Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006178

Physical Location & Seq

Genomic Coordinates Reverse (-)

977676 .. 979895

Gene Structure 2220 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0012400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGGCTTTGGCAGAGAGGTCTACTCATATTGTCCACATGGACAAGTCTCTCATGCCCAAGTCCTTCACTAGCCATCACCATTGGTACTCCTCCATTGTTGATTCCTTCAAAACTGATCTTCACACCTCTTTGGATCGCAACAGGTCCGCGCCATCCCTTTTATACACCTACGATAATGCCTTTCATGGTTTCTCTGCAGTTCTGTCCGCAGATGAATTGGAGAATTTAGAAAAGTCTCCAGCTTTTGTTTCCTCTTACAAGGACAAAACTGTCACAGTTGACACCACCCATACCACTACATTCCTCTCCCTCAACCCTTCCACTGGTTTGTTACCTGCTTCGAATTATGGTGAAGACATCATTGTTGGTGTCATTGATAGTGGGATCTGGCCAGAGAGCGATAGCTTCAGAGATGATGGTCTGACCAAGAACATTCCAGCTAAGTGGAAGGGAAGATGTGAGGTTGGACAAGAGTTCAATGCCTCTTTGTGTAACAACAAATTAATAGGAGCAAGATACTTTAACAAGGGTGTGAGGGCTGCAAACCCCGGTGTCACACTTAGCATGAACTCTGCTAGAGACTCTGAAGGCCATGGGACTCACACATCCTCGACCGCTGCAGGGAACTTCGTGAATGGGGCATCTTATTTCGGTTATGCTAAAGGAACAGCTAGAGGTGTAGCACCACGTTCCAGGGTTGCCATGTACAAGGTCCTTTGGGATGAAGGTAGATACGCCTCTGATGTTCTAGCAGGCATGGACCAAGCTATTGCTGATGGTGTGGATGTTATTTCAATCTCACTGGGCTTTGATGACACGCCATTGTACGAGGATCCTGTAGCAATAGCATCCTTTGCCGCTATGGAGAAGAATGTAGTAGTTTCATCTTCAGCCGGAAATGAAGGCACAGGGGGCCTTGGGAAATTGCACAATGGCATCCCTTGGGCCCTGACTGTTGCAGCTGGCACGATTGACCGCTCATTTGGTGGAACATTAAGTCTTGGTAATGGTTTAACCGTTCCTGGATTTACCTTGTTCCCAGCAAATGCTCTGATAAATAAGCTTCCACTGGTTTACAACAAGACATTATCAGCTTGCAACGACACAGAACTATTATATACTGGCCCCAGTGCAATCCTCATATGTGATGACATTTCGGATATCCGTGGTCAAATATCTCATATCATTGCTGCAGAGGTGCTTGGAGCTGTCTTTATTTCGAACGATCCTGGTATTCATGAGTTAGGATATGTTGGAACTCCTATTGTGGTGCTAAGTCCAGATGATGGACCAGCTCTTTTCAAATATGCAAAAAGTGCTGACCCTATCGTTAGCATAACATTCCAACAAACATTTGTTGGGACAAAGCCTGCACCGGCTGCTGCATTTTACTCTTCAAGAGGTCCTTCATCAAGTTATCCGGGTATCTTGAAGCCGGACATAATGGCACCAGGGTCATTAGTTTTGGCTGCTTGGCCTCCGAATGTAGCAGCTGCCCAAATTGGTGGAAATGTGATGTTACCAAGTGACTATAATTTGATATCTGGAACATCCATGTCTTGCCCTCATGCTTCAGGCGTAGCTGCTCTACTGAAAGGTGCACACCCAGAATGGAGTGCAGCTGCCATTAGGTCTGCTTTGGTCACCACAGCCAACCCATTAGACAATACTCAGAATCCAATTCGTGACAATGGTGACAATTTCAACTTTGCTTCACCTCTAGCAATGGGAGCAGGCCAGATTGATCCTAACAGAGCACTTGAACCCGGTTTGATATATGATGCAACCACTCAAGACTATATCAATCTCTTGTGCTCCACAAACTTTACCCGCAAGCAAATCTCAGCCATCACTAGATCACATGACTACGATTGTTCCAAGCCATCTTGTGATCTGAACTACCCATCGTTCATTGCTTTGTATGGTCGACATCACCCAAAGAAGTTAAGGGTTCAAAAGTTTCAGAGGACAGTAACAAATGTGGGAGATGGTGCAGCCAAGTACAAGGCTGTGGTAACAGCTCCAAAGGGTTCTATGGTAACAGTGTCGCCTGAGATACTGAAATTTGCAAATATATATGAAAAGCAAAGCTACACTGTTACCATAAAGTATGAGGGGGACAAAAAGAATAGAAAGGTTTCTTTTGGTGAACTTGTTTGGGTCGAAGAAAATGGAAAATACAAAGTCAGGAGCCCCATTGTAGTGTCACCTCTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_repressed

Protein Analysis

739

Amino Acids

79.07

Weight (kDa)

6.42

Isoelectric Point (pI)

30.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	8 - 93	1.8e-17	Peptidase inhibitor I9
Peptidase_S8	PF00082	117 - 557	4.3e-45	Subtilase family
fn3_6	PF17766	631 - 735	9.3e-29	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006178)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56220 AT1G56220 AT1G56220 AT1G56220 AT1G56220
fragaria_vesca	FvH4_6g06830
malus_domestica	MD04G1198800.v1.1 MD12G1212000.v1.1
prunus_persica	Prupe.6G319600_v2.0.a1 Prupe.6G319600_v2.0.a1
pyrus_communis	pycom04g17570 pycom12g19830
rosa_chinensis	RchiOBHm_Chr3g0456211
rosa_laevigata	RLG00000025315
rosa_multiflora	Rmu_sc0000279.1_g000062 Rmu_sc0002607.1_g000041
rosa_roxburghii	Rroxscaffold_6G00422920 Rroxscaffold_6G00423710
rosa_rugosa	Rorug03G0012200 Rorug03G0012300 Rorug03G0012400
rosa_samantha	Rh3AG072400 Rh3BG074400 Rh3CG073900 Rh3DG075700
rosa_wichuraiana	Rw3G005870 Rw3G006170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	269
Acc36I	ACCTGC	1 cut(s)	343
AccB1I	GGYRCC	1 cut(s)	1447
AccB7I	CCANNNNNTGG	1 cut(s)	1286
AccBSI	CCGCTC	1 cut(s)	978
AccI	GTMKAC	2 cut(s)	20, 1927
AccII	CGCG	1 cut(s)	149
AciI	CCGC	6 cut(s)	147, 207, 615, 858, 976, 1831
AclWI	GGATC	6 cut(s)	141, 392, 827, 840, 1220, 1739
AcoI	YGGCCR	1 cut(s)	389
AcsI	RAATTY	2 cut(s)	223, 2063
AcuI	CTGAAG	4 cut(s)	391, 606, 873, 1557
AfaI	GTAC	4 cut(s)	86, 707, 827, 2003
AfiI	CCNNNNNNNGG	3 cut(s)	323, 621, 1286
AgsI	TTSAA	9 cut(s)	109, 478, 795, 1303, 1398, 1432, 1705, 1763, 1955
AjnI	CCWGG	4 cut(s)	692, 1021, 1228, 1450
Alw21I	GWGCWC	3 cut(s)	1603, 1759, 1817
Alw26I	GTCTC	3 cut(s)	51, 240, 573
Alw44I	GTGCAC	1 cut(s)	1599
AlwI	GGATC	6 cut(s)	141, 392, 827, 840, 1220, 1739
AoxI	GGCC	7 cut(s)	389, 589, 913, 945, 1123, 1475, 1735
ApaI	GGGCCC	1 cut(s)	949
ApaLI	GTGCAC	1 cut(s)	1599
ApoI	RAATTY	2 cut(s)	223, 2063
ArsI	GACNNNNNNTTYG	2 cut(s)	965, 997
AseI	ATTAAT	1 cut(s)	503
Asp700I	GAANNNNTTC	1 cut(s)	2137
AspLEI	GCGC	1 cut(s)	151
AspS9I	GGNCC	9 cut(s)	144, 712, 760, 913, 945, 946, 1124, 1289, 1403
AsuC2I	CCSGG	3 cut(s)	549, 1422, 1767
AsuHPI	GGTGA	8 cut(s)	68, 362, 1636, 1706, 1707, 1925, 2159, 2199
AsuII	TTCGAA	2 cut(s)	341, 1220
AvaII	GGWCC	5 cut(s)	144, 712, 760, 1289, 1403
BaeGI	GKGCMC	2 cut(s)	949, 1603
BalI	TGGCCA	1 cut(s)	391
BamHI	GGATCC	1 cut(s)	832
BanI	GGYRCC	1 cut(s)	1447
BanII	GRGCYC	2 cut(s)	949, 2195
BbsI	GAAGAC	1 cut(s)	360
Bbv12I	GWGCWC	3 cut(s)	1603, 1759, 1817
BccI	CCATC	9 cut(s)	81, 160, 410, 770, 1280, 1856, 1891, 1912, 1982
BciT130I	CCWGG	4 cut(s)	694, 1023, 1230, 1452
BcnI	CCSGG	3 cut(s)	549, 1422, 1767
BcoDI	GTCTC	3 cut(s)	51, 240, 573
BfaI	CTAG	6 cut(s)	69, 576, 672, 749, 1721, 1854
BfmI	CTRYAG	4 cut(s)	195, 618, 837, 1191
BfuAI	ACCTGC	1 cut(s)	343
Bme1390I	CCNGG	7 cut(s)	549, 694, 1023, 1230, 1422, 1452, 1767
Bme18I	GGWCC	5 cut(s)	144, 712, 760, 1289, 1403
BmgT120I	GGNCC	9 cut(s)	144, 712, 760, 913, 945, 946, 1124, 1289, 1403
BmiI	GGNNCC	6 cut(s)	834, 914, 947, 1126, 1449, 2192
BmrFI	CCNGG	7 cut(s)	549, 694, 1023, 1230, 1422, 1452, 1767
BmrI	ACTGGG	2 cut(s)	812, 1122
BmsI	GCATC	4 cut(s)	650, 857, 945, 1771
BmuI	ACTGGG	2 cut(s)	812, 1122
BpiI	GAAGAC	1 cut(s)	360
BplI	GAGNNNNNCTC	2 cut(s)	7, 39
BpmI	CTGGAG	1 cut(s)	222
Bpu14I	TTCGAA	2 cut(s)	341, 1220
BpuEI	CTTGAG	1 cut(s)	1776
BpuMI	CCSGG	3 cut(s)	549, 1422, 1767
BsaJI	CCNNGG	7 cut(s)	547, 592, 693, 916, 941, 1165, 1451
Bsc4I	CCNNNNNNNGG	3 cut(s)	323, 621, 1286
Bse118I	RCCGGY	1 cut(s)	1375
Bse1I	ACTGG	5 cut(s)	328, 807, 1074, 1126, 1128
Bse3DI	GCAATG	3 cut(s)	1185, 1731, 1911
BseBI	CCWGG	4 cut(s)	694, 1023, 1230, 1452
BseDI	CCNNGG	7 cut(s)	547, 592, 693, 916, 941, 1165, 1451
BseGI	GGATG	7 cut(s)	152, 605, 727, 790, 848, 936, 1550
BseLI	CCNNNNNNNGG	3 cut(s)	323, 621, 1286
BseMI	GCAATG	3 cut(s)	1185, 1731, 1911
BseMII	CTCAG	3 cut(s)	1685, 1857, 2043
BseNI	ACTGG	5 cut(s)	328, 807, 1074, 1126, 1128
BseRI	GAGGAG	1 cut(s)	79
BseSI	GKGCMC	2 cut(s)	949, 1603
BseYI	CCCAGC	1 cut(s)	1039
BsgI	GTGCAG	3 cut(s)	1356, 1638, 2013
Bsh1236I	CGCG	1 cut(s)	149
Bsh1285I	CGRYCG	1 cut(s)	615
BshFI	GGCC	7 cut(s)	391, 591, 915, 947, 1125, 1477, 1737
BshNI	GGYRCC	1 cut(s)	1447
BsiEI	CGRYCG	1 cut(s)	615
BsiHKAI	GWGCWC	3 cut(s)	1603, 1759, 1817
BsiSI	CCGG	6 cut(s)	549, 894, 1376, 1421, 1436, 1767
BslFI	GGGAC	3 cut(s)	610, 1375, 2132
BslI	CCNNNNNNNGG	3 cut(s)	323, 621, 1286
BsmAI	GTCTC	3 cut(s)	51, 240, 573
BsmFI	GGGAC	3 cut(s)	610, 1375, 2132
BsnI	GGCC	7 cut(s)	391, 591, 915, 947, 1125, 1477, 1737
Bsp119I	TTCGAA	2 cut(s)	341, 1220
Bsp120I	GGGCCC	1 cut(s)	945
Bsp1286I	GDGCHC	5 cut(s)	949, 1603, 1759, 1817, 2195
Bsp1407I	TGTACA	1 cut(s)	705
Bsp143I	GATC	8 cut(s)	115, 133, 384, 832, 1225, 1744, 1856, 1891
Bsp19I	CCATGG	1 cut(s)	592
BspACI	CCGC	6 cut(s)	147, 207, 615, 858, 976, 1831
BspANI	GGCC	7 cut(s)	391, 591, 915, 947, 1125, 1477, 1737
BspCNI	CTCAG	3 cut(s)	1684, 1856, 2044
BspFNI	CGCG	1 cut(s)	149
BspHI	TCATGA	1 cut(s)	1237
BspLI	GGNNCC	6 cut(s)	834, 914, 947, 1126, 1449, 2192
BspMAI	CTGCAG	3 cut(s)	199, 622, 1195
BspMI	ACCTGC	1 cut(s)	343
BspPI	GGATC	6 cut(s)	141, 392, 827, 840, 1220, 1739
BspT104I	TTCGAA	2 cut(s)	341, 1220
BspT107I	GGYRCC	1 cut(s)	1447
BsrBI	CCGCTC	1 cut(s)	978
BsrDI	GCAATG	3 cut(s)	1185, 1731, 1911
BsrFI	RCCGGY	1 cut(s)	1375
BsrGI	TGTACA	1 cut(s)	705
BsrI	ACTGG	5 cut(s)	328, 807, 1074, 1126, 1128
BssAI	RCCGGY	1 cut(s)	1375
BssECI	CCNNGG	7 cut(s)	547, 592, 693, 916, 941, 1165, 1451
BssMI	GATC	8 cut(s)	115, 133, 384, 832, 1225, 1744, 1856, 1891
BssT1I	CCWWGG	3 cut(s)	592, 916, 941
Bst2UI	CCWGG	4 cut(s)	694, 1023, 1230, 1452
Bst4CI	ACNGT	7 cut(s)	271, 277, 955, 1018, 1972, 2044, 2098
Bst6I	CTCTTC	1 cut(s)	1399
BstAPI	GCANNNNNTGC	3 cut(s)	854, 1316, 1379
BstAUI	TGTACA	1 cut(s)	705
BstBI	TTCGAA	2 cut(s)	341, 1220
BstC8I	GCNNGC	6 cut(s)	754, 964, 1096, 1371, 1735, 1835
BstDEI	CTNAG	6 cut(s)	441, 560, 1274, 1671, 1843, 2052
BstDSI	CCRYGG	2 cut(s)	592, 1165
BstEII	GGTNACC	1 cut(s)	1642
BstF5I	GGATG	7 cut(s)	152, 605, 727, 790, 848, 936, 1550
BstFNI	CGCG	1 cut(s)	149
BstHHI	GCGC	1 cut(s)	151
BstKTI	GATC	8 cut(s)	118, 136, 387, 835, 1228, 1747, 1859, 1894
BstMAI	GTCTC	3 cut(s)	51, 240, 573
BstMBI	GATC	8 cut(s)	115, 133, 384, 832, 1225, 1744, 1856, 1891
BstMCI	CGRYCG	1 cut(s)	615
BstMWI	GCNNNNNNNGC	5 cut(s)	854, 912, 1316, 1379, 1730
BstNI	CCWGG	4 cut(s)	694, 1023, 1230, 1452
BstPI	GGTNACC	1 cut(s)	1642
BstSCI	CCNGG	7 cut(s)	547, 692, 1021, 1228, 1420, 1450, 1765
BstSFI	CTRYAG	4 cut(s)	195, 618, 837, 1191
BstSLI	GKGCMC	2 cut(s)	949, 1603
BstUI	CGCG	1 cut(s)	149
BstV2I	GAAGAC	1 cut(s)	360
BstX2I	RGATCY	2 cut(s)	384, 832
BstXI	CCANNNNNNTGG	2 cut(s)	444, 1505
BstYI	RGATCY	2 cut(s)	384, 832
BsuRI	GGCC	7 cut(s)	391, 591, 915, 947, 1125, 1477, 1737
BtgI	CCRYGG	2 cut(s)	592, 1165
BtsCI	GGATG	7 cut(s)	152, 605, 727, 790, 848, 936, 1550
BtsIMutI	CAGTG	6 cut(s)	321, 800, 1067, 1135, 2049, 2094
BveI	ACCTGC	1 cut(s)	343
Cac8I	GCNNGC	6 cut(s)	754, 964, 1096, 1371, 1735, 1835
CciI	TCATGA	1 cut(s)	1237
CfoI	GCGC	1 cut(s)	151
Cfr10I	RCCGGY	1 cut(s)	1375
Cfr13I	GGNCC	9 cut(s)	144, 712, 760, 913, 945, 946, 1124, 1289, 1403
Csp6I	GTAC	4 cut(s)	85, 706, 826, 2002
CviQI	GTAC	4 cut(s)	85, 706, 826, 2002
DdeI	CTNAG	6 cut(s)	441, 560, 1274, 1671, 1843, 2052
DpnI	GATC	8 cut(s)	117, 135, 386, 834, 1227, 1746, 1858, 1893
DpnII	GATC	8 cut(s)	115, 133, 384, 832, 1225, 1744, 1856, 1891
DrdI	GACNNNNNNGTC	1 cut(s)	269
DseDI	GACNNNNNNGTC	1 cut(s)	269
EaeI	YGGCCR	1 cut(s)	389
Eam1104I	CTCTTC	1 cut(s)	1399
EarI	CTCTTC	1 cut(s)	1399
Eco130I	CCWWGG	3 cut(s)	592, 916, 941
Eco24I	GRGCYC	2 cut(s)	949, 2195
Eco32I	GATATC	2 cut(s)	1162, 1542
Eco47I	GGWCC	5 cut(s)	144, 712, 760, 1289, 1403
Eco57I	CTGAAG	4 cut(s)	391, 606, 873, 1557
Eco91I	GGTNACC	1 cut(s)	1642
EcoO109I	RGGNCCY	4 cut(s)	712, 913, 946, 1403
EcoO65I	GGTNACC	1 cut(s)	1642
EcoRII	CCWGG	4 cut(s)	692, 1021, 1228, 1450
EcoRV	GATATC	2 cut(s)	1162, 1542
EcoT14I	CCWWGG	3 cut(s)	592, 916, 941
EcoT38I	GRGCYC	2 cut(s)	949, 2195
ErhI	CCWWGG	3 cut(s)	592, 916, 941
FalI	AAGNNNNNCTT	2 cut(s)	1390, 1422
FaqI	GGGAC	3 cut(s)	610, 1375, 2132
FauI	CCCGC	1 cut(s)	1838
FauNDI	CATATG	1 cut(s)	1142
FblI	GTMKAC	2 cut(s)	20, 1927
FokI	GGATG	7 cut(s)	139, 592, 734, 797, 835, 923, 1537
FriOI	GRGCYC	2 cut(s)	949, 2195
FspBI	CTAG	6 cut(s)	69, 576, 672, 749, 1721, 1854
GlaI	GCGC	1 cut(s)	150
GsaI	CCCAGC	1 cut(s)	1043
GsuI	CTGGAG	1 cut(s)	222
HaeIII	GGCC	7 cut(s)	391, 591, 915, 947, 1125, 1477, 1737
HapII	CCGG	6 cut(s)	549, 894, 1376, 1421, 1436, 1767
HhaI	GCGC	1 cut(s)	151
Hin6I	GCGC	1 cut(s)	149
HinP1I	GCGC	1 cut(s)	149
HincII	GTYRAC	2 cut(s)	280, 1928
HindII	GTYRAC	2 cut(s)	280, 1928
HindIII	AAGCTT	1 cut(s)	1061
HinfI	GANTC	4 cut(s)	101, 581, 598, 1675
HpaII	CCGG	6 cut(s)	549, 894, 1376, 1421, 1436, 1767
HphI	GGTGA	8 cut(s)	68, 362, 1636, 1706, 1707, 1925, 2159, 2199
Hpy166II	GTNNAC	7 cut(s)	21, 34, 280, 1075, 1601, 1928, 2150
Hpy188III	TCNNGA	9 cut(s)	631, 1238, 1280, 1398, 1429, 1545, 1685, 1793, 2188
Hpy8I	GTNNAC	7 cut(s)	21, 34, 280, 1075, 1601, 1928, 2150
HpyAV	CCTTC	8 cut(s)	73, 115, 327, 442, 581, 719, 896, 1416
HpyCH4III	ACNGT	7 cut(s)	271, 277, 955, 1018, 1972, 2044, 2098
HpyCH4IV	ACGT	1 cut(s)	688
HpyF10VI	GCNNNNNNNGC	5 cut(s)	854, 912, 1316, 1379, 1730
HpyF3I	CTNAG	6 cut(s)	441, 560, 1274, 1671, 1843, 2052
HpySE526I	ACGT	1 cut(s)	688
HspAI	GCGC	1 cut(s)	149
Kzo9I	GATC	8 cut(s)	115, 133, 384, 832, 1225, 1744, 1856, 1891
LmnI	GCTCC	6 cut(s)	509, 1205, 1730, 1820, 2026, 2190
LweI	GCATC	4 cut(s)	650, 857, 945, 1771
MaeI	CTAG	6 cut(s)	69, 576, 672, 749, 1721, 1854
MaeII	ACGT	1 cut(s)	688
MalI	GATC	8 cut(s)	117, 135, 386, 834, 1227, 1746, 1858, 1893
MbiI	CCGCTC	1 cut(s)	978
MboI	GATC	8 cut(s)	115, 133, 384, 832, 1225, 1744, 1856, 1891
MboII	GAAGA	7 cut(s)	110, 365, 465, 879, 880, 1386, 2177
MflI	RGATCY	2 cut(s)	384, 832
MhlI	GDGCHC	5 cut(s)	949, 1603, 1759, 1817, 2195
MlsI	TGGCCA	1 cut(s)	391
MluNI	TGGCCA	1 cut(s)	391
MlyI	GAGTC	2 cut(s)	575, 592
MmeI	TCCRAC	3 cut(s)	445, 1234, 1369
Mox20I	TGGCCA	1 cut(s)	391
MroXI	GAANNNNTTC	1 cut(s)	2137
MscI	TGGCCA	1 cut(s)	391
MseI	TTAA	5 cut(s)	503, 522, 995, 1013, 1946
MslI	CAYNNNNRTG	1 cut(s)	2201
Msp20I	TGGCCA	1 cut(s)	391
MspA1I	CMGCKG	4 cut(s)	617, 962, 1493, 1622
MspI	CCGG	6 cut(s)	549, 894, 1376, 1421, 1436, 1767
MspR9I	CCNGG	7 cut(s)	549, 694, 1023, 1230, 1422, 1452, 1767
MvaI	CCWGG	4 cut(s)	694, 1023, 1230, 1452
MvnI	CGCG	1 cut(s)	149
MwoI	GCNNNNNNNGC	5 cut(s)	854, 912, 1316, 1379, 1730
NciI	CCSGG	3 cut(s)	549, 1422, 1767
NcoI	CCATGG	1 cut(s)	592
NdeI	CATATG	1 cut(s)	1142
NdeII	GATC	8 cut(s)	115, 133, 384, 832, 1225, 1744, 1856, 1891
NlaIV	GGNNCC	6 cut(s)	834, 914, 947, 1126, 1449, 2192
NmuCI	GTSAC	7 cut(s)	271, 553, 1526, 1642, 1685, 1694, 2205
NspV	TTCGAA	2 cut(s)	341, 1220
PagI	TCATGA	1 cut(s)	1237
PdmI	GAANNNNTTC	1 cut(s)	2137
PfeI	GAWTC	2 cut(s)	101, 1675
PflMI	CCANNNNNTGG	1 cut(s)	1286
PfoI	TCCNGGA	1 cut(s)	1021
PleI	GAGTC	2 cut(s)	575, 592
PpsI	GAGTC	2 cut(s)	575, 592
PpuMI	RGGWCCY	2 cut(s)	712, 1403
PshBI	ATTAAT	1 cut(s)	503
Psp5II	RGGWCCY	2 cut(s)	712, 1403
Psp6I	CCWGG	4 cut(s)	692, 1021, 1228, 1450
PspEI	GGTNACC	1 cut(s)	1642
PspFI	CCCAGC	1 cut(s)	1039
PspGI	CCWGG	4 cut(s)	692, 1021, 1228, 1450
PspN4I	GGNNCC	6 cut(s)	834, 914, 947, 1126, 1449, 2192
PspOMI	GGGCCC	1 cut(s)	945
PspPI	GGNCC	9 cut(s)	144, 712, 760, 913, 945, 946, 1124, 1289, 1403
PspPPI	RGGWCCY	2 cut(s)	712, 1403
PstI	CTGCAG	3 cut(s)	199, 622, 1195
PsuI	RGATCY	2 cut(s)	384, 832
PvuII	CAGCTG	3 cut(s)	962, 1493, 1622
RsaI	GTAC	4 cut(s)	86, 707, 827, 2003
RsaNI	GTAC	4 cut(s)	85, 706, 826, 2002
RseI	CAYNNNNRTG	1 cut(s)	2201
SalI	GTCGAC	1 cut(s)	1926
SaqAI	TTAA	5 cut(s)	503, 522, 995, 1013, 1946
Sau3AI	GATC	8 cut(s)	115, 133, 384, 832, 1225, 1744, 1856, 1891
Sau96I	GGNCC	9 cut(s)	144, 712, 760, 913, 945, 946, 1124, 1289, 1403
SchI	GAGTC	2 cut(s)	575, 592
ScrFI	CCNGG	7 cut(s)	549, 694, 1023, 1230, 1422, 1452, 1767
SduI	GDGCHC	5 cut(s)	949, 1603, 1759, 1817, 2195
SfaNI	GCATC	4 cut(s)	650, 857, 945, 1771
SfcI	CTRYAG	4 cut(s)	195, 618, 837, 1191
SfuI	TTCGAA	2 cut(s)	341, 1220
SinI	GGWCC	5 cut(s)	144, 712, 760, 1289, 1403
SmiMI	CAYNNNNRTG	1 cut(s)	2201
SmlI	CTYRAG	1 cut(s)	1791
SmoI	CTYRAG	1 cut(s)	1791
SsiI	CCGC	6 cut(s)	147, 207, 615, 858, 976, 1831
SspMI	CTAG	6 cut(s)	69, 576, 672, 749, 1721, 1854
StyD4I	CCNGG	7 cut(s)	547, 692, 1021, 1228, 1420, 1450, 1765
StyI	CCWWGG	3 cut(s)	592, 916, 941
TaaI	ACNGT	7 cut(s)	271, 277, 955, 1018, 1972, 2044, 2098
TaiI	ACGT	1 cut(s)	691
TaqI	TCGA	5 cut(s)	341, 611, 1220, 1927, 2163
TatI	WGTACW	2 cut(s)	705, 2001
TauI	GCSGC	1 cut(s)	860
TfiI	GAWTC	2 cut(s)	101, 1675
Tru1I	TTAA	5 cut(s)	503, 522, 995, 1013, 1946
Tru9I	TTAA	5 cut(s)	503, 522, 995, 1013, 1946
TscAI	CASTG	6 cut(s)	328, 807, 1074, 1135, 2049, 2101
TseFI	GTSAC	7 cut(s)	271, 553, 1526, 1642, 1685, 1694, 2205
Tsp45I	GTSAC	7 cut(s)	271, 553, 1526, 1642, 1685, 1694, 2205
TspGWI	ACGGA	1 cut(s)	1154
TspRI	CASTG	6 cut(s)	328, 807, 1074, 1135, 2049, 2101
Van91I	CCANNNNNTGG	1 cut(s)	1286
VneI	GTGCAC	1 cut(s)	1599
VpaK11BI	GGWCC	5 cut(s)	144, 712, 760, 1289, 1403
VspI	ATTAAT	1 cut(s)	503
XapI	RAATTY	2 cut(s)	223, 2063
XmiI	GTMKAC	2 cut(s)	20, 1927
XmnI	GAANNNNTTC	1 cut(s)	2137
XspI	CTAG	6 cut(s)	69, 576, 672, 749, 1721, 1854

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.