MD13G1097200.v1.1

palmitoyl-(protein) hydrolase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0007162
Physical Location & Seq
Forward (+)
6897913 .. 6901584
3672 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1097200.v1.1.491

Sequence Viewer

Length: 1407 bp
ATGCTGACGAGTTTGGAGAAAATGATAAGACTATGGATTGCGGCGCTGCAATTTTCGGAGCTTTTTGTGAGCAGCTTGTTTCACATGCTGTACGGGTTCTATATCTTTAGCACCGCCGTGGCCGGTGATCTGTCGCAGGCGCTGAACGATTTGCTCTCGAAGCCGAACGTGAGCATTCAGGTGAAGGATGAGGTGGCACAGAGAGACCTGTCGGCCAATGGCAGCCTGCCACCTATTGTTTTGGTTCATGGGATATTTGGTTTTGGCAAAGGGAGATTGGGAAGTTTATCGTATTTCGCCGGGGCGGAGAAGAAGGATGACAGGGTTCTGGTGCCTGATTTGGGATCTCTTACGAGCATTTATGATAGGGCTCGTGAATTGTTCTACTATTTGAAGGGTGGGCGAGTCGATTATGGTGAAGAACACAGCAAGGCTTGTGGGCACTCACAATTCGGTCGAATTTACGAACAAGGGCACTACCCTGAATGGGATGAGGATCACCCTATTCACTTTGTCGGCCATTCAGCCGGAGCACAGGTTGTCCGTGTGCTGCAGCAAATGCTTGCTGATAAGGCGTTCAAGGGGTTTGAGAACACGAATGAGAATTGGGTACTGAGCTTAACATCATTGTCAGGAGCATTCAATGGGACAACAAGAACCTACTTGGATGGATTTCAGCCAGAAGATGGAAAAACTTTGAAACCAATTTGTCTGCTGCAGTTATGCCGGCTAGGAGTGATCATTTACGATTGGTTTGACATTCCCTGGCTGAAGGCTTATTACAACTTCGGATTTGATCACTTTAACCTCACATGGAAGAAAGTGGGTGTGAGGGGTCTTGTTGATTGCCTCTTGGGAAACTCAGGCCCGTTCGCTTCTGGTGATTGGATTCTCCCAGACCTAACACTTCAAGGCTCCATAAGACTTAACAGCCATCTCCATTCCTTCCCCAACACATATTACTTCAGCTATGCCACTAAGCGTACCAAGAAGGTGTTGGGTGTCACAGTTCCTTCAAGTATATTCGGAATTCATCCATTGCTTTTTATTAGAGTGTTGCAGATGAGCCAATGGCGTCACCCTCCAGATGTCTCTCCCCCATACAAAGGCTACAGGGATGAGGATTGGCAGGACAATGATGGCGCTTTGAATACCATCTCCATGACACGCCCTCTTCTTCCAATTGAACATCCAAGCCGGTTTGTAAAAGATGAATCAGATTGTCATCCCTTGCAACCGGGCATCTGGTACTACAAGATTGTGGAAGCCGATCACATATTCTTCATTGTGAATCGGGAGAGAGCCGGAGTTCAGTTTGATCTGATATACGACAGCATTTTCGAACGCTGCAGAAAGCATGTATTTAGAAAAACTCCTCAGACTTTACCGAACGAAACACACCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

469

Amino Acids

53.38

Weight (kDa)

6.68

Isoelectric Point (pI)

31.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lip_C PF24708 78 - 190 5.8e-21 Lipase-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 331
AccB7I CCANNNNNTGG 1 cut(s) 686
AciI CCGC 3 cut(s) 41, 114, 305
AclWI GGATC 2 cut(s) 352, 504
AcoI YGGCCR 3 cut(s) 120, 213, 517
AcsI RAATTY 2 cut(s) 459, 1029
AcuI CTGAAG 2 cut(s) 791, 949
AcyI GRCGYC 1 cut(s) 1075
AfaI GTAC 4 cut(s) 92, 612, 985, 1250
AfiI CCNNNNNNNGG 4 cut(s) 341, 487, 686, 1106
AgsI TTSAA 8 cut(s) 394, 580, 643, 700, 911, 1017, 1150, 1187
AjnI CCWGG 1 cut(s) 764
AleI CACNNNNGTG 1 cut(s) 116
AluBI AGCT 4 cut(s) 61, 75, 618, 969
AluI AGCT 4 cut(s) 61, 75, 618, 969
Alw21I GWGCWC 1 cut(s) 535
Alw26I GTCTC 2 cut(s) 198, 1096
AlwI GGATC 2 cut(s) 352, 504
AlwNI CAGNNNCTG 1 cut(s) 142
AoxI GGCC 4 cut(s) 120, 213, 517, 865
ApeKI GCWGC 7 cut(s) 46, 72, 222, 550, 553, 715, 1347
ApoI RAATTY 2 cut(s) 459, 1029
ArsI GACNNNNNNTTYG 2 cut(s) 1322, 1354
AspLEI GCGC 3 cut(s) 46, 142, 1145
AspS9I GGNCC 1 cut(s) 866
AsuC2I CCSGG 2 cut(s) 301, 1239
AsuHPI GGTGA 6 cut(s) 137, 193, 428, 491, 893, 1070
AsuII TTCGAA 1 cut(s) 1341
BaeGI GKGCMC 2 cut(s) 444, 477
BanI GGYRCC 1 cut(s) 331
BanII GRGCYC 1 cut(s) 373
BarI GAAGNNNNNNTAC 2 cut(s) 764, 796
BauI CACGAG 1 cut(s) 372
Bbv12I GWGCWC 1 cut(s) 535
BbvI GCAGC 7 cut(s) 33, 84, 234, 537, 565, 702, 1334
BccI CCATC 5 cut(s) 662, 680, 942, 1133, 1163
BceAI ACGGC 1 cut(s) 101
BciT130I CCWGG 1 cut(s) 766
BclI TGATCA 2 cut(s) 738, 796
BcnI CCSGG 2 cut(s) 301, 1239
BcoDI GTCTC 2 cut(s) 198, 1096
BfaI CTAG 1 cut(s) 731
BfmI CTRYAG 4 cut(s) 551, 716, 1111, 1348
BfoI RGCGCY 3 cut(s) 47, 143, 1146
BisI GCNGC 8 cut(s) 42, 47, 73, 223, 551, 554, 716, 1348
BlsI GCNGC 8 cut(s) 43, 48, 74, 224, 552, 555, 717, 1349
Bme1390I CCNGG 3 cut(s) 301, 766, 1239
BmgT120I GGNCC 1 cut(s) 866
BmiI GGNNCC 2 cut(s) 333, 916
BmrFI CCNGG 3 cut(s) 301, 766, 1239
BmsI GCATC 1 cut(s) 1251
BpmI CTGGAG 1 cut(s) 1068
Bpu14I TTCGAA 1 cut(s) 1341
BpuMI CCSGG 2 cut(s) 301, 1239
BsaBI GATNNNNATC 2 cut(s) 495, 1224
BsaHI GRCGYC 1 cut(s) 1075
BsaI GGTCTC 1 cut(s) 198
BsaJI CCNNGG 3 cut(s) 117, 300, 764
BsaXI ACNNNNNCTCC 2 cut(s) 522, 552
Bsc4I CCNNNNNNNGG 4 cut(s) 341, 487, 686, 1106
Bse118I RCCGGY 3 cut(s) 122, 726, 1197
Bse3DI GCAATG 1 cut(s) 1037
Bse8I GATNNNNATC 2 cut(s) 495, 1224
BseBI CCWGG 1 cut(s) 766
BseDI CCNNGG 3 cut(s) 117, 300, 764
BseGI GGATG 8 cut(s) 193, 322, 496, 673, 1033, 1123, 1189, 1225
BseJI GATNNNNATC 2 cut(s) 495, 1224
BseLI CCNNNNNNNGG 4 cut(s) 341, 487, 686, 1106
BseMI GCAATG 1 cut(s) 1037
BseMII CTCAG 3 cut(s) 605, 876, 1391
BseRI GAGGAG 1 cut(s) 1365
BseSI GKGCMC 2 cut(s) 444, 477
BseXI GCAGC 7 cut(s) 33, 84, 234, 537, 565, 702, 1334
Bsh1285I CGRYCG 1 cut(s) 457
BshFI GGCC 4 cut(s) 122, 215, 519, 867
BshNI GGYRCC 1 cut(s) 331
BsiEI CGRYCG 1 cut(s) 457
BsiHKAI GWGCWC 1 cut(s) 535
BsiSI CCGG 7 cut(s) 123, 300, 528, 727, 1198, 1238, 1305
BslFI GGGAC 1 cut(s) 661
BslI CCNNNNNNNGG 4 cut(s) 341, 487, 686, 1106
BsmAI GTCTC 2 cut(s) 198, 1096
BsmFI GGGAC 1 cut(s) 661
BsmI GAATGC 2 cut(s) 174, 638
BsnI GGCC 4 cut(s) 122, 215, 519, 867
Bso31I GGTCTC 1 cut(s) 198
Bsp119I TTCGAA 1 cut(s) 1341
Bsp1286I GDGCHC 4 cut(s) 373, 444, 477, 535
Bsp143I GATC 7 cut(s) 127, 344, 496, 738, 796, 1270, 1318
BspACI CCGC 3 cut(s) 41, 114, 305
BspANI GGCC 4 cut(s) 122, 215, 519, 867
BspCNI CTCAG 3 cut(s) 606, 875, 1390
BspLI GGNNCC 2 cut(s) 333, 916
BspMAI CTGCAG 3 cut(s) 555, 720, 1352
BspPI GGATC 2 cut(s) 352, 504
BspT104I TTCGAA 1 cut(s) 1341
BspT107I GGYRCC 1 cut(s) 331
BspTNI GGTCTC 1 cut(s) 198
BsrDI GCAATG 1 cut(s) 1037
BsrFI RCCGGY 3 cut(s) 122, 726, 1197
BssAI RCCGGY 3 cut(s) 122, 726, 1197
BssECI CCNNGG 3 cut(s) 117, 300, 764
BssMI GATC 7 cut(s) 127, 344, 496, 738, 796, 1270, 1318
BssNI GRCGYC 1 cut(s) 1075
BssSI CACGAG 1 cut(s) 372
Bst2BI CACGAG 1 cut(s) 372
Bst2UI CCWGG 1 cut(s) 766
Bst4CI ACNGT 1 cut(s) 1009
Bst6I CTCTTC 1 cut(s) 1179
BstACI GRCGYC 1 cut(s) 1075
BstAPI GCANNNNNTGC 1 cut(s) 559
BstBI TTCGAA 1 cut(s) 1341
BstC8I GCNNGC 4 cut(s) 138, 227, 564, 728
BstDEI CTNAG 4 cut(s) 614, 862, 978, 1377
BstDSI CCRYGG 1 cut(s) 117
BstF5I GGATG 8 cut(s) 193, 322, 496, 673, 1033, 1123, 1189, 1225
BstH2I RGCGCY 3 cut(s) 47, 143, 1146
BstHHI GCGC 3 cut(s) 46, 142, 1145
BstKTI GATC 7 cut(s) 130, 347, 499, 741, 799, 1273, 1321
BstMAI GTCTC 2 cut(s) 198, 1096
BstMBI GATC 7 cut(s) 127, 344, 496, 738, 796, 1270, 1318
BstMCI CGRYCG 1 cut(s) 457
BstMWI GCNNNNNNNGC 3 cut(s) 160, 559, 572
BstNI CCWGG 1 cut(s) 766
BstNSI RCATGY 2 cut(s) 88, 1361
BstSCI CCNGG 3 cut(s) 299, 764, 1237
BstSFI CTRYAG 4 cut(s) 551, 716, 1111, 1348
BstSLI GKGCMC 2 cut(s) 444, 477
BstV1I GCAGC 7 cut(s) 33, 84, 234, 537, 565, 702, 1334
BstX2I RGATCY 1 cut(s) 344
BstYI RGATCY 1 cut(s) 344
BsuRI GGCC 4 cut(s) 122, 215, 519, 867
BtgI CCRYGG 1 cut(s) 117
BtsCI GGATG 8 cut(s) 193, 322, 496, 673, 1033, 1123, 1189, 1225
Cac8I GCNNGC 4 cut(s) 138, 227, 564, 728
CaiI CAGNNNCTG 1 cut(s) 142
CfoI GCGC 3 cut(s) 46, 142, 1145
Cfr10I RCCGGY 3 cut(s) 122, 726, 1197
Cfr13I GGNCC 1 cut(s) 866
CseI GACGC 1 cut(s) 1064
Csp6I GTAC 4 cut(s) 91, 611, 984, 1249
CspCI CAANNNNNGTGG 2 cut(s) 418, 453
CviAII CATG 5 cut(s) 85, 248, 813, 1162, 1358
CviQI GTAC 4 cut(s) 91, 611, 984, 1249
DdeI CTNAG 4 cut(s) 614, 862, 978, 1377
DpnI GATC 7 cut(s) 129, 346, 498, 740, 798, 1272, 1320
DpnII GATC 7 cut(s) 127, 344, 496, 738, 796, 1270, 1318
EaeI YGGCCR 3 cut(s) 120, 213, 517
Eam1104I CTCTTC 1 cut(s) 1179
EarI CTCTTC 1 cut(s) 1179
EciI GGCGGA 1 cut(s) 320
Eco24I GRGCYC 1 cut(s) 373
Eco31I GGTCTC 1 cut(s) 198
Eco57I CTGAAG 2 cut(s) 791, 949
EcoRI GAATTC 1 cut(s) 1029
EcoRII CCWGG 1 cut(s) 764
EcoT38I GRGCYC 1 cut(s) 373
FaeI CATG 5 cut(s) 88, 251, 816, 1165, 1361
FaqI GGGAC 1 cut(s) 661
FatI CATG 5 cut(s) 84, 247, 812, 1161, 1357
FbaI TGATCA 2 cut(s) 738, 796
Fnu4HI GCNGC 8 cut(s) 42, 47, 73, 223, 551, 554, 716, 1348
FokI GGATG 8 cut(s) 200, 329, 503, 680, 1020, 1130, 1176, 1212
FriOI GRGCYC 1 cut(s) 373
Fsp4HI GCNGC 8 cut(s) 42, 47, 73, 223, 551, 554, 716, 1348
FspBI CTAG 1 cut(s) 731
GlaI GCGC 3 cut(s) 45, 141, 1144
GluI GCNGC 8 cut(s) 42, 47, 73, 223, 551, 554, 716, 1348
GsuI CTGGAG 1 cut(s) 1068
HaeII RGCGCY 3 cut(s) 47, 143, 1146
HaeIII GGCC 4 cut(s) 122, 215, 519, 867
HapII CCGG 7 cut(s) 123, 300, 528, 727, 1198, 1238, 1305
HgaI GACGC 1 cut(s) 1064
HhaI GCGC 3 cut(s) 46, 142, 1145
Hin1I GRCGYC 1 cut(s) 1075
Hin1II CATG 5 cut(s) 88, 251, 816, 1165, 1361
Hin6I GCGC 3 cut(s) 44, 140, 1143
HinP1I GCGC 3 cut(s) 44, 140, 1143
HinfI GANTC 4 cut(s) 405, 889, 1214, 1291
HpaII CCGG 7 cut(s) 123, 300, 528, 727, 1198, 1238, 1305
HphI GGTGA 6 cut(s) 137, 193, 428, 491, 893, 1070
Hpy188I TCNGA 6 cut(s) 58, 791, 1028, 1219, 1323, 1380
Hpy188III TCNNGA 5 cut(s) 157, 374, 633, 1085, 1295
HpyAV CCTTC 7 cut(s) 178, 307, 388, 766, 955, 985, 1023
HpyCH4III ACNGT 1 cut(s) 1009
HpyCH4IV ACGT 1 cut(s) 168
HpyCH4V TGCA 6 cut(s) 49, 553, 718, 1060, 1234, 1350
HpyF10VI GCNNNNNNNGC 3 cut(s) 160, 559, 572
HpyF3I CTNAG 4 cut(s) 614, 862, 978, 1377
HpySE526I ACGT 1 cut(s) 168
Hsp92I GRCGYC 1 cut(s) 1075
Hsp92II CATG 5 cut(s) 88, 251, 816, 1165, 1361
HspAI GCGC 3 cut(s) 44, 140, 1143
KroI GCCGGC 1 cut(s) 726
KroNI GCCGGC 1 cut(s) 728
Ksp22I TGATCA 2 cut(s) 738, 796
Kzo9I GATC 7 cut(s) 127, 344, 496, 738, 796, 1270, 1318
LmnI GCTCC 4 cut(s) 58, 530, 635, 920
Lsp1109I GCAGC 7 cut(s) 33, 84, 234, 537, 565, 702, 1334
LweI GCATC 1 cut(s) 1251
MaeI CTAG 1 cut(s) 731
MaeII ACGT 1 cut(s) 168
MaeIII GTNAC 2 cut(s) 1003, 1076
MalI GATC 7 cut(s) 129, 346, 498, 740, 798, 1272, 1320
MboI GATC 7 cut(s) 127, 344, 496, 738, 796, 1270, 1318
MboII GAAGA 7 cut(s) 322, 431, 695, 829, 1166, 1169, 1273
MfeI CAATTG 1 cut(s) 1182
MflI RGATCY 1 cut(s) 344
MhlI GDGCHC 4 cut(s) 373, 444, 477, 535
MluCI AATT 8 cut(s) 50, 377, 449, 459, 604, 705, 1029, 1182
MlyI GAGTC 1 cut(s) 414
MnlI CCTC 9 cut(s) 184, 487, 818, 825, 860, 1092, 1114, 1182, 1386
MroNI GCCGGC 1 cut(s) 726
MseI TTAA 3 cut(s) 620, 804, 927
MslI CAYNNNNRTG 3 cut(s) 116, 179, 1160
MspI CCGG 7 cut(s) 123, 300, 528, 727, 1198, 1238, 1305
MspR9I CCNGG 3 cut(s) 301, 766, 1239
MunI CAATTG 1 cut(s) 1182
Mva1269I GAATGC 2 cut(s) 174, 638
MvaI CCWGG 1 cut(s) 766
MwoI GCNNNNNNNGC 3 cut(s) 160, 559, 572
NaeI GCCGGC 1 cut(s) 728
NciI CCSGG 2 cut(s) 301, 1239
NdeII GATC 7 cut(s) 127, 344, 496, 738, 796, 1270, 1318
NgoMIV GCCGGC 1 cut(s) 726
NlaIII CATG 5 cut(s) 88, 251, 816, 1165, 1361
NlaIV GGNNCC 2 cut(s) 333, 916
NmuCI GTSAC 2 cut(s) 1003, 1076
NspI RCATGY 2 cut(s) 88, 1361
NspV TTCGAA 1 cut(s) 1341
OliI CACNNNNGTG 1 cut(s) 116
PctI GAATGC 2 cut(s) 174, 638
PdiI GCCGGC 1 cut(s) 728
PfeI GAWTC 3 cut(s) 889, 1214, 1291
PflMI CCANNNNNTGG 1 cut(s) 686
PkrI GCNGC 8 cut(s) 43, 48, 74, 224, 552, 555, 717, 1349
PleI GAGTC 1 cut(s) 413
PpsI GAGTC 1 cut(s) 413
Psp6I CCWGG 1 cut(s) 764
PspGI CCWGG 1 cut(s) 764
PspN4I GGNNCC 2 cut(s) 333, 916
PspPI GGNCC 1 cut(s) 866
PstI CTGCAG 3 cut(s) 555, 720, 1352
PstNI CAGNNNCTG 1 cut(s) 142
PsuI RGATCY 1 cut(s) 344
RsaI GTAC 4 cut(s) 92, 612, 985, 1250
RsaNI GTAC 4 cut(s) 91, 611, 984, 1249
RseI CAYNNNNRTG 3 cut(s) 116, 179, 1160
SaqAI TTAA 3 cut(s) 620, 804, 927
SatI GCNGC 8 cut(s) 42, 47, 73, 223, 551, 554, 716, 1348
Sau3AI GATC 7 cut(s) 127, 344, 496, 738, 796, 1270, 1318
Sau96I GGNCC 1 cut(s) 866
SchI GAGTC 1 cut(s) 414
ScrFI CCNGG 3 cut(s) 301, 766, 1239
SduI GDGCHC 4 cut(s) 373, 444, 477, 535
SfaNI GCATC 1 cut(s) 1251
SfcI CTRYAG 4 cut(s) 551, 716, 1111, 1348
SfuI TTCGAA 1 cut(s) 1341
SmiMI CAYNNNNRTG 3 cut(s) 116, 179, 1160
Sse9I AATT 8 cut(s) 50, 377, 449, 459, 604, 705, 1029, 1182
SsiI CCGC 3 cut(s) 41, 114, 305
SspMI CTAG 1 cut(s) 731
StyD4I CCNGG 3 cut(s) 299, 764, 1237
TaaI ACNGT 1 cut(s) 1009
TaiI ACGT 1 cut(s) 171
TaqI TCGA 4 cut(s) 158, 408, 457, 1341
TaqII GACCGA 1 cut(s) 443
TasI AATT 8 cut(s) 50, 377, 449, 459, 604, 705, 1029, 1182
TauI GCSGC 1 cut(s) 44
TfiI GAWTC 3 cut(s) 889, 1214, 1291
Tru1I TTAA 3 cut(s) 620, 804, 927
Tru9I TTAA 3 cut(s) 620, 804, 927
TseFI GTSAC 2 cut(s) 1003, 1076
TseI GCWGC 7 cut(s) 46, 72, 222, 550, 553, 715, 1347
Tsp45I GTSAC 2 cut(s) 1003, 1076
TspDTI ATGAA 4 cut(s) 236, 1022, 1227, 1273
TspGWI ACGGA 1 cut(s) 533
Van91I CCANNNNNTGG 1 cut(s) 686
XapI RAATTY 2 cut(s) 459, 1029
XceI RCATGY 2 cut(s) 88, 1361
XcmI CCANNNNNNNNNTGG 1 cut(s) 994
XspI CTAG 1 cut(s) 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.