Rorug03G0229600

Homeodomain

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
21060722 .. 21063920
3199 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0229600.1

Sequence Viewer

Length: 2925 bp
ATGCCCACTCTGTTCCTCCATTTCTGCCTTTTCTTATTCATCACCACTGTTACTAACCTCATCCCCGCAGTTCACAGCAACTGTATTGAAGCCCAGCAACAATCATTGCTCCATTTCAAGAAAAATCTTGAATTTGATTCTTGCAAATCCTCCAAGCTTATCACATGGAATTCGAGTACCGAATGCTGTTCTTGGCTTGGTGTAACTTGCAGCACTATTGGGAGTGTTGTTGGTCTTGACATCAGCAGCGAGTCTATCTCATGCAGCATTGACAATTCAAGCAGTCTCTTTCAACTTCAACATCTTCAGAGCCTCAATTTGGCCGACAACAACTTCAAAAGCTCTTCAATTCCATCTGCAATTGGAAAGCTTACAGAGTTAAGGTATCTGAATTTAAGTGATGCTCTTTTTTCTGGGGTTATTCCCATTGAGATTTCACGCTTAACAAGGCTGACAACTCTTGATCTCTCTGATAATTCCTACCCCTCTTTTGCTGAGATCCAGAATTTAAGCATGCTAATTCAGAACCTCACAGAGCTTACAGAGGTATATCTTGATTCAGTAGTGCTATCACGACAGGGGAGTGACTGGTGTGAAGCCATATCTTCTTCGCTGCCAAATCTGAGGGTGTTGAGCTTGTCCGGTTGTCGTCTTTCAGGCCCTATATGTGACTCCCTTGCAAAGCTTCAATCTCTGCATGAGATTGACTTGTCACTTAATCAACTCGATGGGACTATTCCTTCATCTGTTGTCTCTCTTCCTAGACTGGAAACATTAACACTATCCCACAATCGGTTCTCGGGTCAAGTCCCTGAATTTTCCAATACCTCTTCGCACTTGCTTAACACCCTTGATTTGGAAAACAACAATTTGGAAGGACAAATACCAACATCTATCTTCAATCTTCAAGGGCTTACGTCTCTCCATCTTTCTTCAAATAACTTCAGTGGCTTCCCTTTTAATGGTCCTCAAGTGCCCAGAAGTCTTTCATTGGTTGATCTTTCCCACAATAGCTTGTTGTTTGATTACAATGGCACCAATTCCTCCTTCCTTCAGATTGACCATTTGGTATTGGCTTCTAACAAGTTGAGAGCATTCCCAGATTTCTTGAGAAACCAAATCACACTTAATATTTCGGATTTGGACCTTTCAAACAACCAGATCCAAGGCCAGATACCTAATTGGATTTTGAGTCTCAAATCTCTTAATTCTCTTGATCTTTCTGGCAACTCCTTAGTGACTCTAGAAGCTCCACTACGAAATTCTACCTATGTTCTGCCGTTAGTTGATCTTCATTCAAACCAGCTTCAGGGACAGATCCCCTTGTTCTTAAGTGGTGATTATATGGATTACTCGAGAAATAATTTCAACTCTGGTATACCGATTGACATTGGTGATTTCATTTCTACTAAGTCTTACCTTTCTCTTTCAAGCAATAACTTTCACGGGGCCATTCCAAAATCAATATGCAATGCAAGTGGTGTTGTTCTTGATCTGTCCAATAATTCCTTGAGTGGAAACATTCCCCAATGCTTGACTCAATCACATTCGCTTTTGGTCATTGATATGAGGAGAAACAACCTGAGTGGCACAATTCCTGATAATTTTCTCAAGGATTGTAAACTACGAACTCTCGACCTCAGCAACAATCAAATACAAGGCCAACTTCCGAAATCTCTTGTCAACTGCTCAAGGTTAGAGGTTTTAAACCTTGGAAACAATAACATAACTGATACTTTTCCATGCTTTTTGATGAGCATATCCACCTTGCGTGTCCTTGTTTTGCGGTCCAACAAGTTTTATGGAAGCATTGGATGTTCCAAGACCAATGGCACATGGCCTGTGCTTCAAATAATAGATTTAGCTCACAACAATTTCAGTGGTGATGTGCCAGGAAGAATGTCTCTGACATGGCAGGCTATGGTGTCTAAGGAGGATGATGATTCTCCAACTAACCTTGGATTTTCTTATAATCTGCCGGGCAGGTATTATAGAGATACAATTACGACTGGCTATACGACTGGAAATAATCTGCCGGGCAGTTATAATAGAGATACAATTACGACTGGCTATACGACTGGAAATAATCTGCCGGGCAGGTATGGTGGAAATACGAACAGGTATTGTAGAGATACAATTATGACTAGAAATAATCTGCCGGGCAGGTGTATTGGAGATAATGGAAATCCATCTATTGGATGTAATCATCGGTATGCTAGAGGTTATTCTCGGTATGTTACAGGCCCTAGCGTTTATTATACAAATGCAATTACGACTATCTTCAAAGGTTTAGAGTTGGATGTGGTTAAGATTCTAACTATATTCACCTTGATTGACTACTCCGCCAACAAATTCAATGGATCAATACCTGAGGAAATTGGAGAGTTGAAATCACTATATGTCCTCAACTTATCTGGTAATGCTTTTACAGGAAAAATCCCATCATCATTTGGTAAGATGCAACAACTGGAGTCCTTAGATCTCTCAAAGAACCACTTGAGCGGCCAAATTCCCCCACAGTTTGCAAATCTCACTTTCCTTGCATTCTTGGATCTCTCAAATAATGAACTGGTTGGGAAGATCCCAACCAGCACTCAAATTTCAACATTTCCAAATACCTCCTTCGAAGGTAACAAAGGATTATGGGGACCTCCTTTGACAGTGGATGCAGTATTGCCACCACCAATTTCAAATGGAAACTCAAGTCCTCCGAATTCTGGAGATGAGATTGATTGGGATGTTATTTGTGTTGAAATTGGATTTACCTGTGGGTTTGGAATTGCCATTGGGTCACTTTTGTTTTGCAAAAGATGGAGGAAATGGTATTACAGAGCTATGCGTGGTATTCTGTTCAAGATATTCCCTCAGCTAGAGCAGAGATTTGGTAATCATAGAAGACACGTGTTCATAAACACAAGGCGTTGA

Protein Analysis

974

Amino Acids

107.54

Weight (kDa)

6.24

Isoelectric Point (pI)

33.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 3.2e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 85 - 187 1.3e-09 Leucine-rich repeat region
LRR_8 PF13855 101 - 159 2e-06 Leucine rich repeat
LRR_8 PF13855 206 - 266 6.3e-08 Leucine rich repeat
LRR_8 PF13855 541 - 600 2e-07 Leucine rich repeat
LRR_4 PF12799 541 - 578 1.9e-07 Leucine Rich repeats (2 copies)
LRR_14 PF23598 788 - 853 6.1e-07 Leucine-rich repeat region
LRR_8 PF13855 798 - 857 1.7e-09 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1971, 2046
AarI CACCTGC 1 cut(s) 2154
Acc36I ACCTGC 3 cut(s) 1974, 2088, 2154
AccB1I GGYRCC 1 cut(s) 1034
AccB7I CCANNNNNTGG 1 cut(s) 2195
AccBSI CCGCTC 1 cut(s) 2502
AccI GTMKAC 1 cut(s) 1378
AciI CCGC 4 cut(s) 66, 1786, 2343, 2502
AclWI GGATC 6 cut(s) 493, 1156, 1312, 2368, 2559, 2575
AcoI YGGCCR 2 cut(s) 321, 2503
AcuI CTGAAG 4 cut(s) 290, 928, 1037, 1292
AcvI CACGTG 1 cut(s) 2902
AfaI GTAC 1 cut(s) 178
AfiI CCNNNNNNNGG 7 cut(s) 319, 792, 856, 962, 1309, 2195, 2717
AflII CTTAAG 1 cut(s) 1330
AflIII ACRYGT 2 cut(s) 2899, 2901
AjnI CCWGG 1 cut(s) 1891
AjuI GAANNNNNNNTTGG 2 cut(s) 1031, 1063
Alw26I GTCTC 5 cut(s) 290, 757, 924, 1199, 1908
AlwI GGATC 6 cut(s) 493, 1156, 1312, 2368, 2559, 2575
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 2 cut(s) 799, 1354
AoxI GGCC 8 cut(s) 321, 658, 1168, 1449, 1660, 1838, 2242, 2503
ApeKI GCWGC 4 cut(s) 210, 246, 264, 613
Asp700I GAANNNNTTC 1 cut(s) 985
AspS9I GGNCC 7 cut(s) 659, 965, 1144, 1449, 1788, 2243, 2648
AsuC2I CCSGG 4 cut(s) 1980, 2037, 2094, 2160
AsuHPI GGTGA 5 cut(s) 34, 1349, 1406, 1895, 2317
AsuII TTCGAA 1 cut(s) 2625
AvaI CYCGRG 2 cut(s) 799, 1354
AvaII GGWCC 4 cut(s) 965, 1144, 1788, 2648
AxyI CCTNAGG 1 cut(s) 2370
BaeGI GKGCMC 1 cut(s) 978
BanI GGYRCC 1 cut(s) 1034
BarI GAAGNNNNNNTAC 4 cut(s) 867, 899, 1239, 1271
BbrPI CACGTG 1 cut(s) 2902
BbsI GAAGAC 1 cut(s) 2902
BbvCI CCTCAGC 2 cut(s) 1640, 2865
BbvI GCAGC 4 cut(s) 222, 258, 276, 600
BccI CCATC 6 cut(s) 361, 722, 933, 2197, 2449, 2805
BceAI ACGGC 1 cut(s) 1264
BciT130I CCWGG 1 cut(s) 1893
BcnI CCSGG 4 cut(s) 1980, 2037, 2094, 2160
BcoDI GTCTC 5 cut(s) 290, 757, 924, 1199, 1908
BfaI CTAG 6 cut(s) 762, 1244, 2145, 2217, 2247, 2870
BfrI CTTAAG 1 cut(s) 1330
BfuAI ACCTGC 3 cut(s) 1974, 2088, 2154
BglII AGATCT 1 cut(s) 2479
BisI GCNGC 5 cut(s) 211, 247, 265, 614, 2503
BlsI GCNGC 5 cut(s) 212, 248, 266, 615, 2504
Bme1390I CCNGG 5 cut(s) 1893, 1980, 2037, 2094, 2160
Bme18I GGWCC 4 cut(s) 965, 1144, 1788, 2648
BmeT110I CYCGRG 2 cut(s) 799, 1354
BmgT120I GGNCC 7 cut(s) 659, 965, 1144, 1449, 1788, 2243, 2648
BmiI GGNNCC 3 cut(s) 1036, 1450, 2649
BmrFI CCNGG 5 cut(s) 1893, 1980, 2037, 2094, 2160
BmsI GCATC 3 cut(s) 391, 2448, 2656
BpiI GAAGAC 1 cut(s) 2902
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 2 cut(s) 2489, 2739
Bpu10I CCTNAGC 2 cut(s) 1640, 2865
Bpu14I TTCGAA 1 cut(s) 2625
BpuEI CTTGAG 7 cut(s) 954, 1129, 1531, 1595, 1675, 2518, 2686
BpuMI CCSGG 4 cut(s) 1980, 2037, 2094, 2160
BsaAI YACGTR 1 cut(s) 2902
BsaJI CCNNGG 3 cut(s) 1165, 1711, 1957
BsaWI WCCGGW 1 cut(s) 641
Bsc4I CCNNNNNNNGG 7 cut(s) 319, 792, 856, 962, 1309, 2195, 2717
Bse1I ACTGG 8 cut(s) 593, 771, 2014, 2026, 2071, 2083, 2472, 2574
Bse21I CCTNAGG 1 cut(s) 2370
Bse3DI GCAATG 2 cut(s) 104, 1477
BseBI CCWGG 1 cut(s) 1893
BseDI CCNNGG 3 cut(s) 1165, 1711, 1957
BseGI GGATG 7 cut(s) 60, 1820, 1942, 2204, 2305, 2671, 2743
BseLI CCNNNNNNNGG 7 cut(s) 319, 792, 856, 962, 1309, 2195, 2717
BseMI GCAATG 2 cut(s) 104, 1477
BseMII CTCAG 6 cut(s) 486, 614, 1574, 1654, 2361, 2879
BseNI ACTGG 8 cut(s) 593, 771, 2014, 2026, 2071, 2083, 2472, 2574
BseRI GAGGAG 1 cut(s) 1585
BseSI GKGCMC 1 cut(s) 978
BseXI GCAGC 4 cut(s) 222, 258, 276, 600
BseYI CCCAGC 1 cut(s) 93
BshFI GGCC 8 cut(s) 323, 660, 1170, 1451, 1662, 1840, 2244, 2505
BshNI GGYRCC 1 cut(s) 1034
BsiHKCI CYCGRG 2 cut(s) 799, 1354
BsiSI CCGG 5 cut(s) 642, 1979, 2036, 2093, 2159
BslFI GGGAC 4 cut(s) 745, 794, 1326, 2661
BslI CCNNNNNNNGG 7 cut(s) 319, 792, 856, 962, 1309, 2195, 2717
BsmAI GTCTC 5 cut(s) 290, 757, 924, 1199, 1908
BsmBI CGTCTC 1 cut(s) 924
BsmFI GGGAC 4 cut(s) 745, 794, 1326, 2661
BsmI GAATGC 3 cut(s) 188, 1094, 2543
BsnI GGCC 8 cut(s) 323, 660, 1170, 1451, 1662, 1840, 2244, 2505
BsoBI CYCGRG 2 cut(s) 799, 1354
Bsp119I TTCGAA 1 cut(s) 2625
Bsp1286I GDGCHC 1 cut(s) 978
BspACI CCGC 4 cut(s) 66, 1786, 2343, 2502
BspANI GGCC 8 cut(s) 323, 660, 1170, 1451, 1662, 1840, 2244, 2505
BspCNI CTCAG 6 cut(s) 487, 615, 1575, 1653, 2362, 2878
BspLI GGNNCC 3 cut(s) 1036, 1450, 2649
BspMI ACCTGC 3 cut(s) 1974, 2088, 2154
BspPI GGATC 6 cut(s) 493, 1156, 1312, 2368, 2559, 2575
BspQI GCTCTTC 1 cut(s) 349
BspT104I TTCGAA 1 cut(s) 2625
BspT107I GGYRCC 1 cut(s) 1034
BspTI CTTAAG 1 cut(s) 1330
BsrBI CCGCTC 1 cut(s) 2502
BsrDI GCAATG 2 cut(s) 104, 1477
BsrI ACTGG 8 cut(s) 593, 771, 2014, 2026, 2071, 2083, 2472, 2574
BssECI CCNNGG 3 cut(s) 1165, 1711, 1957
BssNAI GTATAC 1 cut(s) 1379
BssT1I CCWWGG 3 cut(s) 1165, 1711, 1957
Bst1107I GTATAC 1 cut(s) 1379
Bst2UI CCWGG 1 cut(s) 1893
Bst4CI ACNGT 4 cut(s) 49, 83, 2520, 2662
Bst6I CTCTTC 3 cut(s) 349, 762, 835
BstAFI CTTAAG 1 cut(s) 1330
BstBAI YACGTR 1 cut(s) 2902
BstBI TTCGAA 1 cut(s) 2625
BstC8I GCNNGC 2 cut(s) 515, 1917
BstF5I GGATG 7 cut(s) 60, 1820, 1942, 2204, 2305, 2671, 2743
BstMAI GTCTC 5 cut(s) 290, 757, 924, 1199, 1908
BstNI CCWGG 1 cut(s) 1893
BstNSI RCATGY 1 cut(s) 517
BstSCI CCNGG 5 cut(s) 1891, 1978, 2035, 2092, 2158
BstSLI GKGCMC 1 cut(s) 978
BstV1I GCAGC 4 cut(s) 222, 258, 276, 600
BstV2I GAAGAC 1 cut(s) 2902
BstX2I RGATCY 6 cut(s) 498, 1161, 1317, 2479, 2551, 2580
BstYI RGATCY 6 cut(s) 498, 1161, 1317, 2479, 2551, 2580
BstZ17I GTATAC 1 cut(s) 1379
Bsu36I CCTNAGG 1 cut(s) 2370
BsuRI GGCC 8 cut(s) 323, 660, 1170, 1451, 1662, 1840, 2244, 2505
BtsCI GGATG 7 cut(s) 60, 1820, 1942, 2204, 2305, 2671, 2743
BtsIMutI CAGTG 4 cut(s) 45, 952, 1885, 2667
BveI ACCTGC 3 cut(s) 1974, 2088, 2154
Cac8I GCNNGC 2 cut(s) 515, 1917
CaiI CAGNNNCTG 1 cut(s) 81
Cfr13I GGNCC 7 cut(s) 659, 965, 1144, 1449, 1788, 2243, 2648
Csp6I GTAC 1 cut(s) 177
CspCI CAANNNNNGTGG 6 cut(s) 1459, 1494, 1567, 1602, 1861, 1896
CviAII CATG 7 cut(s) 165, 261, 514, 698, 1743, 1836, 1911
CviQI GTAC 1 cut(s) 177
DraI TTTAAA 1 cut(s) 1707
EaeI YGGCCR 2 cut(s) 321, 2503
Eam1104I CTCTTC 3 cut(s) 349, 762, 835
EarI CTCTTC 3 cut(s) 349, 762, 835
EciI GGCGGA 1 cut(s) 2332
Eco130I CCWWGG 3 cut(s) 1165, 1711, 1957
Eco47I GGWCC 4 cut(s) 965, 1144, 1788, 2648
Eco57I CTGAAG 4 cut(s) 290, 928, 1037, 1292
Eco72I CACGTG 1 cut(s) 2902
Eco81I CCTNAGG 1 cut(s) 2370
Eco88I CYCGRG 2 cut(s) 799, 1354
EcoO109I RGGNCCY 3 cut(s) 659, 2243, 2648
EcoRI GAATTC 2 cut(s) 169, 2713
EcoRII CCWGG 1 cut(s) 1891
EcoT14I CCWWGG 3 cut(s) 1165, 1711, 1957
ErhI CCWWGG 3 cut(s) 1165, 1711, 1957
Esp3I CGTCTC 1 cut(s) 924
FaeI CATG 7 cut(s) 168, 264, 517, 701, 1746, 1839, 1914
FalI AAGNNNNNCTT 4 cut(s) 1650, 1682, 2480, 2512
FaqI GGGAC 4 cut(s) 745, 794, 1326, 2661
FatI CATG 7 cut(s) 164, 260, 513, 697, 1742, 1835, 1910
FauI CCCGC 1 cut(s) 73
FblI GTMKAC 1 cut(s) 1378
Fnu4HI GCNGC 5 cut(s) 211, 247, 265, 614, 2503
FokI GGATG 7 cut(s) 47, 1827, 1949, 2211, 2312, 2678, 2750
Fsp4HI GCNGC 5 cut(s) 211, 247, 265, 614, 2503
FspBI CTAG 6 cut(s) 762, 1244, 2145, 2217, 2247, 2870
GluI GCNGC 5 cut(s) 211, 247, 265, 614, 2503
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 2 cut(s) 2489, 2739
HaeIII GGCC 8 cut(s) 323, 660, 1170, 1451, 1662, 1840, 2244, 2505
HapII CCGG 5 cut(s) 642, 1979, 2036, 2093, 2159
Hin1II CATG 7 cut(s) 168, 264, 517, 701, 1746, 1839, 1914
HincII GTYRAC 1 cut(s) 1684
HindII GTYRAC 1 cut(s) 1684
HindIII AAGCTT 3 cut(s) 155, 368, 683
HpaII CCGG 5 cut(s) 642, 1979, 2036, 2093, 2159
HphI GGTGA 5 cut(s) 34, 1349, 1406, 1895, 2317
Hpy166II GTNNAC 4 cut(s) 73, 1379, 1622, 1684
Hpy8I GTNNAC 4 cut(s) 73, 1379, 1622, 1684
HpyAV CCTTC 6 cut(s) 750, 869, 1057, 1061, 2621, 2632
HpyCH4III ACNGT 4 cut(s) 49, 83, 2520, 2662
HpyCH4IV ACGT 2 cut(s) 917, 2901
HpySE526I ACGT 2 cut(s) 917, 2901
Hsp92II CATG 7 cut(s) 168, 264, 517, 701, 1746, 1839, 1914
LguI GCTCTTC 1 cut(s) 349
LmnI GCTCC 2 cut(s) 114, 1255
Lsp1109I GCAGC 4 cut(s) 222, 258, 276, 600
LweI GCATC 3 cut(s) 391, 2448, 2656
MaeI CTAG 6 cut(s) 762, 1244, 2145, 2217, 2247, 2870
MaeII ACGT 2 cut(s) 917, 2901
MaeIII GTNAC 9 cut(s) 49, 202, 584, 668, 711, 1237, 2236, 2630, 2790
MbiI CCGCTC 1 cut(s) 2502
MfeI CAATTG 1 cut(s) 360
MflI RGATCY 6 cut(s) 498, 1161, 1317, 2479, 2551, 2580
MhlI GDGCHC 1 cut(s) 978
MlyI GAGTC 6 cut(s) 260, 665, 1201, 1234, 1531, 2480
MmeI TCCRAC 3 cut(s) 1815, 1973, 2277
MroXI GAANNNNTTC 1 cut(s) 985
MslI CAYNNNNRTG 2 cut(s) 1565, 2211
MspCI CTTAAG 1 cut(s) 1330
MspI CCGG 5 cut(s) 642, 1979, 2036, 2093, 2159
MspR9I CCNGG 5 cut(s) 1893, 1980, 2037, 2094, 2160
MunI CAATTG 1 cut(s) 360
Mva1269I GAATGC 3 cut(s) 188, 1094, 2543
MvaI CCWGG 1 cut(s) 1893
NciI CCSGG 4 cut(s) 1980, 2037, 2094, 2160
NlaIII CATG 7 cut(s) 168, 264, 517, 701, 1746, 1839, 1914
NlaIV GGNNCC 3 cut(s) 1036, 1450, 2649
NmuCI GTSAC 5 cut(s) 584, 668, 711, 1237, 2790
NspI RCATGY 1 cut(s) 517
NspV TTCGAA 1 cut(s) 2625
PaeI GCATGC 1 cut(s) 517
PaeR7I CTCGAG 1 cut(s) 1354
PaqCI CACCTGC 1 cut(s) 2154
PciSI GCTCTTC 1 cut(s) 349
PctI GAATGC 3 cut(s) 188, 1094, 2543
PdmI GAANNNNTTC 1 cut(s) 985
PfeI GAWTC 4 cut(s) 137, 557, 1943, 2311
PflMI CCANNNNNTGG 1 cut(s) 2195
PkrI GCNGC 5 cut(s) 212, 248, 266, 615, 2504
PleI GAGTC 6 cut(s) 259, 665, 1200, 1234, 1531, 2479
PmaCI CACGTG 1 cut(s) 2902
PmlI CACGTG 1 cut(s) 2902
PpsI GAGTC 6 cut(s) 259, 665, 1200, 1234, 1531, 2479
Ppu21I YACGTR 1 cut(s) 2902
PpuMI RGGWCCY 1 cut(s) 2648
PsiI TTATAA 2 cut(s) 1971, 2046
Psp5II RGGWCCY 1 cut(s) 2648
Psp6I CCWGG 1 cut(s) 1891
PspCI CACGTG 1 cut(s) 2902
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 1 cut(s) 1891
PspN4I GGNNCC 3 cut(s) 1036, 1450, 2649
PspPI GGNCC 7 cut(s) 659, 965, 1144, 1449, 1788, 2243, 2648
PspPPI RGGWCCY 1 cut(s) 2648
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 6 cut(s) 498, 1161, 1317, 2479, 2551, 2580
RsaI GTAC 1 cut(s) 178
RsaNI GTAC 1 cut(s) 177
RseI CAYNNNNRTG 2 cut(s) 1565, 2211
SapI GCTCTTC 1 cut(s) 349
SatI GCNGC 5 cut(s) 211, 247, 265, 614, 2503
Sau96I GGNCC 7 cut(s) 659, 965, 1144, 1449, 1788, 2243, 2648
SchI GAGTC 6 cut(s) 260, 665, 1201, 1234, 1531, 2480
ScrFI CCNGG 5 cut(s) 1893, 1980, 2037, 2094, 2160
SduI GDGCHC 1 cut(s) 978
SfaNI GCATC 3 cut(s) 391, 2448, 2656
Sfr274I CTCGAG 1 cut(s) 1354
SfuI TTCGAA 1 cut(s) 2625
SinI GGWCC 4 cut(s) 965, 1144, 1788, 2648
SlaI CTCGAG 1 cut(s) 1354
SmiMI CAYNNNNRTG 2 cut(s) 1565, 2211
SmlI CTYRAG 9 cut(s) 969, 1108, 1330, 1354, 1510, 1610, 1690, 2497, 2701
SmoI CTYRAG 9 cut(s) 969, 1108, 1330, 1354, 1510, 1610, 1690, 2497, 2701
SphI GCATGC 1 cut(s) 517
SsiI CCGC 4 cut(s) 66, 1786, 2343, 2502
SspI AATATT 1 cut(s) 1132
SspMI CTAG 6 cut(s) 762, 1244, 2145, 2217, 2247, 2870
StyD4I CCNGG 5 cut(s) 1891, 1978, 2035, 2092, 2158
StyI CCWWGG 3 cut(s) 1165, 1711, 1957
TaaI ACNGT 4 cut(s) 49, 83, 2520, 2662
TaiI ACGT 2 cut(s) 920, 2904
TaqI TCGA 5 cut(s) 173, 726, 1355, 1635, 2625
TauI GCSGC 1 cut(s) 2505
TfiI GAWTC 4 cut(s) 137, 557, 1943, 2311
TscAI CASTG 4 cut(s) 52, 952, 1885, 2667
TseFI GTSAC 5 cut(s) 584, 668, 711, 1237, 2790
TseI GCWGC 4 cut(s) 210, 246, 264, 613
Tsp45I GTSAC 5 cut(s) 584, 668, 711, 1237, 2790
TspDTI ATGAA 7 cut(s) 28, 732, 978, 1283, 1390, 2580, 2896
TspRI CASTG 4 cut(s) 52, 952, 1885, 2667
Van91I CCANNNNNTGG 1 cut(s) 2195
Vha464I CTTAAG 1 cut(s) 1330
VpaK11BI GGWCC 4 cut(s) 965, 1144, 1788, 2648
XbaI TCTAGA 1 cut(s) 1243
XceI RCATGY 1 cut(s) 517
XhoI CTCGAG 1 cut(s) 1354
XmiI GTMKAC 1 cut(s) 1378
XmnI GAANNNNTTC 1 cut(s) 985
XspI CTAG 6 cut(s) 762, 1244, 2145, 2217, 2247, 2870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.