Rorug04G0267800

L-tryptophan--pyruvate aminotransferase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0007287
Physical Location & Seq
Reverse (-)
44048359 .. 44050727
2369 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0267800.1

Sequence Viewer

Length: 1785 bp
ATGGGCGTCCCTGGAGGTAATAAGAGGATCATAATCATTACGGTCTCTTCGGCGCTTCTGGTGGCCATGGTGGTCGGTGCGGTGGTTGGTGTGATCCAATACAAAAAACAGGAGCAACGCGGAGGAGGAGGAGGAGGAGGCGGAGACGGAGACGGAGACGGAGACTCTAAACCCGGAGATAAAAACGCCGTCCGTACATCAAAGCCAATTGTAGCCATTTGCCAGCCCACCAACTACAAACAAGAATGTGAGAATAGTCTGCAAAAGGAGGCCGGAGACAAAAGAGACCCGAAAGACCTCGCAAGAGTGGGGATACAGGTGGCCATTAACAAACTGGATGAGGCTATAAGGAACTCCAAAACCTTGCCAGATCAGGCCAAAGATCCCATGACCAAACAAGCTCTACATATCTGCAACCAGCTGTTGAATGCTTCTATGTACGATTTGAAAATTTCTTTCAATAAAATGGGTGCATTAGATCTCGAAAAGGTTGATGAATACGCGGAAGATGTTGAGGTTTGGCTGAGTGGGGCTGTCAGTCACCAAGCGACTTGCATTGATGAATCTCAGAACACAACCGAAGATGTCGGCAAGAAAATGAAGGAAATTTTGAAGTCAGCTCATGAAAGCACTAGCAATGCACTTGCCATGGTCACCGAAATCACTAACGCCTTGAACTCTCTTCATTTTAAATCGAACCGACGCCGGCTCCTGGCCTCATCGCCGCCATCCAAGAATAACAACAATAATAAGAATAATCAACACAAGCAGAATGGCAACAAAAGTAATCAGGGTCTCCCTTCTTGGCTCACTGATCGTAAGTTGGATCTTCTGACAGCTACGCCTGAAACCCTTAAGCCCAACGTGACGGTGGCTCAAGATGGGAACAGTAAGTATAAAACCATCAACGAAGCTTTGAAACTGGTCCCAAAGAAGAGCAACGACTTGTTTGTGATTTACGTGAAGGAGGGAGTGTACAAAGAAAGTGTGACGGTTGCAGGTATGATGGAAAATGTTGTGATGATTGGTGATGGCCCTACTAAGTCCAGGATCTCCGGTGACAATAACTTTGCTAGCGGAACCAGAACTATGTACACTGCAACAGTTGCTGTAGTTGGAAATTTTTTTGTTGCCAAGGACATAGGGTTTGAGAACACAGCCGGAGCGAAAGGGCACCAAGCGGTGGCACTGCGTGTTCAATCGGACTTCTCCATCTTCTACAACTGCCACATTGACGGGTACCAAAACACCCTATACGTCCAAGCCTACAGGAATTACTTCCGCGACTGCAACATCACTGGCACCATTGACTTCATCTTCGGTGACGCTGTCTCGCTCTTCCAGAACTGCGAGATTGTGGTGAGGAAGCCAATGGACAATCAGACCTGCATCGTCACTGCCCAAGGAAAGACAGACAAGAATGAGGTCACCGGCATCGTGCTCCAAAACTGCACCATCAGAGGCGACCCAGAGTACGAGAACAAGGGATACCTAGGTCGGCCATGGAAGAATTTCGCAAAAACCGTCGTCATGCAGTCACAGATTGATGATGTGATTCAACCTGAAGGGTACATGCCTTGGGACGGCGCCAAGTTCCACATGACGTCATTTTTCGGGGAGTACGACAACAGGGGACCTGGCGCTGACATGTCCAGCAGAGCCGGATGGCCTAGCATCAAAAAGCTTGATGATAAACAAGCTAAAGCCTACAGCGGTAAAAAGTGGTTTGAGGGTGATAGGTGGGTTAAGCCCAGCGGGGTCCCTTTTGTTTCTGGCATCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004021 GO:0004838 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006725 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0008483 GO:0008793 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009607 GO:0009617 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009641 GO:0009653 GO:0009683 GO:0009684 GO:0009719 GO:0009723 GO:0009725 GO:0009791 GO:0009850 GO:0009851 GO:0009888 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010074 GO:0010078 GO:0010087 GO:0010326 GO:0010817 GO:0016053 GO:0016740 GO:0016769 GO:0018130 GO:0019438 GO:0019752 GO:0019827 GO:0019842 GO:0022414 GO:0022622 GO:0030170 GO:0032501 GO:0032502 GO:0032787 GO:0034641 GO:0034754 GO:0036094 GO:0042221 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0043436 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046394 GO:0046483 GO:0047312 GO:0047635 GO:0048037 GO:0048364 GO:0048366 GO:0048367 GO:0048438 GO:0048467 GO:0048507 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050048 GO:0050362 GO:0050662 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070279 GO:0070529 GO:0070546 GO:0070547 GO:0070548 GO:0071704 GO:0072330 GO:0080097 GO:0080098 GO:0080099 GO:0080100 GO:0080130 GO:0090567 GO:0097159 GO:0098542 GO:0098727 GO:0099402 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1905392
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
Alliinase_C

Protein Analysis

594

Amino Acids

65.18

Weight (kDa)

8.58

Isoelectric Point (pI)

32.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 70 - 217 5.5e-25 Plant invertase/pectin methylesterase inhibitor
Pectinesterase PF01095 288 - 579 3.9e-122 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1607
Acc36I ACCTGC 2 cut(s) 989, 1394
Acc65I GGTACC 1 cut(s) 1239
AccB1I GGYRCC 4 cut(s) 1173, 1239, 1301, 1586
AccB7I CCANNNNNTGG 1 cut(s) 1183
AccII CGCG 3 cut(s) 120, 503, 1284
AclWI GGATC 5 cut(s) 35, 88, 377, 834, 1058
AcoI YGGCCR 3 cut(s) 63, 321, 1499
AcsI RAATTY 4 cut(s) 450, 606, 1120, 1510
AcuI CTGAAG 1 cut(s) 1584
AcyI GRCGYC 4 cut(s) 6, 703, 1587, 1604
AdeI CACNNNGTG 1 cut(s) 1193
AfaI GTAC 8 cut(s) 196, 440, 977, 1094, 1241, 1475, 1571, 1622
AfiI CCNNNNNNNGG 3 cut(s) 712, 1183, 1583
AflII CTTAAG 1 cut(s) 854
AflIII ACRYGT 1 cut(s) 1647
AgsI TTSAA 8 cut(s) 427, 448, 460, 613, 676, 919, 1199, 1559
AjnI CCWGG 4 cut(s) 10, 711, 1046, 1636
AluBI AGCT 7 cut(s) 401, 421, 620, 839, 914, 1684, 1700
AluI AGCT 7 cut(s) 401, 421, 620, 839, 914, 1684, 1700
Alw21I GWGCWC 1 cut(s) 1443
Alw26I GTCTC 9 cut(s) 49, 138, 144, 150, 156, 270, 279, 800, 1336
AlwI GGATC 5 cut(s) 35, 88, 377, 834, 1058
AlwNI CAGNNNCTG 1 cut(s) 1109
AoxI GGCC 8 cut(s) 63, 270, 321, 375, 714, 1033, 1499, 1667
ApoI RAATTY 4 cut(s) 450, 606, 1120, 1510
ArsI GACNNNNNNTTYG 6 cut(s) 1052, 1084, 1130, 1162, 1301, 1333
Asp700I GAANNNNTTC 2 cut(s) 1277, 1511
Asp718I GGTACC 1 cut(s) 1239
AspA2I CCTAGG 1 cut(s) 1492
AspLEI GCGC 3 cut(s) 55, 1589, 1643
AspS9I GGNCC 4 cut(s) 925, 1034, 1634, 1759
AsuC2I CCSGG 1 cut(s) 174
AsuHPI GGTGA 8 cut(s) 533, 646, 1040, 1070, 1334, 1372, 1420, 1745
AsuNHI GCTAGC 1 cut(s) 1073
AvaII GGWCC 3 cut(s) 925, 1634, 1759
AvrII CCTAGG 1 cut(s) 1492
BaeGI GKGCMC 1 cut(s) 1176
BaeI ACNNNNGTAYC 2 cut(s) 1480, 1513
BalI TGGCCA 2 cut(s) 65, 323
BanI GGYRCC 4 cut(s) 1173, 1239, 1301, 1586
Bbv12I GWGCWC 1 cut(s) 1443
BccI CCATC 8 cut(s) 736, 875, 911, 1000, 1025, 1220, 1463, 1659
BceAI ACGGC 2 cut(s) 173, 1600
BciT130I CCWGG 4 cut(s) 12, 713, 1048, 1638
BciVI GTATCC 2 cut(s) 306, 1481
BcnI CCSGG 1 cut(s) 174
BcoDI GTCTC 9 cut(s) 49, 138, 144, 150, 156, 270, 279, 800, 1336
BfaI CTAG 4 cut(s) 633, 1074, 1493, 1671
BfmI CTRYAG 3 cut(s) 1110, 1267, 1708
BfoI RGCGCY 3 cut(s) 56, 1590, 1644
BfrI CTTAAG 1 cut(s) 854
BfuAI ACCTGC 2 cut(s) 989, 1394
BfuI GTATCC 2 cut(s) 306, 1481
BglII AGATCT 1 cut(s) 478
BisI GCNGC 1 cut(s) 725
BlnI CCTAGG 1 cut(s) 1492
BlsI GCNGC 1 cut(s) 726
Bme1390I CCNGG 5 cut(s) 12, 174, 713, 1048, 1638
Bme18I GGWCC 3 cut(s) 925, 1634, 1759
BmgT120I GGNCC 4 cut(s) 925, 1034, 1634, 1759
BmrFI CCNGG 5 cut(s) 12, 174, 713, 1048, 1638
BmsI GCATC 3 cut(s) 1398, 1443, 1683
BmtI GCTAGC 1 cut(s) 1077
BpmI CTGGAG 1 cut(s) 33
BpuEI CTTGAG 1 cut(s) 861
BpuMI CCSGG 1 cut(s) 174
BsaAI YACGTR 1 cut(s) 961
BsaBI GATNNNNATC 1 cut(s) 32
BsaHI GRCGYC 4 cut(s) 6, 703, 1587, 1604
BsaI GGTCTC 3 cut(s) 49, 279, 800
BsaJI CCNNGG 8 cut(s) 10, 66, 648, 1134, 1402, 1492, 1502, 1577
BsaWI WCCGGW 1 cut(s) 1055
BsaXI ACNNNNNCTCC 4 cut(s) 693, 723, 959, 989
Bsc4I CCNNNNNNNGG 3 cut(s) 712, 1183, 1583
Bse118I RCCGGY 2 cut(s) 705, 1430
Bse1I ACTGG 3 cut(s) 339, 927, 1303
Bse3DI GCAATG 1 cut(s) 643
Bse8I GATNNNNATC 1 cut(s) 32
BseBI CCWGG 4 cut(s) 12, 713, 1048, 1638
BseDI CCNNGG 8 cut(s) 10, 66, 648, 1134, 1402, 1492, 1502, 1577
BseGI GGATG 3 cut(s) 343, 728, 1670
BseJI GATNNNNATC 1 cut(s) 32
BseLI CCNNNNNNNGG 3 cut(s) 712, 1183, 1583
BseMI GCAATG 1 cut(s) 643
BseMII CTCAG 2 cut(s) 515, 581
BseNI ACTGG 3 cut(s) 339, 927, 1303
BseRI GAGGAG 5 cut(s) 138, 141, 144, 147, 150
BseSI GKGCMC 1 cut(s) 1176
BseYI CCCAGC 1 cut(s) 1751
BsgI GTGCAG 1 cut(s) 1435
Bsh1236I CGCG 3 cut(s) 120, 503, 1284
BshFI GGCC 8 cut(s) 65, 272, 323, 377, 716, 1035, 1501, 1669
BshNI GGYRCC 4 cut(s) 1173, 1239, 1301, 1586
BsiHKAI GWGCWC 1 cut(s) 1443
BsiSI CCGG 7 cut(s) 174, 273, 706, 1056, 1161, 1431, 1662
BslFI GGGAC 4 cut(s) 911, 1595, 1647, 1745
BslI CCNNNNNNNGG 3 cut(s) 712, 1183, 1583
BsmAI GTCTC 9 cut(s) 49, 138, 144, 150, 156, 270, 279, 800, 1336
BsmBI CGTCTC 3 cut(s) 138, 144, 150
BsmFI GGGAC 4 cut(s) 911, 1595, 1647, 1745
BsmI GAATGC 1 cut(s) 433
BsnI GGCC 8 cut(s) 65, 272, 323, 377, 716, 1035, 1501, 1669
Bso31I GGTCTC 3 cut(s) 49, 279, 800
Bsp1286I GDGCHC 2 cut(s) 1176, 1443
Bsp1407I TGTACA 2 cut(s) 975, 1092
Bsp143I GATC 8 cut(s) 27, 93, 370, 382, 478, 814, 826, 1050
Bsp19I CCATGG 3 cut(s) 66, 648, 1502
BspANI GGCC 8 cut(s) 65, 272, 323, 377, 716, 1035, 1501, 1669
BspCNI CTCAG 2 cut(s) 516, 580
BspFNI CGCG 3 cut(s) 120, 503, 1284
BspHI TCATGA 1 cut(s) 622
BspMI ACCTGC 2 cut(s) 989, 1394
BspOI GCTAGC 1 cut(s) 1077
BspPI GGATC 5 cut(s) 35, 88, 377, 834, 1058
BspQI GCTCTTC 2 cut(s) 929, 1343
BspT107I GGYRCC 4 cut(s) 1173, 1239, 1301, 1586
BspTI CTTAAG 1 cut(s) 854
BspTNI GGTCTC 3 cut(s) 49, 279, 800
BsrDI GCAATG 1 cut(s) 643
BsrFI RCCGGY 2 cut(s) 705, 1430
BsrGI TGTACA 2 cut(s) 975, 1092
BsrI ACTGG 3 cut(s) 339, 927, 1303
BssAI RCCGGY 2 cut(s) 705, 1430
BssECI CCNNGG 8 cut(s) 10, 66, 648, 1134, 1402, 1492, 1502, 1577
BssMI GATC 8 cut(s) 27, 93, 370, 382, 478, 814, 826, 1050
BssNI GRCGYC 4 cut(s) 6, 703, 1587, 1604
BssT1I CCWWGG 7 cut(s) 66, 648, 1134, 1402, 1492, 1502, 1577
Bst2UI CCWGG 4 cut(s) 12, 713, 1048, 1638
Bst4CI ACNGT 6 cut(s) 43, 871, 890, 994, 1105, 1525
Bst6I CTCTTC 4 cut(s) 52, 687, 929, 1343
BstACI GRCGYC 4 cut(s) 6, 703, 1587, 1604
BstAFI CTTAAG 1 cut(s) 854
BstAPI GCANNNNNTGC 1 cut(s) 1106
BstAUI TGTACA 2 cut(s) 975, 1092
BstBAI YACGTR 1 cut(s) 961
BstC8I GCNNGC 3 cut(s) 224, 707, 1075
BstDEI CTNAG 3 cut(s) 524, 567, 1041
BstDSI CCRYGG 3 cut(s) 66, 648, 1502
BstEII GGTNACC 2 cut(s) 652, 1426
BstF5I GGATG 3 cut(s) 343, 728, 1670
BstFNI CGCG 3 cut(s) 120, 503, 1284
BstH2I RGCGCY 3 cut(s) 56, 1590, 1644
BstHHI GCGC 3 cut(s) 55, 1589, 1643
BstKTI GATC 8 cut(s) 30, 96, 373, 385, 481, 817, 829, 1053
BstMAI GTCTC 9 cut(s) 49, 138, 144, 150, 156, 270, 279, 800, 1336
BstMBI GATC 8 cut(s) 27, 93, 370, 382, 478, 814, 826, 1050
BstMWI GCNNNNNNNGC 1 cut(s) 1106
BstNI CCWGG 4 cut(s) 12, 713, 1048, 1638
BstNSI RCATGY 2 cut(s) 1576, 1651
BstPI GGTNACC 2 cut(s) 652, 1426
BstSCI CCNGG 5 cut(s) 10, 172, 711, 1046, 1636
BstSFI CTRYAG 3 cut(s) 1110, 1267, 1708
BstSLI GKGCMC 1 cut(s) 1176
BstUI CGCG 3 cut(s) 120, 503, 1284
BstX2I RGATCY 4 cut(s) 382, 478, 826, 1050
BstYI RGATCY 4 cut(s) 382, 478, 826, 1050
BsuI GTATCC 2 cut(s) 306, 1481
BsuRI GGCC 8 cut(s) 65, 272, 323, 377, 716, 1035, 1501, 1669
BtgI CCRYGG 3 cut(s) 66, 648, 1502
BtgZI GCGATG 1 cut(s) 705
BtsCI GGATG 3 cut(s) 343, 728, 1670
BtsI GCAGTG 3 cut(s) 1095, 1187, 1395
BtsIMutI CAGTG 5 cut(s) 810, 1095, 1187, 1296, 1395
BveI ACCTGC 2 cut(s) 989, 1394
Cac8I GCNNGC 3 cut(s) 224, 707, 1075
CaiI CAGNNNCTG 1 cut(s) 1109
CciI TCATGA 1 cut(s) 622
CfoI GCGC 3 cut(s) 55, 1589, 1643
Cfr10I RCCGGY 2 cut(s) 705, 1430
Cfr13I GGNCC 4 cut(s) 925, 1034, 1634, 1759
CseI GACGC 2 cut(s) 711, 1334
Csp6I GTAC 8 cut(s) 195, 439, 976, 1093, 1240, 1474, 1570, 1621
CviQI GTAC 8 cut(s) 195, 439, 976, 1093, 1240, 1474, 1570, 1621
DdeI CTNAG 3 cut(s) 524, 567, 1041
DinI GGCGCC 1 cut(s) 1588
DpnI GATC 8 cut(s) 29, 95, 372, 384, 480, 816, 828, 1052
DpnII GATC 8 cut(s) 27, 93, 370, 382, 478, 814, 826, 1050
DraI TTTAAA 1 cut(s) 691
DraIII CACNNNGTG 1 cut(s) 1193
EaeI YGGCCR 3 cut(s) 63, 321, 1499
Eam1104I CTCTTC 4 cut(s) 52, 687, 929, 1343
EarI CTCTTC 4 cut(s) 52, 687, 929, 1343
EciI GGCGGA 1 cut(s) 156
Eco130I CCWWGG 7 cut(s) 66, 648, 1134, 1402, 1492, 1502, 1577
Eco31I GGTCTC 3 cut(s) 49, 279, 800
Eco47I GGWCC 3 cut(s) 925, 1634, 1759
Eco57I CTGAAG 1 cut(s) 1584
Eco91I GGTNACC 2 cut(s) 652, 1426
EcoO109I RGGNCCY 2 cut(s) 1634, 1759
EcoO65I GGTNACC 2 cut(s) 652, 1426
EcoRII CCWGG 4 cut(s) 10, 711, 1046, 1636
EcoT14I CCWWGG 7 cut(s) 66, 648, 1134, 1402, 1492, 1502, 1577
EgeI GGCGCC 1 cut(s) 1588
EheI GGCGCC 1 cut(s) 1588
ErhI CCWWGG 7 cut(s) 66, 648, 1134, 1402, 1492, 1502, 1577
Esp3I CGTCTC 3 cut(s) 138, 144, 150
FaqI GGGAC 4 cut(s) 911, 1595, 1647, 1745
FauI CCCGC 1 cut(s) 1748
Fnu4HI GCNGC 1 cut(s) 725
FokI GGATG 3 cut(s) 350, 715, 1677
Fsp4HI GCNGC 1 cut(s) 725
FspBI CTAG 4 cut(s) 633, 1074, 1493, 1671
GlaI GCGC 3 cut(s) 54, 1588, 1642
GluI GCNGC 1 cut(s) 725
GsaI CCCAGC 1 cut(s) 1755
GsuI CTGGAG 1 cut(s) 33
HaeII RGCGCY 3 cut(s) 56, 1590, 1644
HaeIII GGCC 8 cut(s) 65, 272, 323, 377, 716, 1035, 1501, 1669
HapII CCGG 7 cut(s) 174, 273, 706, 1056, 1161, 1431, 1662
HgaI GACGC 2 cut(s) 711, 1334
HhaI GCGC 3 cut(s) 55, 1589, 1643
Hin1I GRCGYC 4 cut(s) 6, 703, 1587, 1604
Hin6I GCGC 3 cut(s) 53, 1587, 1641
HinP1I GCGC 3 cut(s) 53, 1587, 1641
HindIII AAGCTT 2 cut(s) 912, 1682
HinfI GANTC 3 cut(s) 164, 563, 1555
HpaII CCGG 7 cut(s) 174, 273, 706, 1056, 1161, 1431, 1662
HphI GGTGA 8 cut(s) 533, 646, 1040, 1070, 1334, 1372, 1420, 1745
Hpy166II GTNNAC 2 cut(s) 976, 1095
Hpy188I TCNGA 5 cut(s) 570, 834, 1204, 1383, 1460
Hpy188III TCNNGA 4 cut(s) 482, 623, 878, 1342
Hpy8I GTNNAC 2 cut(s) 976, 1095
Hpy99I CGWCG 2 cut(s) 705, 1529
HpyAV CCTTC 4 cut(s) 595, 810, 958, 1559
HpyCH4III ACNGT 6 cut(s) 43, 871, 890, 994, 1105, 1525
HpyCH4IV ACGT 4 cut(s) 864, 960, 1257, 1604
HpyF10VI GCNNNNNNNGC 1 cut(s) 1106
HpyF3I CTNAG 3 cut(s) 524, 567, 1041
HpySE526I ACGT 4 cut(s) 864, 960, 1257, 1604
Hsp92I GRCGYC 4 cut(s) 6, 703, 1587, 1604
HspAI GCGC 3 cut(s) 53, 1587, 1641
KasI GGCGCC 1 cut(s) 1586
KflI GGGWCCC 1 cut(s) 1759
KpnI GGTACC 1 cut(s) 1243
KroI GCCGGC 1 cut(s) 705
KroNI GCCGGC 1 cut(s) 707
Kzo9I GATC 8 cut(s) 27, 93, 370, 382, 478, 814, 826, 1050
LguI GCTCTTC 2 cut(s) 929, 1343
LmnI GCTCC 4 cut(s) 112, 714, 1163, 1446
LweI GCATC 3 cut(s) 1398, 1443, 1683
MaeI CTAG 4 cut(s) 633, 1074, 1493, 1671
MaeII ACGT 4 cut(s) 864, 960, 1257, 1604
MaeIII GTNAC 9 cut(s) 539, 652, 865, 988, 1058, 1322, 1393, 1426, 1536
MalI GATC 8 cut(s) 29, 95, 372, 384, 480, 816, 828, 1052
MboI GATC 8 cut(s) 27, 93, 370, 382, 478, 814, 826, 1050
MfeI CAATTG 1 cut(s) 207
MflI RGATCY 4 cut(s) 382, 478, 826, 1050
MhlI GDGCHC 2 cut(s) 1176, 1443
MlsI TGGCCA 2 cut(s) 65, 323
MluCI AATT 6 cut(s) 207, 450, 606, 1120, 1273, 1510
MluNI TGGCCA 2 cut(s) 65, 323
Mly113I GGCGCC 1 cut(s) 1587
MlyI GAGTC 1 cut(s) 158
MmeI TCCRAC 2 cut(s) 804, 1096
Mox20I TGGCCA 2 cut(s) 65, 323
MroNI GCCGGC 1 cut(s) 705
MroXI GAANNNNTTC 2 cut(s) 1277, 1511
MscI TGGCCA 2 cut(s) 65, 323
MseI TTAA 4 cut(s) 327, 690, 855, 1746
Msp20I TGGCCA 2 cut(s) 65, 323
MspA1I CMGCKG 3 cut(s) 421, 1713, 1755
MspCI CTTAAG 1 cut(s) 854
MspI CCGG 7 cut(s) 174, 273, 706, 1056, 1161, 1431, 1662
MspR9I CCNGG 5 cut(s) 12, 174, 713, 1048, 1638
MunI CAATTG 1 cut(s) 207
Mva1269I GAATGC 1 cut(s) 433
MvaI CCWGG 4 cut(s) 12, 713, 1048, 1638
MvnI CGCG 3 cut(s) 120, 503, 1284
MwoI GCNNNNNNNGC 1 cut(s) 1106
NaeI GCCGGC 1 cut(s) 707
NarI GGCGCC 1 cut(s) 1587
NciI CCSGG 1 cut(s) 174
NcoI CCATGG 3 cut(s) 66, 648, 1502
NdeII GATC 8 cut(s) 27, 93, 370, 382, 478, 814, 826, 1050
NgoMIV GCCGGC 1 cut(s) 705
NheI GCTAGC 1 cut(s) 1073
NmuCI GTSAC 9 cut(s) 539, 652, 865, 988, 1058, 1322, 1393, 1426, 1536
NspI RCATGY 2 cut(s) 1576, 1651
PagI TCATGA 1 cut(s) 622
PciI ACATGT 1 cut(s) 1647
PciSI GCTCTTC 2 cut(s) 929, 1343
PcsI WCGNNNNNNNCGW 2 cut(s) 1521, 1620
PctI GAATGC 1 cut(s) 433
PdiI GCCGGC 1 cut(s) 707
PdmI GAANNNNTTC 2 cut(s) 1277, 1511
PfeI GAWTC 2 cut(s) 563, 1555
PflFI GACNNNGTC 1 cut(s) 1328
PflMI CCANNNNNTGG 1 cut(s) 1183
PfoI TCCNGGA 1 cut(s) 1046
PkrI GCNGC 1 cut(s) 726
PleI GAGTC 1 cut(s) 158
PluTI GGCGCC 1 cut(s) 1590
PpsI GAGTC 1 cut(s) 158
Ppu21I YACGTR 1 cut(s) 961
PpuMI RGGWCCY 2 cut(s) 1634, 1759
PscI ACATGT 1 cut(s) 1647
Psp5II RGGWCCY 2 cut(s) 1634, 1759
Psp6I CCWGG 4 cut(s) 10, 711, 1046, 1636
PspEI GGTNACC 2 cut(s) 652, 1426
PspFI CCCAGC 1 cut(s) 1751
PspGI CCWGG 4 cut(s) 10, 711, 1046, 1636
PspPI GGNCC 4 cut(s) 925, 1034, 1634, 1759
PspPPI RGGWCCY 2 cut(s) 1634, 1759
PsrI GAACNNNNNNTAC 2 cut(s) 1472, 1504
PstNI CAGNNNCTG 1 cut(s) 1109
PsuI RGATCY 4 cut(s) 382, 478, 826, 1050
PsyI GACNNNGTC 1 cut(s) 1328
PvuII CAGCTG 1 cut(s) 421
RsaI GTAC 8 cut(s) 196, 440, 977, 1094, 1241, 1475, 1571, 1622
RsaNI GTAC 8 cut(s) 195, 439, 976, 1093, 1240, 1474, 1570, 1621
SapI GCTCTTC 2 cut(s) 929, 1343
SaqAI TTAA 4 cut(s) 327, 690, 855, 1746
SatI GCNGC 1 cut(s) 725
Sau3AI GATC 8 cut(s) 27, 93, 370, 382, 478, 814, 826, 1050
Sau96I GGNCC 4 cut(s) 925, 1034, 1634, 1759
SchI GAGTC 1 cut(s) 158
ScrFI CCNGG 5 cut(s) 12, 174, 713, 1048, 1638
SduI GDGCHC 2 cut(s) 1176, 1443
SfaNI GCATC 3 cut(s) 1398, 1443, 1683
SfcI CTRYAG 3 cut(s) 1110, 1267, 1708
SfoI GGCGCC 1 cut(s) 1588
SinI GGWCC 3 cut(s) 925, 1634, 1759
SmlI CTYRAG 2 cut(s) 854, 876
SmoI CTYRAG 2 cut(s) 854, 876
Sse9I AATT 6 cut(s) 207, 450, 606, 1120, 1273, 1510
SspDI GGCGCC 1 cut(s) 1586
SspMI CTAG 4 cut(s) 633, 1074, 1493, 1671
StyD4I CCNGG 5 cut(s) 10, 172, 711, 1046, 1636
StyI CCWWGG 7 cut(s) 66, 648, 1134, 1402, 1492, 1502, 1577
TaaI ACNGT 6 cut(s) 43, 871, 890, 994, 1105, 1525
TaiI ACGT 4 cut(s) 867, 963, 1260, 1607
TaqI TCGA 2 cut(s) 483, 695
TasI AATT 6 cut(s) 207, 450, 606, 1120, 1273, 1510
TatI WGTACW 2 cut(s) 975, 1092
TauI GCSGC 1 cut(s) 727
TfiI GAWTC 2 cut(s) 563, 1555
Tru1I TTAA 4 cut(s) 327, 690, 855, 1746
Tru9I TTAA 4 cut(s) 327, 690, 855, 1746
TscAI CASTG 5 cut(s) 817, 1102, 1194, 1303, 1402
TseFI GTSAC 9 cut(s) 539, 652, 865, 988, 1058, 1322, 1393, 1426, 1536
Tsp45I GTSAC 9 cut(s) 539, 652, 865, 988, 1058, 1322, 1393, 1426, 1536
TspDTI ATGAA 6 cut(s) 510, 576, 614, 639, 674, 1303
TspGWI ACGGA 4 cut(s) 162, 168, 174, 182
TspRI CASTG 5 cut(s) 817, 1102, 1194, 1303, 1402
Tth111I GACNNNGTC 1 cut(s) 1328
Van91I CCANNNNNTGG 1 cut(s) 1183
Vha464I CTTAAG 1 cut(s) 854
VpaK11BI GGWCC 3 cut(s) 925, 1634, 1759
XapI RAATTY 4 cut(s) 450, 606, 1120, 1510
XceI RCATGY 2 cut(s) 1576, 1651
XcmI CCANNNNNNNNNTGG 2 cut(s) 331, 868
XmaJI CCTAGG 1 cut(s) 1492
XmnI GAANNNNTTC 2 cut(s) 1277, 1511
XspI CTAG 4 cut(s) 633, 1074, 1493, 1671
ZraI GACGTC 1 cut(s) 1605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.