MFP1 attachment factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008642 RLG00000008921 RLG00000009136 |
| rosa_multiflora | Rmu_sc0000771.1_g000001 Rmu_sc0013495.1_g000001 Rmu_sc0038964.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00352060 Rroxscaffold_5G00354130 |
| rosa_rugosa | Rorug04G0075600 Rorug04G0095200 |
| rosa_samantha | Rh4AG120400 Rh4BG142400 Rh4BG156300 Rh4BG156400 Rh4CG128600 Rh4DG113000 Rh4DG116400 Rh4DG138400 Rh4DG150400 Rh4DG150600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1227 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 159, 565 |
| AccII | CGCG | 1 cut(s) | 65 |
| AciI | CCGC | 8 cut(s) | 60, 63, 65, 196, 549, 575, 610, 676 |
| AcoI | YGGCCR | 1 cut(s) | 1266 |
| AcsI | RAATTY | 3 cut(s) | 602, 899, 1004 |
| AcuI | CTGAAG | 1 cut(s) | 413 |
| AcyI | GRCGYC | 1 cut(s) | 746 |
| AdeI | CACNNNGTG | 1 cut(s) | 700 |
| AfaI | GTAC | 2 cut(s) | 670, 798 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 159, 188, 565, 587 |
| AgsI | TTSAA | 2 cut(s) | 364, 421 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 967 |
| AjnI | CCWGG | 3 cut(s) | 696, 758, 1207 |
| AluBI | AGCT | 4 cut(s) | 48, 122, 839, 1325 |
| AluI | AGCT | 4 cut(s) | 48, 122, 839, 1325 |
| Alw21I | GWGCWC | 1 cut(s) | 696 |
| Alw26I | GTCTC | 7 cut(s) | 143, 232, 374, 713, 737, 820, 1310 |
| Alw44I | GTGCAC | 1 cut(s) | 692 |
| Ama87I | CYCGRG | 2 cut(s) | 182, 740 |
| AoxI | GGCC | 2 cut(s) | 442, 1266 |
| ApaLI | GTGCAC | 1 cut(s) | 692 |
| ApeKI | GCWGC | 2 cut(s) | 839, 1082 |
| ApoI | RAATTY | 3 cut(s) | 602, 899, 1004 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 90, 105 |
| AspS9I | GGNCC | 1 cut(s) | 763 |
| AsuHPI | GGTGA | 4 cut(s) | 30, 185, 253, 941 |
| AvaI | CYCGRG | 2 cut(s) | 182, 740 |
| AvaII | GGWCC | 1 cut(s) | 763 |
| BaeGI | GKGCMC | 2 cut(s) | 696, 859 |
| BalI | TGGCCA | 1 cut(s) | 1268 |
| BbsI | GAAGAC | 2 cut(s) | 17, 487 |
| Bbv12I | GWGCWC | 1 cut(s) | 696 |
| BbvI | GCAGC | 2 cut(s) | 826, 1069 |
| BccI | CCATC | 6 cut(s) | 43, 295, 348, 503, 776, 1015 |
| BceAI | ACGGC | 1 cut(s) | 821 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 586, 620 |
| BciT130I | CCWGG | 3 cut(s) | 698, 760, 1209 |
| BciVI | GTATCC | 1 cut(s) | 869 |
| BclI | TGATCA | 3 cut(s) | 904, 931, 1102 |
| BcoDI | GTCTC | 7 cut(s) | 143, 232, 374, 713, 737, 820, 1310 |
| BfaI | CTAG | 1 cut(s) | 1286 |
| BfuI | GTATCC | 1 cut(s) | 869 |
| BisI | GCNGC | 3 cut(s) | 63, 840, 1083 |
| BlsI | GCNGC | 3 cut(s) | 64, 841, 1084 |
| BmcAI | AGTACT | 1 cut(s) | 670 |
| Bme1390I | CCNGG | 3 cut(s) | 698, 760, 1209 |
| Bme18I | GGWCC | 1 cut(s) | 763 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 967 |
| BmeT110I | CYCGRG | 2 cut(s) | 182, 740 |
| BmgT120I | GGNCC | 1 cut(s) | 763 |
| BmiI | GGNNCC | 1 cut(s) | 764 |
| BmrFI | CCNGG | 3 cut(s) | 698, 760, 1209 |
| BmsI | GCATC | 1 cut(s) | 156 |
| BpiI | GAAGAC | 2 cut(s) | 17, 487 |
| BpmI | CTGGAG | 1 cut(s) | 742 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1068 |
| BsaHI | GRCGYC | 1 cut(s) | 746 |
| BsaJI | CCNNGG | 5 cut(s) | 63, 394, 581, 759, 1090 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 159, 188, 565, 587 |
| Bse1I | ACTGG | 1 cut(s) | 877 |
| Bse3DI | GCAATG | 1 cut(s) | 445 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1068 |
| BseBI | CCWGG | 3 cut(s) | 698, 760, 1209 |
| BseDI | CCNNGG | 5 cut(s) | 63, 394, 581, 759, 1090 |
| BseGI | GGATG | 1 cut(s) | 787 |
| BseJI | GATNNNNATC | 1 cut(s) | 1068 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 159, 188, 565, 587 |
| BseMI | GCAATG | 1 cut(s) | 445 |
| BseMII | CTCAG | 2 cut(s) | 35, 708 |
| BseNI | ACTGG | 1 cut(s) | 877 |
| BseRI | GAGGAG | 1 cut(s) | 43 |
| BseSI | GKGCMC | 2 cut(s) | 696, 859 |
| BseXI | GCAGC | 2 cut(s) | 826, 1069 |
| BseYI | CCCAGC | 1 cut(s) | 587 |
| Bsh1236I | CGCG | 1 cut(s) | 65 |
| Bsh1285I | CGRYCG | 1 cut(s) | 403 |
| BshFI | GGCC | 2 cut(s) | 444, 1268 |
| BsiEI | CGRYCG | 1 cut(s) | 403 |
| BsiHKAI | GWGCWC | 1 cut(s) | 696 |
| BsiHKCI | CYCGRG | 2 cut(s) | 182, 740 |
| BslFI | GGGAC | 1 cut(s) | 776 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 159, 188, 565, 587 |
| BsmAI | GTCTC | 7 cut(s) | 143, 232, 374, 713, 737, 820, 1310 |
| BsmBI | CGTCTC | 3 cut(s) | 143, 737, 820 |
| BsmFI | GGGAC | 1 cut(s) | 776 |
| BsmI | GAATGC | 2 cut(s) | 456, 1085 |
| BsnI | GGCC | 2 cut(s) | 444, 1268 |
| BsoBI | CYCGRG | 2 cut(s) | 182, 740 |
| Bsp1286I | GDGCHC | 2 cut(s) | 696, 859 |
| Bsp143I | GATC | 7 cut(s) | 125, 400, 725, 904, 931, 1063, 1102 |
| BspACI | CCGC | 8 cut(s) | 60, 63, 65, 196, 549, 575, 610, 676 |
| BspANI | GGCC | 2 cut(s) | 444, 1268 |
| BspCNI | CTCAG | 2 cut(s) | 36, 709 |
| BspFNI | CGCG | 1 cut(s) | 65 |
| BspLI | GGNNCC | 1 cut(s) | 764 |
| BspQI | GCTCTTC | 1 cut(s) | 576 |
| BsrDI | GCAATG | 1 cut(s) | 445 |
| BsrI | ACTGG | 1 cut(s) | 877 |
| BssECI | CCNNGG | 5 cut(s) | 63, 394, 581, 759, 1090 |
| BssMI | GATC | 7 cut(s) | 125, 400, 725, 904, 931, 1063, 1102 |
| BssNI | GRCGYC | 1 cut(s) | 746 |
| BssT1I | CCWWGG | 1 cut(s) | 394 |
| Bst2UI | CCWGG | 3 cut(s) | 698, 760, 1209 |
| Bst4CI | ACNGT | 1 cut(s) | 73 |
| Bst6I | CTCTTC | 2 cut(s) | 576, 970 |
| BstACI | GRCGYC | 1 cut(s) | 746 |
| BstC8I | GCNNGC | 2 cut(s) | 120, 680 |
| BstDEI | CTNAG | 5 cut(s) | 44, 665, 717, 888, 1232 |
| BstDSI | CCRYGG | 2 cut(s) | 63, 1090 |
| BstEII | GGTNACC | 1 cut(s) | 191 |
| BstF5I | GGATG | 1 cut(s) | 787 |
| BstFNI | CGCG | 1 cut(s) | 65 |
| BstKTI | GATC | 7 cut(s) | 128, 403, 728, 907, 934, 1066, 1105 |
| BstMAI | GTCTC | 7 cut(s) | 143, 232, 374, 713, 737, 820, 1310 |
| BstMBI | GATC | 7 cut(s) | 125, 400, 725, 904, 931, 1063, 1102 |
| BstMCI | CGRYCG | 1 cut(s) | 403 |
| BstNI | CCWGG | 3 cut(s) | 698, 760, 1209 |
| BstPI | GGTNACC | 1 cut(s) | 191 |
| BstSCI | CCNGG | 3 cut(s) | 696, 758, 1207 |
| BstSLI | GKGCMC | 2 cut(s) | 696, 859 |
| BstUI | CGCG | 1 cut(s) | 65 |
| BstV1I | GCAGC | 2 cut(s) | 826, 1069 |
| BstV2I | GAAGAC | 2 cut(s) | 17, 487 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1208 |
| BsuI | GTATCC | 1 cut(s) | 869 |
| BsuRI | GGCC | 2 cut(s) | 444, 1268 |
| BtgI | CCRYGG | 2 cut(s) | 63, 1090 |
| BtsCI | GGATG | 1 cut(s) | 787 |
| BtsI | GCAGTG | 2 cut(s) | 330, 799 |
| BtsIMutI | CAGTG | 3 cut(s) | 41, 330, 799 |
| Cac8I | GCNNGC | 2 cut(s) | 120, 680 |
| Cfr13I | GGNCC | 1 cut(s) | 763 |
| Cfr42I | CCGCGG | 1 cut(s) | 66 |
| CseI | GACGC | 1 cut(s) | 754 |
| CsiI | ACCWGGT | 1 cut(s) | 696 |
| Csp6I | GTAC | 2 cut(s) | 669, 797 |
| CviAII | CATG | 5 cut(s) | 320, 1015, 1058, 1202, 1312 |
| CviQI | GTAC | 2 cut(s) | 669, 797 |
| DdeI | CTNAG | 5 cut(s) | 44, 665, 717, 888, 1232 |
| DpnI | GATC | 7 cut(s) | 127, 402, 727, 906, 933, 1065, 1104 |
| DpnII | GATC | 7 cut(s) | 125, 400, 725, 904, 931, 1063, 1102 |
| DraIII | CACNNNGTG | 1 cut(s) | 700 |
| DriI | GACNNNNNGTC | 1 cut(s) | 967 |
| EaeI | YGGCCR | 1 cut(s) | 1266 |
| Eam1104I | CTCTTC | 2 cut(s) | 576, 970 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 967 |
| EarI | CTCTTC | 2 cut(s) | 576, 970 |
| EciI | GGCGGA | 2 cut(s) | 49, 564 |
| Eco130I | CCWWGG | 1 cut(s) | 394 |
| Eco47I | GGWCC | 1 cut(s) | 763 |
| Eco57I | CTGAAG | 1 cut(s) | 413 |
| Eco88I | CYCGRG | 2 cut(s) | 182, 740 |
| Eco91I | GGTNACC | 1 cut(s) | 191 |
| EcoO109I | RGGNCCY | 1 cut(s) | 763 |
| EcoO65I | GGTNACC | 1 cut(s) | 191 |
| EcoRI | GAATTC | 1 cut(s) | 602 |
| EcoRII | CCWGG | 3 cut(s) | 696, 758, 1207 |
| EcoT14I | CCWWGG | 1 cut(s) | 394 |
| EcoT22I | ATGCAT | 1 cut(s) | 149 |
| ErhI | CCWWGG | 1 cut(s) | 394 |
| Esp3I | CGTCTC | 3 cut(s) | 143, 737, 820 |
| FaeI | CATG | 5 cut(s) | 323, 1018, 1061, 1205, 1315 |
| FaqI | GGGAC | 1 cut(s) | 776 |
| FatI | CATG | 5 cut(s) | 319, 1014, 1057, 1201, 1311 |
| FauI | CCCGC | 2 cut(s) | 556, 683 |
| FauNDI | CATATG | 1 cut(s) | 1255 |
| FbaI | TGATCA | 3 cut(s) | 904, 931, 1102 |
| Fnu4HI | GCNGC | 3 cut(s) | 63, 840, 1083 |
| FokI | GGATG | 1 cut(s) | 794 |
| Fsp4HI | GCNGC | 3 cut(s) | 63, 840, 1083 |
| FspBI | CTAG | 1 cut(s) | 1286 |
| GluI | GCNGC | 3 cut(s) | 63, 840, 1083 |
| GsaI | CCCAGC | 1 cut(s) | 591 |
| GsuI | CTGGAG | 1 cut(s) | 742 |
| HaeIII | GGCC | 2 cut(s) | 444, 1268 |
| HgaI | GACGC | 1 cut(s) | 754 |
| Hin1I | GRCGYC | 1 cut(s) | 746 |
| Hin1II | CATG | 5 cut(s) | 323, 1018, 1061, 1205, 1315 |
| HincII | GTYRAC | 1 cut(s) | 31 |
| HindII | GTYRAC | 1 cut(s) | 31 |
| HinfI | GANTC | 7 cut(s) | 27, 424, 721, 812, 845, 923, 962 |
| HphI | GGTGA | 4 cut(s) | 30, 185, 253, 941 |
| Hpy166II | GTNNAC | 5 cut(s) | 31, 694, 703, 797, 1261 |
| Hpy188I | TCNGA | 4 cut(s) | 405, 582, 718, 897 |
| Hpy188III | TCNNGA | 2 cut(s) | 740, 742 |
| Hpy8I | GTNNAC | 5 cut(s) | 31, 694, 703, 797, 1261 |
| Hpy99I | CGWCG | 1 cut(s) | 77 |
| HpyAV | CCTTC | 5 cut(s) | 116, 274, 335, 370, 642 |
| HpyCH4III | ACNGT | 1 cut(s) | 73 |
| HpyCH4IV | ACGT | 1 cut(s) | 705 |
| HpyCH4V | TGCA | 7 cut(s) | 147, 438, 456, 694, 775, 802, 1085 |
| HpyF3I | CTNAG | 5 cut(s) | 44, 665, 717, 888, 1232 |
| HpySE526I | ACGT | 1 cut(s) | 705 |
| Hsp92I | GRCGYC | 1 cut(s) | 746 |
| Hsp92II | CATG | 5 cut(s) | 323, 1018, 1061, 1205, 1315 |
| Ksp22I | TGATCA | 3 cut(s) | 904, 931, 1102 |
| KspI | CCGCGG | 1 cut(s) | 66 |
| Kzo9I | GATC | 7 cut(s) | 125, 400, 725, 904, 931, 1063, 1102 |
| LguI | GCTCTTC | 1 cut(s) | 576 |
| LmnI | GCTCC | 1 cut(s) | 789 |
| Lsp1109I | GCAGC | 2 cut(s) | 826, 1069 |
| LweI | GCATC | 1 cut(s) | 156 |
| MabI | ACCWGGT | 1 cut(s) | 696 |
| MaeI | CTAG | 1 cut(s) | 1286 |
| MaeII | ACGT | 1 cut(s) | 705 |
| MaeIII | GTNAC | 2 cut(s) | 191, 868 |
| MalI | GATC | 7 cut(s) | 127, 402, 727, 906, 933, 1065, 1104 |
| MboI | GATC | 7 cut(s) | 125, 400, 725, 904, 931, 1063, 1102 |
| MfeI | CAATTG | 1 cut(s) | 685 |
| MhlI | GDGCHC | 2 cut(s) | 696, 859 |
| MlsI | TGGCCA | 1 cut(s) | 1268 |
| MluCI | AATT | 7 cut(s) | 560, 602, 685, 899, 1004, 1096, 1300 |
| MluNI | TGGCCA | 1 cut(s) | 1268 |
| MlyI | GAGTC | 4 cut(s) | 36, 715, 932, 956 |
| MmeI | TCCRAC | 1 cut(s) | 579 |
| Mox20I | TGGCCA | 1 cut(s) | 1268 |
| Mph1103I | ATGCAT | 1 cut(s) | 149 |
| MroXI | GAANNNNTTC | 2 cut(s) | 90, 105 |
| MscI | TGGCCA | 1 cut(s) | 1268 |
| MseI | TTAA | 4 cut(s) | 381, 1068, 1248, 1272 |
| MslI | CAYNNNNRTG | 2 cut(s) | 780, 1019 |
| Msp20I | TGGCCA | 1 cut(s) | 1268 |
| MspA1I | CMGCKG | 1 cut(s) | 65 |
| MspR9I | CCNGG | 3 cut(s) | 698, 760, 1209 |
| MunI | CAATTG | 1 cut(s) | 685 |
| Mva1269I | GAATGC | 2 cut(s) | 456, 1085 |
| MvaI | CCWGG | 3 cut(s) | 698, 760, 1209 |
| MvnI | CGCG | 1 cut(s) | 65 |
| NdeI | CATATG | 1 cut(s) | 1255 |
| NdeII | GATC | 7 cut(s) | 125, 400, 725, 904, 931, 1063, 1102 |
| NlaIII | CATG | 5 cut(s) | 323, 1018, 1061, 1205, 1315 |
| NlaIV | GGNNCC | 1 cut(s) | 764 |
| NmuCI | GTSAC | 1 cut(s) | 191 |
| NsiI | ATGCAT | 1 cut(s) | 149 |
| PaeR7I | CTCGAG | 1 cut(s) | 740 |
| PciSI | GCTCTTC | 1 cut(s) | 576 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 81, 396 |
| PctI | GAATGC | 2 cut(s) | 456, 1085 |
| PdmI | GAANNNNTTC | 2 cut(s) | 90, 105 |
| PfeI | GAWTC | 3 cut(s) | 424, 812, 845 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 159, 565 |
| PkrI | GCNGC | 3 cut(s) | 64, 841, 1084 |
| Ple19I | CGATCG | 1 cut(s) | 403 |
| PleI | GAGTC | 4 cut(s) | 35, 715, 931, 956 |
| PpsI | GAGTC | 4 cut(s) | 35, 715, 931, 956 |
| PpuMI | RGGWCCY | 1 cut(s) | 763 |
| PsiI | TTATAA | 1 cut(s) | 1227 |
| Psp5II | RGGWCCY | 1 cut(s) | 763 |
| Psp6I | CCWGG | 3 cut(s) | 696, 758, 1207 |
| PspEI | GGTNACC | 1 cut(s) | 191 |
| PspFI | CCCAGC | 1 cut(s) | 587 |
| PspGI | CCWGG | 3 cut(s) | 696, 758, 1207 |
| PspN4I | GGNNCC | 1 cut(s) | 764 |
| PspPI | GGNCC | 1 cut(s) | 763 |
| PspPPI | RGGWCCY | 1 cut(s) | 763 |
| PvuI | CGATCG | 1 cut(s) | 403 |
| RsaI | GTAC | 2 cut(s) | 670, 798 |
| RsaNI | GTAC | 2 cut(s) | 669, 797 |
| RseI | CAYNNNNRTG | 2 cut(s) | 780, 1019 |
| SacII | CCGCGG | 1 cut(s) | 66 |
| SapI | GCTCTTC | 1 cut(s) | 576 |
| SaqAI | TTAA | 4 cut(s) | 381, 1068, 1248, 1272 |
| SatI | GCNGC | 3 cut(s) | 63, 840, 1083 |
| Sau3AI | GATC | 7 cut(s) | 125, 400, 725, 904, 931, 1063, 1102 |
| Sau96I | GGNCC | 1 cut(s) | 763 |
| ScaI | AGTACT | 1 cut(s) | 670 |
| SchI | GAGTC | 4 cut(s) | 36, 715, 932, 956 |
| ScrFI | CCNGG | 3 cut(s) | 698, 760, 1209 |
| SduI | GDGCHC | 2 cut(s) | 696, 859 |
| SexAI | ACCWGGT | 1 cut(s) | 696 |
| SfaNI | GCATC | 1 cut(s) | 156 |
| Sfr274I | CTCGAG | 1 cut(s) | 740 |
| Sfr303I | CCGCGG | 1 cut(s) | 66 |
| SgrBI | CCGCGG | 1 cut(s) | 66 |
| SinI | GGWCC | 1 cut(s) | 763 |
| SlaI | CTCGAG | 1 cut(s) | 740 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 780, 1019 |
| SmlI | CTYRAG | 1 cut(s) | 740 |
| SmoI | CTYRAG | 1 cut(s) | 740 |
| Sse9I | AATT | 7 cut(s) | 560, 602, 685, 899, 1004, 1096, 1300 |
| SsiI | CCGC | 8 cut(s) | 60, 63, 65, 196, 549, 575, 610, 676 |
| SspMI | CTAG | 1 cut(s) | 1286 |
| StyD4I | CCNGG | 3 cut(s) | 696, 758, 1207 |
| StyI | CCWWGG | 1 cut(s) | 394 |
| TaaI | ACNGT | 1 cut(s) | 73 |
| TaiI | ACGT | 1 cut(s) | 708 |
| TaqI | TCGA | 4 cut(s) | 84, 124, 724, 741 |
| TaqII | GACCGA | 1 cut(s) | 179 |
| TasI | AATT | 7 cut(s) | 560, 602, 685, 899, 1004, 1096, 1300 |
| TatI | WGTACW | 2 cut(s) | 668, 796 |
| TauI | GCSGC | 1 cut(s) | 65 |
| TfiI | GAWTC | 3 cut(s) | 424, 812, 845 |
| Tru1I | TTAA | 4 cut(s) | 381, 1068, 1248, 1272 |
| Tru9I | TTAA | 4 cut(s) | 381, 1068, 1248, 1272 |
| TscAI | CASTG | 3 cut(s) | 48, 337, 799 |
| TseFI | GTSAC | 1 cut(s) | 191 |
| TseI | GCWGC | 2 cut(s) | 839, 1082 |
| Tsp45I | GTSAC | 1 cut(s) | 191 |
| TspDTI | ATGAA | 3 cut(s) | 256, 804, 1176 |
| TspGWI | ACGGA | 1 cut(s) | 1079 |
| TspRI | CASTG | 3 cut(s) | 48, 337, 799 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 159, 565 |
| VneI | GTGCAC | 1 cut(s) | 692 |
| VpaK11BI | GGWCC | 1 cut(s) | 763 |
| XapI | RAATTY | 3 cut(s) | 602, 899, 1004 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 562 |
| XhoI | CTCGAG | 1 cut(s) | 740 |
| XmnI | GAANNNNTTC | 2 cut(s) | 90, 105 |
| XspI | CTAG | 1 cut(s) | 1286 |
| ZrmI | AGTACT | 1 cut(s) | 670 |
| Zsp2I | ATGCAT | 1 cut(s) | 149 |