Rorug04G0267700

L-tryptophan--pyruvate aminotransferase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0007162
Physical Location & Seq
Reverse (-)
44021821 .. 44036943
15123 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0267700.1

Sequence Viewer

Length: 1707 bp
ATGAGCGGAGATGACCGTCACGCCAAGAAGAAGAAGTTCGCCATCCTCGGTGTGTCGGCGTTGATTCTGGTGGCCATGGTGGTTGCTGTGGCTGTTGGGGTCACCGAAAGCCAGAAAGGCGGAAAGGACGAGAAGAAACCAGCCACAACATCCAAGGCAATTGAAGCCGTCTGCCAACCAACAGACTACAAGGAAACTTGCCAAAACAGCCTCTCTGCAAAAGCCAGCAACGTCACCGACCCAAAAGAGCTCATCAAGATTGGGTTCCAGATCACCATAGACAAAATCCAAGAGGTGATCAACAACTCCCCCACCTTGAAAGAGCTCGCCAAGGATCCGAGGAGCAACCAGGCCCTTCAGAACTGCAAAGAACTCTTAGAGTTCTCCATCAATGATCTGAAGAAGTCGGTCGAGCAGATCGGCCCCTTCGAAGTTAGCAAGCTCAAAGCATATGTCGACGACCTTAAGGTTTGGCTTAGTGCCTCCATCAGCTACGAACAGACTTGCTTGGATGGGTTCGTGGACACCAAGGGTGAGGCCGGGACCAAAATGCAGGGCTTCTTAAAGCAATCACAAGAACTCACCAAGAACGGACTTGCCATGGTCACTGAAATAGGCAACCTCTTGGTAAATGGCAACCTTAAAACCCAACGTCGTCTCTTAGCTGAGGCTGAGGCTCCTATAGACCAAAAGAAGGCAAATAAGATCATCCCCTCATGGATTGATGGACGCAAGCTCGACCTCGCTACCGCCAATCCCAGCTCCCTTAAACCCGATGTTGTAGTCGCTGCGGATGGAAGTGAAAATTACAAGACCATCAACGAGGCTCTCCAGGATATGCCCAAGAACGGTGGTGAAAAAACGTTTGTGATCTACATCAAAGAGGGAACGTATGATGAGAATGTGTTGGTTGACAAGCATATGACCAATGTCATGTTTATCGGTGATGGCCCTACCAAGACCAAGATCACGGGTAACAAGAACTATGCCGATGGTGTCCAAACATACAAAACCGCAACTGTCGCTGTGATCGGAGACTACTTCATTGCTAAGGACATAGGATTCGAGAACACAGCCGGACCTAAAGGACACCAAGCCGTGGCACTGCGTGTTCAATCTGATCTGTCCATCTTCTACAACTGCCAGATAGACGGTTACCAAAACACTCTCTTCACCCAAACACACAGGCAATTCTACCGAGACTGCACCATCTCGGGAACCATCGACTTCATCTTCGGTGATGCAGTCGCCGTGTTCCAAAACTGCAAGTTGATCATCAGGAAGCCCGACTCAGATCAGAGCTGCTTTGTCACCTCCCAAGGAAGGAGTGACAAGCGGCAGCCTACTGCCATCGCCCTCCAAAATTGCACCATTAGCGGCGAGAAGGACTATGTGAACAACAAAGGTGCCTACTTGGGCAGGCCACAACACGCCTACTCTAGGACCATCGTGATGCAGTCCGAGATCGATGACGTTATCAGCTCTGAGGGTTGGATGGAGTGGACTGGTAAGACCAACCACGAAACATGCTGGTTCGGCGAGTTCTCAAACAGGGGACGTGGTGCGGCCACCAACAAGAGGGTGAATTGGTACAAGTTGGTCACCCGTGAACAAGCCGCCGAATTCACCCCCGGCGGAATTCTTTCTGGTGATAGGTGGATCAAGCCCAGCGGTGTGCCGTATGAGGCTGGAATGATGCGTGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004021 GO:0004838 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006725 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0008483 GO:0008793 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009607 GO:0009617 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009641 GO:0009653 GO:0009683 GO:0009684 GO:0009719 GO:0009723 GO:0009725 GO:0009791 GO:0009850 GO:0009851 GO:0009888 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010074 GO:0010078 GO:0010087 GO:0010326 GO:0010817 GO:0016053 GO:0016740 GO:0016769 GO:0018130 GO:0019438 GO:0019752 GO:0019827 GO:0019842 GO:0022414 GO:0022622 GO:0030170 GO:0032501 GO:0032502 GO:0032787 GO:0034641 GO:0034754 GO:0036094 GO:0042221 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0043436 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046394 GO:0046483 GO:0047312 GO:0047635 GO:0048037 GO:0048364 GO:0048366 GO:0048367 GO:0048438 GO:0048467 GO:0048507 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050048 GO:0050362 GO:0050662 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0070279 GO:0070529 GO:0070546 GO:0070547 GO:0070548 GO:0071704 GO:0072330 GO:0080097 GO:0080098 GO:0080099 GO:0080100 GO:0080130 GO:0090567 GO:0097159 GO:0098542 GO:0098727 GO:0099402 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1905392
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
Alliinase_C

Protein Analysis

568

Amino Acids

62.65

Weight (kDa)

8.13

Isoelectric Point (pI)

29.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 53 - 201 1.8e-31 Plant invertase/pectin methylesterase inhibitor
Pectinesterase PF01095 259 - 551 1.2e-122 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1406
AccB7I CCANNNNNTGG 1 cut(s) 1099
AccBSI CCGCTC 1 cut(s) 6
AccI GTMKAC 1 cut(s) 456
AclI AACGTT 1 cut(s) 863
AclWI GGATC 3 cut(s) 329, 342, 1667
AcoI YGGCCR 2 cut(s) 72, 1566
AcsI RAATTY 2 cut(s) 1622, 1638
AcuI CTGAAG 2 cut(s) 341, 419
AdeI CACNNNGTG 1 cut(s) 1109
AfaI GTAC 1 cut(s) 1592
AfiI CCNNNNNNNGG 6 cut(s) 694, 848, 1099, 1323, 1440, 1578
AflII CTTAAG 1 cut(s) 464
AgsI TTSAA 3 cut(s) 164, 319, 1115
AjiI CACGTC 1 cut(s) 1559
AjnI CCWGG 2 cut(s) 348, 831
AluBI AGCT 9 cut(s) 250, 325, 442, 492, 665, 736, 762, 1302, 1482
AluI AGCT 9 cut(s) 250, 325, 442, 492, 665, 736, 762, 1302, 1482
Alw21I GWGCWC 2 cut(s) 252, 327
Alw26I GTCTC 3 cut(s) 662, 1029, 1194
AlwI GGATC 3 cut(s) 329, 342, 1667
Ama87I CYCGRG 1 cut(s) 1213
AoxI GGCC 7 cut(s) 72, 351, 421, 537, 949, 1421, 1566
ApeKI GCWGC 3 cut(s) 788, 1302, 1339
ApoI RAATTY 2 cut(s) 1622, 1638
ArsI GACNNNNNNTTYG 6 cut(s) 438, 470, 1046, 1078, 1217, 1249
Asp700I GAANNNNTTC 2 cut(s) 35, 1642
AspS9I GGNCC 6 cut(s) 352, 422, 543, 950, 1079, 1443
AsuC2I CCSGG 2 cut(s) 541, 1632
AsuII TTCGAA 1 cut(s) 429
AvaI CYCGRG 1 cut(s) 1213
AvaII GGWCC 3 cut(s) 543, 1079, 1443
BalI TGGCCA 1 cut(s) 74
BamHI GGATCC 1 cut(s) 334
BanI GGYRCC 1 cut(s) 1406
BanII GRGCYC 2 cut(s) 252, 327
Bbv12I GWGCWC 2 cut(s) 252, 327
BbvCI CCTCAGC 2 cut(s) 666, 672
BbvI GCAGC 3 cut(s) 775, 1289, 1351
BceAI ACGGC 4 cut(s) 152, 1082, 1235, 1663
BciT130I CCWGG 2 cut(s) 350, 833
BclI TGATCA 2 cut(s) 297, 1272
BcnI CCSGG 2 cut(s) 541, 1632
BcoDI GTCTC 3 cut(s) 662, 1029, 1194
BfaI CTAG 1 cut(s) 1440
BfmI CTRYAG 1 cut(s) 681
BfrI CTTAAG 1 cut(s) 464
BglI GCCNNNNNGGC 1 cut(s) 117
BisI GCNGC 7 cut(s) 789, 1303, 1337, 1340, 1378, 1566, 1617
BlsI GCNGC 7 cut(s) 790, 1304, 1338, 1341, 1379, 1567, 1618
Bme1390I CCNGG 4 cut(s) 350, 541, 833, 1632
Bme18I GGWCC 3 cut(s) 543, 1079, 1443
BmeT110I CYCGRG 1 cut(s) 1213
BmgBI CACGTC 1 cut(s) 1559
BmgT120I GGNCC 6 cut(s) 352, 422, 543, 950, 1079, 1443
BmiI GGNNCC 7 cut(s) 266, 336, 424, 544, 678, 1219, 1408
BmrFI CCNGG 4 cut(s) 350, 541, 833, 1632
BmsI GCATC 3 cut(s) 1231, 1443, 1686
BoxI GACNNNNGTC 1 cut(s) 929
BpmI CTGGAG 1 cut(s) 815
Bpu10I CCTNAGC 3 cut(s) 666, 672, 1050
Bpu14I TTCGAA 1 cut(s) 429
BpuMI CCSGG 2 cut(s) 541, 1632
Bsa29I ATCGAT 1 cut(s) 1467
BsaBI GATNNNNATC 1 cut(s) 875
Bsc4I CCNNNNNNNGG 6 cut(s) 694, 848, 1099, 1323, 1440, 1578
Bse1I ACTGG 1 cut(s) 1510
Bse3DI GCAATG 1 cut(s) 1044
Bse8I GATNNNNATC 1 cut(s) 875
BseBI CCWGG 2 cut(s) 350, 833
BseCI ATCGAT 1 cut(s) 1467
BseGI GGATG 6 cut(s) 42, 149, 517, 708, 799, 1500
BseJI GATNNNNATC 1 cut(s) 875
BseLI CCNNNNNNNGG 6 cut(s) 694, 848, 1099, 1323, 1440, 1578
BseMI GCAATG 1 cut(s) 1044
BseMII CTCAG 4 cut(s) 657, 663, 1305, 1476
BseNI ACTGG 1 cut(s) 1510
BseRI GAGGAG 1 cut(s) 355
BseXI GCAGC 3 cut(s) 775, 1289, 1351
BseYI CCCAGC 2 cut(s) 758, 1667
BsgI GTGCAG 1 cut(s) 1189
Bsh1285I CGRYCG 1 cut(s) 411
BshFI GGCC 7 cut(s) 74, 353, 423, 539, 951, 1423, 1568
BshNI GGYRCC 1 cut(s) 1406
BshVI ATCGAT 1 cut(s) 1467
BsiEI CGRYCG 1 cut(s) 411
BsiHKAI GWGCWC 2 cut(s) 252, 327
BsiHKCI CYCGRG 1 cut(s) 1213
BsiSI CCGG 3 cut(s) 540, 1077, 1632
BslFI GGGAC 2 cut(s) 556, 1569
BslI CCNNNNNNNGG 6 cut(s) 694, 848, 1099, 1323, 1440, 1578
BsmAI GTCTC 3 cut(s) 662, 1029, 1194
BsmBI CGTCTC 1 cut(s) 662
BsmFI GGGAC 2 cut(s) 556, 1569
BsnI GGCC 7 cut(s) 74, 353, 423, 539, 951, 1423, 1568
BsoBI CYCGRG 1 cut(s) 1213
Bsp119I TTCGAA 1 cut(s) 429
Bsp1286I GDGCHC 2 cut(s) 252, 327
Bsp19I CCATGG 2 cut(s) 75, 600
BspANI GGCC 7 cut(s) 74, 353, 423, 539, 951, 1423, 1568
BspCNI CTCAG 4 cut(s) 658, 664, 1304, 1477
BspDI ATCGAT 1 cut(s) 1467
BspLI GGNNCC 7 cut(s) 266, 336, 424, 544, 678, 1219, 1408
BspPI GGATC 3 cut(s) 329, 342, 1667
BspT104I TTCGAA 1 cut(s) 429
BspT107I GGYRCC 1 cut(s) 1406
BspTI CTTAAG 1 cut(s) 464
BsrBI CCGCTC 1 cut(s) 6
BsrDI GCAATG 1 cut(s) 1044
BsrI ACTGG 1 cut(s) 1510
BssT1I CCWWGG 6 cut(s) 75, 153, 330, 528, 600, 1318
Bst2UI CCWGG 2 cut(s) 350, 833
Bst4CI ACNGT 4 cut(s) 17, 851, 1021, 1154
Bst6I CTCTTC 1 cut(s) 1175
BstAFI CTTAAG 1 cut(s) 464
BstBI TTCGAA 1 cut(s) 429
BstC8I GCNNGC 5 cut(s) 226, 327, 440, 734, 1421
BstDEI CTNAG 8 cut(s) 376, 476, 661, 666, 672, 1050, 1291, 1485
BstDSI CCRYGG 3 cut(s) 75, 600, 1098
BstEII GGTNACC 3 cut(s) 100, 1154, 1600
BstENI CCTNNNNNAGG 1 cut(s) 1438
BstF5I GGATG 6 cut(s) 42, 149, 517, 708, 799, 1500
BstMAI GTCTC 3 cut(s) 662, 1029, 1194
BstMCI CGRYCG 1 cut(s) 411
BstMWI GCNNNNNNNGC 6 cut(s) 117, 164, 207, 1022, 1374, 1536
BstNI CCWGG 2 cut(s) 350, 833
BstNSI RCATGY 1 cut(s) 1530
BstPAI GACNNNNGTC 1 cut(s) 929
BstPI GGTNACC 3 cut(s) 100, 1154, 1600
BstSCI CCNGG 4 cut(s) 348, 539, 831, 1630
BstSFI CTRYAG 1 cut(s) 681
BstV1I GCAGC 3 cut(s) 775, 1289, 1351
BstX2I RGATCY 1 cut(s) 334
BstYI RGATCY 1 cut(s) 334
Bsu15I ATCGAT 1 cut(s) 1467
BsuRI GGCC 7 cut(s) 74, 353, 423, 539, 951, 1423, 1568
BsuTUI ATCGAT 1 cut(s) 1467
BtgI CCRYGG 3 cut(s) 75, 600, 1098
BtgZI GCGATG 1 cut(s) 1336
BtrI CACGTC 1 cut(s) 1559
BtsCI GGATG 6 cut(s) 42, 149, 517, 708, 799, 1500
BtsI GCAGTG 1 cut(s) 1103
BtsIMutI CAGTG 2 cut(s) 606, 1103
Cac8I GCNNGC 5 cut(s) 226, 327, 440, 734, 1421
Cfr13I GGNCC 6 cut(s) 352, 422, 543, 950, 1079, 1443
ClaI ATCGAT 1 cut(s) 1467
CseI GACGC 1 cut(s) 738
Csp6I GTAC 1 cut(s) 1591
CspCI CAANNNNNGTGG 2 cut(s) 832, 867
CviAII CATG 5 cut(s) 76, 601, 717, 934, 1527
CviQI GTAC 1 cut(s) 1591
DdeI CTNAG 8 cut(s) 376, 476, 661, 666, 672, 1050, 1291, 1485
DraIII CACNNNGTG 1 cut(s) 1109
EaeI YGGCCR 2 cut(s) 72, 1566
Eam1104I CTCTTC 1 cut(s) 1175
EarI CTCTTC 1 cut(s) 1175
EciI GGCGGA 2 cut(s) 135, 1650
Ecl136II GAGCTC 2 cut(s) 250, 325
Eco130I CCWWGG 6 cut(s) 75, 153, 330, 528, 600, 1318
Eco24I GRGCYC 2 cut(s) 252, 327
Eco47I GGWCC 3 cut(s) 543, 1079, 1443
Eco53kI GAGCTC 2 cut(s) 250, 325
Eco57I CTGAAG 2 cut(s) 341, 419
Eco88I CYCGRG 1 cut(s) 1213
Eco91I GGTNACC 3 cut(s) 100, 1154, 1600
EcoICRI GAGCTC 2 cut(s) 250, 325
EcoNI CCTNNNNNAGG 1 cut(s) 1438
EcoO109I RGGNCCY 1 cut(s) 352
EcoO65I GGTNACC 3 cut(s) 100, 1154, 1600
EcoRI GAATTC 2 cut(s) 1622, 1638
EcoRII CCWGG 2 cut(s) 348, 831
EcoT14I CCWWGG 6 cut(s) 75, 153, 330, 528, 600, 1318
EcoT38I GRGCYC 2 cut(s) 252, 327
ErhI CCWWGG 6 cut(s) 75, 153, 330, 528, 600, 1318
Esp3I CGTCTC 1 cut(s) 662
FaeI CATG 5 cut(s) 79, 604, 720, 937, 1530
FaqI GGGAC 2 cut(s) 556, 1569
FatI CATG 5 cut(s) 75, 600, 716, 933, 1526
FauNDI CATATG 2 cut(s) 451, 921
FbaI TGATCA 2 cut(s) 297, 1272
FblI GTMKAC 1 cut(s) 456
Fnu4HI GCNGC 7 cut(s) 789, 1303, 1337, 1340, 1378, 1566, 1617
FokI GGATG 6 cut(s) 29, 136, 524, 695, 806, 1507
FriOI GRGCYC 2 cut(s) 252, 327
Fsp4HI GCNGC 7 cut(s) 789, 1303, 1337, 1340, 1378, 1566, 1617
FspBI CTAG 1 cut(s) 1440
GluI GCNGC 7 cut(s) 789, 1303, 1337, 1340, 1378, 1566, 1617
GsaI CCCAGC 2 cut(s) 762, 1671
GsuI CTGGAG 1 cut(s) 815
HaeIII GGCC 7 cut(s) 74, 353, 423, 539, 951, 1423, 1568
HapII CCGG 3 cut(s) 540, 1077, 1632
HgaI GACGC 1 cut(s) 738
Hin1II CATG 5 cut(s) 79, 604, 720, 937, 1530
HincII GTYRAC 2 cut(s) 457, 913
HindII GTYRAC 2 cut(s) 457, 913
HinfI GANTC 3 cut(s) 64, 1062, 1289
HpaII CCGG 3 cut(s) 540, 1077, 1632
Hpy166II GTNNAC 6 cut(s) 457, 523, 913, 1396, 1503, 1610
Hpy188I TCNGA 9 cut(s) 339, 360, 399, 1034, 1120, 1294, 1299, 1462, 1486
Hpy188III TCNNGA 6 cut(s) 256, 268, 1066, 1215, 1279, 1450
Hpy8I GTNNAC 6 cut(s) 457, 523, 913, 1396, 1503, 1610
Hpy99I CGWCG 2 cut(s) 461, 657
HpyAV CCTTC 5 cut(s) 365, 436, 688, 1317, 1378
HpyCH4III ACNGT 4 cut(s) 17, 851, 1021, 1154
HpyCH4IV ACGT 6 cut(s) 231, 652, 863, 890, 1473, 1558
HpyCH4V TGCA 8 cut(s) 218, 366, 553, 1206, 1244, 1266, 1368, 1456
HpyF10VI GCNNNNNNNGC 6 cut(s) 117, 164, 207, 1022, 1374, 1536
HpyF3I CTNAG 8 cut(s) 376, 476, 661, 666, 672, 1050, 1291, 1485
HpySE526I ACGT 6 cut(s) 231, 652, 863, 890, 1473, 1558
Hsp92II CATG 5 cut(s) 79, 604, 720, 937, 1530
Ksp22I TGATCA 2 cut(s) 297, 1272
LmnI GCTCC 3 cut(s) 342, 682, 767
Lsp1109I GCAGC 3 cut(s) 775, 1289, 1351
LweI GCATC 3 cut(s) 1231, 1443, 1686
MaeI CTAG 1 cut(s) 1440
MaeII ACGT 6 cut(s) 231, 652, 863, 890, 1473, 1558
MaeIII GTNAC 9 cut(s) 17, 100, 232, 604, 974, 1154, 1309, 1328, 1600
MbiI CCGCTC 1 cut(s) 6
MboII GAAGA 7 cut(s) 40, 43, 145, 412, 1123, 1162, 1225
MfeI CAATTG 1 cut(s) 159
MflI RGATCY 1 cut(s) 334
MhlI GDGCHC 2 cut(s) 252, 327
MlsI TGGCCA 1 cut(s) 74
MluCI AATT 7 cut(s) 159, 805, 1190, 1363, 1585, 1622, 1638
MluNI TGGCCA 1 cut(s) 74
MlyI GAGTC 1 cut(s) 1283
MmeI TCCRAC 1 cut(s) 1472
Mox20I TGGCCA 1 cut(s) 74
MroXI GAANNNNTTC 2 cut(s) 35, 1642
MscI TGGCCA 1 cut(s) 74
MseI TTAA 4 cut(s) 465, 563, 642, 768
MslI CAYNNNNRTG 1 cut(s) 1451
Msp20I TGGCCA 1 cut(s) 74
MspA1I CMGCKG 1 cut(s) 1671
MspCI CTTAAG 1 cut(s) 464
MspI CCGG 3 cut(s) 540, 1077, 1632
MspR9I CCNGG 4 cut(s) 350, 541, 833, 1632
MunI CAATTG 1 cut(s) 159
MvaI CCWGG 2 cut(s) 350, 833
MwoI GCNNNNNNNGC 6 cut(s) 117, 164, 207, 1022, 1374, 1536
NciI CCSGG 2 cut(s) 541, 1632
NcoI CCATGG 2 cut(s) 75, 600
NdeI CATATG 2 cut(s) 451, 921
NlaIII CATG 5 cut(s) 79, 604, 720, 937, 1530
NlaIV GGNNCC 7 cut(s) 266, 336, 424, 544, 678, 1219, 1408
NmuCI GTSAC 7 cut(s) 17, 100, 232, 604, 1309, 1328, 1600
NspI RCATGY 1 cut(s) 1530
NspV TTCGAA 1 cut(s) 429
PcsI WCGNNNNNNNCGW 1 cut(s) 426
PdmI GAANNNNTTC 2 cut(s) 35, 1642
PfeI GAWTC 2 cut(s) 64, 1062
PflMI CCANNNNNTGG 1 cut(s) 1099
PfoI TCCNGGA 1 cut(s) 831
PkrI GCNGC 7 cut(s) 790, 1304, 1338, 1341, 1379, 1567, 1618
PleI GAGTC 1 cut(s) 1283
PpsI GAGTC 1 cut(s) 1283
PshAI GACNNNNGTC 1 cut(s) 929
Psp124BI GAGCTC 2 cut(s) 252, 327
Psp1406I AACGTT 1 cut(s) 863
Psp6I CCWGG 2 cut(s) 348, 831
PspEI GGTNACC 3 cut(s) 100, 1154, 1600
PspFI CCCAGC 2 cut(s) 758, 1667
PspGI CCWGG 2 cut(s) 348, 831
PspN4I GGNNCC 7 cut(s) 266, 336, 424, 544, 678, 1219, 1408
PspPI GGNCC 6 cut(s) 352, 422, 543, 950, 1079, 1443
PsuI RGATCY 1 cut(s) 334
RsaI GTAC 1 cut(s) 1592
RsaNI GTAC 1 cut(s) 1591
RseI CAYNNNNRTG 1 cut(s) 1451
SacI GAGCTC 2 cut(s) 252, 327
SalI GTCGAC 1 cut(s) 455
SaqAI TTAA 4 cut(s) 465, 563, 642, 768
SatI GCNGC 7 cut(s) 789, 1303, 1337, 1340, 1378, 1566, 1617
Sau96I GGNCC 6 cut(s) 352, 422, 543, 950, 1079, 1443
SchI GAGTC 1 cut(s) 1283
ScrFI CCNGG 4 cut(s) 350, 541, 833, 1632
SduI GDGCHC 2 cut(s) 252, 327
SfaNI GCATC 3 cut(s) 1231, 1443, 1686
SfcI CTRYAG 1 cut(s) 681
SfuI TTCGAA 1 cut(s) 429
SinI GGWCC 3 cut(s) 543, 1079, 1443
SmiMI CAYNNNNRTG 1 cut(s) 1451
SmlI CTYRAG 1 cut(s) 464
SmoI CTYRAG 1 cut(s) 464
Sse9I AATT 7 cut(s) 159, 805, 1190, 1363, 1585, 1622, 1638
SspMI CTAG 1 cut(s) 1440
SstI GAGCTC 2 cut(s) 252, 327
StyD4I CCNGG 4 cut(s) 348, 539, 831, 1630
StyI CCWWGG 6 cut(s) 75, 153, 330, 528, 600, 1318
TaaI ACNGT 4 cut(s) 17, 851, 1021, 1154
TaiI ACGT 6 cut(s) 234, 655, 866, 893, 1476, 1561
TaqI TCGA 7 cut(s) 411, 429, 456, 738, 1065, 1224, 1467
TaqII GACCGA 1 cut(s) 397
TasI AATT 7 cut(s) 159, 805, 1190, 1363, 1585, 1622, 1638
TauI GCSGC 4 cut(s) 1339, 1380, 1568, 1619
TfiI GAWTC 2 cut(s) 64, 1062
Tru1I TTAA 4 cut(s) 465, 563, 642, 768
Tru9I TTAA 4 cut(s) 465, 563, 642, 768
TscAI CASTG 2 cut(s) 613, 1110
TseFI GTSAC 7 cut(s) 17, 100, 232, 604, 1309, 1328, 1600
TseI GCWGC 3 cut(s) 788, 1302, 1339
Tsp45I GTSAC 7 cut(s) 17, 100, 232, 604, 1309, 1328, 1600
TspDTI ATGAA 2 cut(s) 1033, 1219
TspGWI ACGGA 1 cut(s) 606
TspRI CASTG 2 cut(s) 613, 1110
Van91I CCANNNNNTGG 1 cut(s) 1099
Vha464I CTTAAG 1 cut(s) 464
VpaK11BI GGWCC 3 cut(s) 543, 1079, 1443
XagI CCTNNNNNAGG 1 cut(s) 1438
XapI RAATTY 2 cut(s) 1622, 1638
XceI RCATGY 1 cut(s) 1530
XmiI GTMKAC 1 cut(s) 456
XmnI GAANNNNTTC 2 cut(s) 35, 1642
XspI CTAG 1 cut(s) 1440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.