Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006802

Physical Location & Seq

Genomic Coordinates Reverse (-)

20675901 .. 20683857

Gene Structure 7957 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0225200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGCCATGTCTTCCTGGTTCTCTCGCTTACGCTATTCCTCAAAGTCCTTGTTCAACTCTACTCCGCCTCTCCTCCGATCCTCCTTCTCCACCAAGCTCATCACAACTCCAACACCAACAGCAAACTCCGGCAGCCCATTTCCGTTTTGGTCTCTTCCAATCGCTGTAGCTGCTGGATCACTCGCCCTCTATCCCCAGTCAAACCCCTCACTCTGCCAAGCTCCCAATGCCAATGCTCGAACCGAGTTTGTGGTCGAAGGCTTACACAAGGAAGTCCCACAAGAACTTATCAATGAATTGAAGGCTGTTTGTAAGGATAACATGACAGTGGATTATGAGGAGAGGTATAACCATGGTAAACCACAAAACAGCTTTCACAAAGCTGTCAACATTCCTGACCTGGTTGTTTTCGCGCAGTCTGAAGAGGAAGTTTGTAAGATAGTCAAGCTATGTGACAAGCACAAGGTCCCCATTGTGCCATATGGTGGAGCGACATCAATCGAGGGTCACACCTTGTCTCCCCATGGAGGTGTTTGCATTGACATGTCATCAATGAAGAATGTCAAAGCTTTACATGTTGAGGACATGGATGTCATTGTTGAACCTGGCATTGGATGGATGGAGCTTAATGAATACTTGGAGCCTTATGGTTTATTCTTTCCCCTGGATCCAGGACCTGGTGCAACAATTGGAGGAATGTGTGCTACACGTTGCTCTGGTTCGTTAGCTGTTAGGTATGGAACAATGCGTGATAATGTCATCAGTCTCAAGGCAGTTCTTGCAAATGGAGAGGTGGTGAAGACTGCATCTCGTGCTCGAAAGAGTGCAGCAGGGTATGATTTGACACGCCTGATGATTGGAAGTGAAGGAACTCTTGGTGTAATTACTGAAGTAACTCTACGACTGCAGAAAATTCCCCAATATTCAGTGGTTGCTATGTGTAATTTCCCTTCAATTAAGGATGCGGCAGATGTTGCTATTGCTACTATGCTGTCTGGAATACAAGTGTCAAGGGTTGAGCTACTGGATGAAGTTCAAGTGAGGGCTATCAATATTGCTAATGGGAAGAATTTGCCAGAAACACCAACTTTGATGTTTGAGTTTATAGGCACAGAGGCCTATTCACGTGAACAAACCCAAATAGTTCAGAAGATTGTGTCTGAACACAATGGCTCAGATTTTGTTTATGCAGAAGACCCTGATACTAAAAAGGAACTCTGGAAGATAAGGAAGGAAGCACTCTGGGCATGCTTTGCAATGGAACCTGATTTTGAGGCAATGATTTCGGATGTTTGTGTACCTCTATCATGCCTTGCAGAATTGATATCAAGGTCCAAGCAAGAATTGGATGCGTCAGAACTGGTTTGCACAGTTATTGCTCATGCTGGTGATGGGAACTTCCACACAGTGATTCTTTTCGATCCTAACAAAGAAGAACATCGACGAGAAGCAGAGAGATTAAACCATTTTATGGTTCATACTGCCTTGTCAATGGAAGGAACATGTACTGGGGAACATGGTGTTGGCACAGGAAAAATGAAGTATCTTGAAAAAGAATTAGGAGCAGAGGCTTTGAAGACCATGAAAAGAATAAAAGTAGCATTGGATCCCAACAACATCATGAATCCAGGAAAGCTTATTCCTTCTCATGTTTGTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0008033 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008175 GO:0009451 GO:0009628 GO:0009651 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016741 GO:0030488 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TRM13 zf-TRM13_CCCH zf-U11-48K

Protein Analysis

553

Amino Acids

60.7

Weight (kDa)

5.81

Isoelectric Point (pI)

37.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	132 - 268	3.8e-37	FAD binding domain
FAD-oxidase_C	PF02913	305 - 546	3.9e-71	FAD linked oxidases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006802)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01880 AT4G01880 AT4G01880
fragaria_vesca	FvH4_1g26500
malus_domestica	MD09G1293200.v1.1 MD17G1281000.v1.1
prunus_persica	Prupe.3G004500_v2.0.a1
pyrus_communis	pycom09g19590 pycom17g27870
rosa_chinensis	RchiOBHm_Chr3g0486571 RchiOBHm_Chr7g0232271
rosa_laevigata	RLG00000001358 RLG00000023076
rosa_multiflora	Rmu_co8193526.1_g000001 Rmu_sc0023880.1_g000001
rosa_roxburghii	Rroxscaffold_6G00395790
rosa_rugosa	Rorug03G0225200 Rorug07G0272400
rosa_samantha	Rh3AG275300 Rh3BG310300 Rh3CG309600 Rh3DG306300 Rh7CG446100 Rh7DG417400 Rh7DG417600
rosa_wichuraiana	Rw3G024530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	590
AccB7I	CCANNNNNTGG	3 cut(s)	485, 677, 1471
AccII	CGCG	1 cut(s)	413
AciI	CCGC	2 cut(s)	65, 965
AclWI	GGATC	7 cut(s)	72, 184, 662, 675, 1415, 1601, 1614
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	912, 1069
AcuI	CTGAAG	2 cut(s)	441, 909
AcvI	CACGTG	1 cut(s)	1127
AdeI	CACNNNGTG	1 cut(s)	1408
AfaI	GTAC	2 cut(s)	1299, 1507
AfiI	CCNNNNNNNGG	5 cut(s)	485, 527, 611, 677, 1471
AflIII	ACRYGT	4 cut(s)	543, 574, 707, 1502
AgsI	TTSAA	7 cut(s)	55, 301, 602, 954, 1037, 1550, 1576
AjnI	CCWGG	7 cut(s)	14, 399, 604, 663, 670, 676, 1627
AjuI	GAANNNNNNNTTGG	6 cut(s)	594, 626, 858, 890, 1506, 1538
Alw21I	GWGCWC	1 cut(s)	817
Alw26I	GTCTC	3 cut(s)	156, 522, 770
AlwI	GGATC	7 cut(s)	72, 184, 662, 675, 1415, 1601, 1614
AlwNI	CAGNNNCTG	1 cut(s)	677
AoxI	GGCC	2 cut(s)	3, 1116
ApeKI	GCWGC	3 cut(s)	132, 170, 827
ApoI	RAATTY	2 cut(s)	912, 1069
AspLEI	GCGC	1 cut(s)	415
AspS9I	GGNCC	3 cut(s)	466, 674, 1332
AsuHPI	GGTGA	2 cut(s)	808, 1400
AvaII	GGWCC	3 cut(s)	466, 674, 1332
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	2 cut(s)	667, 1606
BarI	GAAGNNNNNNTAC	4 cut(s)	882, 914, 934, 966
BauI	CACGAG	1 cut(s)	810
BbrPI	CACGTG	1 cut(s)	1127
BbsI	GAAGAC	4 cut(s)	3, 806, 1200, 1583
Bbv12I	GWGCWC	1 cut(s)	817
BbvI	GCAGC	3 cut(s)	144, 157, 839
BccI	CCATC	3 cut(s)	609, 613, 1385
BcgI	CGANNNNNNTGC	2 cut(s)	1266, 1300
BciT130I	CCWGG	7 cut(s)	16, 401, 606, 665, 672, 678, 1629
BcoDI	GTCTC	3 cut(s)	156, 522, 770
BfmI	CTRYAG	2 cut(s)	165, 905
BisI	GCNGC	4 cut(s)	133, 171, 828, 966
BlsI	GCNGC	4 cut(s)	134, 172, 829, 967
Bme1390I	CCNGG	7 cut(s)	16, 401, 606, 665, 672, 678, 1629
Bme18I	GGWCC	3 cut(s)	466, 674, 1332
BmgT120I	GGNCC	3 cut(s)	466, 674, 1332
BmiI	GGNNCC	5 cut(s)	468, 642, 669, 1263, 1608
BmrFI	CCNGG	7 cut(s)	16, 401, 606, 665, 672, 678, 1629
BmrI	ACTGGG	2 cut(s)	190, 1518
BmsI	GCATC	3 cut(s)	815, 952, 1339
BmuI	ACTGGG	2 cut(s)	190, 1518
BpiI	GAAGAC	4 cut(s)	3, 806, 1200, 1583
BpuEI	CTTGAG	1 cut(s)	752
BsaAI	YACGTR	1 cut(s)	1127
BsaI	GGTCTC	1 cut(s)	156
BsaJI	CCNNGG	3 cut(s)	352, 523, 663
BsaXI	ACNNNNNCTCC	4 cut(s)	502, 532, 780, 810
Bsc4I	CCNNNNNNNGG	5 cut(s)	485, 527, 611, 677, 1471
Bse1I	ACTGG	4 cut(s)	196, 1029, 1365, 1513
Bse3DI	GCAATG	2 cut(s)	1263, 1284
BseBI	CCWGG	7 cut(s)	16, 401, 606, 665, 672, 678, 1629
BseDI	CCNNGG	3 cut(s)	352, 523, 663
BseGI	GGATG	7 cut(s)	595, 620, 624, 967, 1033, 1294, 1354
BseLI	CCNNNNNNNGG	5 cut(s)	485, 527, 611, 677, 1471
BseMI	GCAATG	2 cut(s)	1263, 1284
BseMII	CTCAG	1 cut(s)	1188
BseNI	ACTGG	4 cut(s)	196, 1029, 1365, 1513
BseRI	GAGGAG	2 cut(s)	62, 353
BseXI	GCAGC	3 cut(s)	144, 157, 839
BsgI	GTGCAG	1 cut(s)	846
Bsh1236I	CGCG	1 cut(s)	413
BshFI	GGCC	2 cut(s)	5, 1118
BsiHKAI	GWGCWC	1 cut(s)	817
BsiSI	CCGG	1 cut(s)	129
BslFI	GGGAC	2 cut(s)	260, 452
BslI	CCNNNNNNNGG	5 cut(s)	485, 527, 611, 677, 1471
BsmAI	GTCTC	3 cut(s)	156, 522, 770
BsmFI	GGGAC	2 cut(s)	260, 452
BsnI	GGCC	2 cut(s)	5, 1118
Bso31I	GGTCTC	1 cut(s)	156
Bsp1286I	GDGCHC	1 cut(s)	817
Bsp143I	GATC	5 cut(s)	77, 176, 667, 1420, 1606
Bsp19I	CCATGG	2 cut(s)	352, 523
BspACI	CCGC	2 cut(s)	65, 965
BspANI	GGCC	2 cut(s)	5, 1118
BspCNI	CTCAG	1 cut(s)	1187
BspFNI	CGCG	1 cut(s)	413
BspHI	TCATGA	1 cut(s)	1620
BspLI	GGNNCC	5 cut(s)	468, 642, 669, 1263, 1608
BspMAI	CTGCAG	1 cut(s)	909
BspPI	GGATC	7 cut(s)	72, 184, 662, 675, 1415, 1601, 1614
BspTNI	GGTCTC	1 cut(s)	156
BsrDI	GCAATG	2 cut(s)	1263, 1284
BsrI	ACTGG	4 cut(s)	196, 1029, 1365, 1513
BssECI	CCNNGG	3 cut(s)	352, 523, 663
BssMI	GATC	5 cut(s)	77, 176, 667, 1420, 1606
BssSI	CACGAG	1 cut(s)	810
BssT1I	CCWWGG	2 cut(s)	352, 523
Bst2BI	CACGAG	1 cut(s)	810
Bst2UI	CCWGG	7 cut(s)	16, 401, 606, 665, 672, 678, 1629
Bst4CI	ACNGT	3 cut(s)	328, 1372, 1408
Bst6I	CTCTTC	2 cut(s)	159, 417
BstAPI	GCANNNNNTGC	4 cut(s)	779, 812, 974, 1253
BstBAI	YACGTR	1 cut(s)	1127
BstC8I	GCNNGC	1 cut(s)	1249
BstDEI	CTNAG	1 cut(s)	1174
BstDSI	CCRYGG	2 cut(s)	352, 523
BstF5I	GGATG	7 cut(s)	595, 620, 624, 967, 1033, 1294, 1354
BstFNI	CGCG	1 cut(s)	413
BstHHI	GCGC	1 cut(s)	415
BstKTI	GATC	5 cut(s)	80, 179, 670, 1423, 1609
BstMAI	GTCTC	3 cut(s)	156, 522, 770
BstMBI	GATC	5 cut(s)	77, 176, 667, 1420, 1606
BstMWI	GCNNNNNNNGC	7 cut(s)	170, 227, 779, 812, 974, 1244, 1253
BstNI	CCWGG	7 cut(s)	16, 401, 606, 665, 672, 678, 1629
BstNSI	RCATGY	4 cut(s)	547, 578, 1251, 1506
BstSCI	CCNGG	7 cut(s)	14, 399, 604, 663, 670, 676, 1627
BstSFI	CTRYAG	2 cut(s)	165, 905
BstUI	CGCG	1 cut(s)	413
BstV1I	GCAGC	3 cut(s)	144, 157, 839
BstV2I	GAAGAC	4 cut(s)	3, 806, 1200, 1583
BstX2I	RGATCY	2 cut(s)	667, 1606
BstYI	RGATCY	2 cut(s)	667, 1606
BsuRI	GGCC	2 cut(s)	5, 1118
BtgI	CCRYGG	2 cut(s)	352, 523
BtsCI	GGATG	7 cut(s)	595, 620, 624, 967, 1033, 1294, 1354
BtsIMutI	CAGTG	3 cut(s)	333, 933, 1413
Cac8I	GCNNGC	1 cut(s)	1249
CaiI	CAGNNNCTG	1 cut(s)	677
CciI	TCATGA	1 cut(s)	1620
CfoI	GCGC	1 cut(s)	415
Cfr13I	GGNCC	3 cut(s)	466, 674, 1332
CseI	GACGC	1 cut(s)	1341
CsiI	ACCWGGT	2 cut(s)	399, 676
Csp6I	GTAC	2 cut(s)	1298, 1506
CviQI	GTAC	2 cut(s)	1298, 1506
DdeI	CTNAG	1 cut(s)	1174
DpnI	GATC	5 cut(s)	79, 178, 669, 1422, 1608
DpnII	GATC	5 cut(s)	77, 176, 667, 1420, 1606
DraIII	CACNNNGTG	1 cut(s)	1408
DrdI	GACNNNNNNGTC	1 cut(s)	590
DseDI	GACNNNNNNGTC	1 cut(s)	590
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	159, 417
EarI	CTCTTC	2 cut(s)	159, 417
EciI	GGCGGA	1 cut(s)	54
Eco130I	CCWWGG	2 cut(s)	352, 523
Eco147I	AGGCCT	1 cut(s)	1118
Eco31I	GGTCTC	1 cut(s)	156
Eco32I	GATATC	1 cut(s)	1326
Eco47I	GGWCC	3 cut(s)	466, 674, 1332
Eco57I	CTGAAG	2 cut(s)	441, 909
Eco72I	CACGTG	1 cut(s)	1127
EcoO109I	RGGNCCY	2 cut(s)	466, 674
EcoRII	CCWGG	7 cut(s)	14, 399, 604, 663, 670, 676, 1627
EcoRV	GATATC	1 cut(s)	1326
EcoT14I	CCWWGG	2 cut(s)	352, 523
ErhI	CCWWGG	2 cut(s)	352, 523
FalI	AAGNNNNNCTT	2 cut(s)	858, 890
FaqI	GGGAC	2 cut(s)	260, 452
FauNDI	CATATG	1 cut(s)	481
Fnu4HI	GCNGC	4 cut(s)	133, 171, 828, 966
FokI	GGATG	7 cut(s)	602, 627, 631, 974, 1040, 1301, 1361
Fsp4HI	GCNGC	4 cut(s)	133, 171, 828, 966
GlaI	GCGC	1 cut(s)	414
GluI	GCNGC	4 cut(s)	133, 171, 828, 966
HaeIII	GGCC	2 cut(s)	5, 1118
HapII	CCGG	1 cut(s)	129
HgaI	GACGC	1 cut(s)	1341
HhaI	GCGC	1 cut(s)	415
Hin6I	GCGC	1 cut(s)	413
HinP1I	GCGC	1 cut(s)	413
HincII	GTYRAC	1 cut(s)	388
HindII	GTYRAC	1 cut(s)	388
HindIII	AAGCTT	2 cut(s)	567, 1634
HinfI	GANTC	2 cut(s)	1411, 1624
HpaII	CCGG	1 cut(s)	129
HphI	GGTGA	2 cut(s)	808, 1400
Hpy166II	GTNNAC	4 cut(s)	359, 388, 1130, 1298
Hpy188I	TCNGA	7 cut(s)	77, 421, 1149, 1162, 1177, 1288, 1357
Hpy188III	TCNNGA	5 cut(s)	395, 996, 1219, 1547, 1621
Hpy8I	GTNNAC	4 cut(s)	359, 388, 1130, 1298
Hpy99I	CGWCG	1 cut(s)	1446
HpyAV	CCTTC	8 cut(s)	94, 251, 295, 860, 960, 1225, 1490, 1653
HpyCH4III	ACNGT	3 cut(s)	328, 1372, 1408
HpyCH4IV	ACGT	2 cut(s)	709, 1126
HpyF10VI	GCNNNNNNNGC	7 cut(s)	170, 227, 779, 812, 974, 1244, 1253
HpyF3I	CTNAG	1 cut(s)	1174
HpySE526I	ACGT	2 cut(s)	709, 1126
HspAI	GCGC	1 cut(s)	413
Kzo9I	GATC	5 cut(s)	77, 176, 667, 1420, 1606
LmnI	GCTCC	5 cut(s)	226, 488, 622, 640, 1562
Lsp1109I	GCAGC	3 cut(s)	144, 157, 839
LweI	GCATC	3 cut(s)	815, 952, 1339
MabI	ACCWGGT	2 cut(s)	399, 676
MaeII	ACGT	2 cut(s)	709, 1126
MaeIII	GTNAC	3 cut(s)	452, 506, 892
MalI	GATC	5 cut(s)	79, 178, 669, 1422, 1608
MboI	GATC	5 cut(s)	77, 176, 667, 1420, 1606
MfeI	CAATTG	1 cut(s)	687
MflI	RGATCY	2 cut(s)	667, 1606
MhlI	GDGCHC	1 cut(s)	817
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MmeI	TCCRAC	1 cut(s)	134
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	627, 957, 1460
MslI	CAYNNNNRTG	4 cut(s)	326, 528, 542, 1386
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	1 cut(s)	129
MspR9I	CCNGG	7 cut(s)	16, 401, 606, 665, 672, 678, 1629
MunI	CAATTG	1 cut(s)	687
MvaI	CCWGG	7 cut(s)	16, 401, 606, 665, 672, 678, 1629
MvnI	CGCG	1 cut(s)	413
MwoI	GCNNNNNNNGC	7 cut(s)	170, 227, 779, 812, 974, 1244, 1253
NcoI	CCATGG	2 cut(s)	352, 523
NdeI	CATATG	1 cut(s)	481
NdeII	GATC	5 cut(s)	77, 176, 667, 1420, 1606
NlaIV	GGNNCC	5 cut(s)	468, 642, 669, 1263, 1608
NmuCI	GTSAC	2 cut(s)	452, 506
NspI	RCATGY	4 cut(s)	547, 578, 1251, 1506
PaeI	GCATGC	1 cut(s)	1251
PagI	TCATGA	1 cut(s)	1620
PceI	AGGCCT	1 cut(s)	1118
PciI	ACATGT	3 cut(s)	543, 574, 1502
PfeI	GAWTC	2 cut(s)	1411, 1624
PflMI	CCANNNNNTGG	3 cut(s)	485, 677, 1471
PfoI	TCCNGGA	2 cut(s)	670, 1627
PkrI	GCNGC	4 cut(s)	134, 172, 829, 967
PmaCI	CACGTG	1 cut(s)	1127
PmlI	CACGTG	1 cut(s)	1127
Ppu21I	YACGTR	1 cut(s)	1127
PpuMI	RGGWCCY	2 cut(s)	466, 674
PscI	ACATGT	3 cut(s)	543, 574, 1502
Psp5II	RGGWCCY	2 cut(s)	466, 674
Psp6I	CCWGG	7 cut(s)	14, 399, 604, 663, 670, 676, 1627
PspCI	CACGTG	1 cut(s)	1127
PspGI	CCWGG	7 cut(s)	14, 399, 604, 663, 670, 676, 1627
PspN4I	GGNNCC	5 cut(s)	468, 642, 669, 1263, 1608
PspPI	GGNCC	3 cut(s)	466, 674, 1332
PspPPI	RGGWCCY	2 cut(s)	466, 674
PstI	CTGCAG	1 cut(s)	909
PstNI	CAGNNNCTG	1 cut(s)	677
PsuI	RGATCY	2 cut(s)	667, 1606
RsaI	GTAC	2 cut(s)	1299, 1507
RsaNI	GTAC	2 cut(s)	1298, 1506
RseI	CAYNNNNRTG	4 cut(s)	326, 528, 542, 1386
SaqAI	TTAA	3 cut(s)	627, 957, 1460
SatI	GCNGC	4 cut(s)	133, 171, 828, 966
Sau3AI	GATC	5 cut(s)	77, 176, 667, 1420, 1606
Sau96I	GGNCC	3 cut(s)	466, 674, 1332
ScrFI	CCNGG	7 cut(s)	16, 401, 606, 665, 672, 678, 1629
SduI	GDGCHC	1 cut(s)	817
SexAI	ACCWGGT	2 cut(s)	399, 676
SfaNI	GCATC	3 cut(s)	815, 952, 1339
SfcI	CTRYAG	2 cut(s)	165, 905
SinI	GGWCC	3 cut(s)	466, 674, 1332
SmiMI	CAYNNNNRTG	4 cut(s)	326, 528, 542, 1386
SmlI	CTYRAG	1 cut(s)	767
SmoI	CTYRAG	1 cut(s)	767
SphI	GCATGC	1 cut(s)	1251
SseBI	AGGCCT	1 cut(s)	1118
SsiI	CCGC	2 cut(s)	65, 965
SspI	AATATT	2 cut(s)	923, 1054
StuI	AGGCCT	1 cut(s)	1118
StyD4I	CCNGG	7 cut(s)	14, 399, 604, 663, 670, 676, 1627
StyI	CCWWGG	2 cut(s)	352, 523
TaaI	ACNGT	3 cut(s)	328, 1372, 1408
TaiI	ACGT	2 cut(s)	712, 1129
TaqI	TCGA	6 cut(s)	238, 255, 501, 817, 1419, 1441
TatI	WGTACW	1 cut(s)	1505
TauI	GCSGC	1 cut(s)	968
TfiI	GAWTC	2 cut(s)	1411, 1624
Tru1I	TTAA	3 cut(s)	627, 957, 1460
Tru9I	TTAA	3 cut(s)	627, 957, 1460
TscAI	CASTG	3 cut(s)	333, 933, 1413
TseFI	GTSAC	2 cut(s)	452, 506
TseI	GCWGC	3 cut(s)	132, 170, 827
Tsp45I	GTSAC	2 cut(s)	452, 506
TspDTI	ATGAA	8 cut(s)	309, 569, 645, 1044, 1466, 1553, 1598, 1637
TspGWI	ACGGA	1 cut(s)	132
TspRI	CASTG	3 cut(s)	333, 933, 1413
Van91I	CCANNNNNTGG	3 cut(s)	485, 677, 1471
VpaK11BI	GGWCC	3 cut(s)	466, 674, 1332
XapI	RAATTY	2 cut(s)	912, 1069
XceI	RCATGY	4 cut(s)	547, 578, 1251, 1506
XcmI	CCANNNNNNNNNTGG	2 cut(s)	144, 1342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.