	GCGC	1 cut(s)	983
Hin6I	GCGC	1 cut(s)	981
HinP1I	GCGC	1 cut(s)	981
HincII	GTYRAC	2 cut(s)	345, 1215
HindII	GTYRAC	2 cut(s)	345, 1215
HindIII	AAGCTT	1 cut(s)	443
HinfI	GANTC	7 cut(s)	150, 857, 915, 1197, 1398, 1665, 2032
HphI	GGTGA	3 cut(s)	956, 1259, 1727
Hpy166II	GTNNAC	5 cut(s)	345, 539, 1215, 1791, 2296
Hpy188I	TCNGA	9 cut(s)	217, 390, 450, 460, 1054, 1318, 1480, 1609, 1993
Hpy8I	GTNNAC	5 cut(s)	345, 539, 1215, 1791, 2296
HpyCH4III	ACNGT	1 cut(s)	2125
HpyCH4IV	ACGT	3 cut(s)	745, 944, 1217
HpyF10VI	GCNNNNNNNGC	5 cut(s)	168, 838, 933, 1589, 2216
HpyF3I	CTNAG	4 cut(s)	48, 266, 1455, 2314
HpySE526I	ACGT	3 cut(s)	745, 944, 1217
HspAI	GCGC	1 cut(s)	981
Ksp22I	TGATCA	1 cut(s)	1642
Kzo9I	GATC	3 cut(s)	82, 418, 1642
LguI	GCTCTTC	2 cut(s)	996, 1387
Lsp1109I	GCAGC	6 cut(s)	256, 990, 1123, 1519, 1563, 2197
LweI	GCATC	3 cut(s)	473, 1755, 2118
MabI	ACCWGGT	1 cut(s)	966
MaeI	CTAG	5 cut(s)	542, 986, 1386, 2094, 2172
MaeII	ACGT	3 cut(s)	745, 944, 1217
MaeIII	GTNAC	5 cut(s)	824, 916, 962, 1121, 1957
MalI	GATC	3 cut(s)	84, 420, 1644
MboI	GATC	3 cut(s)	82, 418, 1642
MfeI	CAATTG	1 cut(s)	1442
MflI	RGATCY	1 cut(s)	418
MhlI	GDGCHC	2 cut(s)	1663, 2265
MlsI	TGGCCA	1 cut(s)	517
MluNI	TGGCCA	1 cut(s)	517
MlyI	GAGTC	3 cut(s)	159, 924, 1659
Mox20I	TGGCCA	1 cut(s)	517
MroXI	GAANNNNTTC	2 cut(s)	1381, 2036
MscI	TGGCCA	1 cut(s)	517
MslI	CAYNNNNRTG	2 cut(s)	591, 2270
Msp20I	TGGCCA	1 cut(s)	517
MspA1I	CMGCKG	1 cut(s)	47
MspR9I	CCNGG	4 cut(s)	156, 332, 560, 968
MunI	CAATTG	1 cut(s)	1442
Mva1269I	GAATGC	1 cut(s)	1886
MvaI	CCWGG	4 cut(s)	156, 332, 560, 968
MwoI	GCNNNNNNNGC	5 cut(s)	168, 838, 933, 1589, 2216
NdeII	GATC	3 cut(s)	82, 418, 1642
NlaIV	GGNNCC	2 cut(s)	182, 1906
NmuCI	GTSAC	3 cut(s)	824, 916, 962
NspI	RCATGY	3 cut(s)	832, 963, 2078
PagI	TCATGA	1 cut(s)	1417
PceI	AGGCCT	1 cut(s)	1969
PciI	ACATGT	1 cut(s)	959
PciSI	GCTCTTC	2 cut(s)	996, 1387
PctI	GAATGC	1 cut(s)	1886
PdmI	GAANNNNTTC	2 cut(s)	1381, 2036
PfeI	GAWTC	4 cut(s)	857, 1197, 1398, 2032
PkrI	GCNGC	7 cut(s)	246, 980, 1047, 1113, 1509, 1578, 2212
PleI	GAGTC	3 cut(s)	158, 923, 1659
PpsI	GAGTC	3 cut(s)	158, 923, 1659
PscI	ACATGT	1 cut(s)	959
Psp124BI	GAGCTC	1 cut(s)	2265
Psp1406I	AACGTT	1 cut(s)	944
Psp6I	CCWGG	4 cut(s)	154, 330, 558, 966
PspFI	CCCAGC	1 cut(s)	710
PspGI	CCWGG	4 cut(s)	154, 330, 558, 966
PspN4I	GGNNCC	2 cut(s)	182, 1906
PspPI	GGNCC	2 cut(s)	1047, 1904
PsrI	GAACNNNNNNTAC	4 cut(s)	2167, 2199, 2277, 2309
PstI	CTGCAG	1 cut(s)	1864
PsuI	RGATCY	1 cut(s)	418
RsaI	GTAC	1 cut(s)	2286
RsaNI	GTAC	1 cut(s)	2285
RseI	CAYNNNNRTG	2 cut(s)	591, 2270
SacI	GAGCTC	1 cut(s)	2265
SapI	GCTCTTC	2 cut(s)	996, 1387
SatI	GCNGC	7 cut(s)	245, 979, 1046, 1112, 1508, 1577, 2211
Sau3AI	GATC	3 cut(s)	82, 418, 1642
Sau96I	GGNCC	2 cut(s)	1047, 1904
SchI	GAGTC	3 cut(s)	159, 924, 1659
ScrFI	CCNGG	4 cut(s)	156, 332, 560, 968
SduI	GDGCHC	2 cut(s)	1663, 2265
SexAI	ACCWGGT	1 cut(s)	966
SfaNI	GCATC	3 cut(s)	473, 1755, 2118
SfcI	CTRYAG	1 cut(s)	1860
SinI	GGWCC	1 cut(s)	1904
SmiMI	CAYNNNNRTG	2 cut(s)	591, 2270
SmlI	CTYRAG	2 cut(s)	833, 1654
SmoI	CTYRAG	2 cut(s)	833, 1654
SseBI	AGGCCT	1 cut(s)	1969
SsiI	CCGC	5 cut(s)	45, 912, 1045, 1309, 2202
SspMI	CTAG	5 cut(s)	542, 986, 1386, 2094, 2172
SstI	GAGCTC	1 cut(s)	2265
StuI	AGGCCT	1 cut(s)	1969
StyD4I	CCNGG	4 cut(s)	154, 330, 558, 966
TaaI	ACNGT	1 cut(s)	2125
TaiI	ACGT	3 cut(s)	748, 947, 1220
TaqI	TCGA	6 cut(s)	104, 568, 1195, 1663, 1749, 2027
TatI	WGTACW	1 cut(s)	2284
TauI	GCSGC	1 cut(s)	1048
TfiI	GAWTC	4 cut(s)	857, 1197, 1398, 2032
TscAI	CASTG	3 cut(s)	869, 925, 2130
TseFI	GTSAC	3 cut(s)	824, 916, 962
TseI	GCWGC	6 cut(s)	244, 978, 1111, 1507, 1576, 2210
Tsp45I	GTSAC	3 cut(s)	824, 916, 962
TspRI	CASTG	3 cut(s)	869, 925, 2130
VpaK11BI	GGWCC	1 cut(s)	1904
XceI	RCATGY	3 cut(s)	832, 963, 2078
XcmI	CCANNNNNNNNNTGG	1 cut(s)	332
XmnI	GAANNNNTTC	2 cut(s)	1381, 2036
XspI	CTAG	5 cut(s)	542, 986, 1386, 2094, 2172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.