Rh4CG344900

palmitoyl-(protein) hydrolase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0007162
Physical Location & Seq
Forward (+)
60438316 .. 60441641
3326 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG344900.1

Sequence Viewer

Length: 1401 bp
ATGTACGGTAGTGTGAGGAAGATGATCAGATTATGGATAGCCGCACTGCAATTTTCGGAGCTGTTTGTGAGCACCATGGTTCATTTGCTTTATGGCTTTTACATATTCAGCTCCGCCGTCGCCGGTGACCTCTCGCTGGCCTTGAATGAGCTCTTGTGTAAGCCCAACACCGACACGAAAGAGTTGGTGCCCACTGAGACCTCGGCGGCCAATGGGGCTCTGCCTCCTATTGTTTTGGTCCATGGGATTTTCGGCTTTGGCAAAGGGAGGCTGGGAGGTTTGTCGTATTTCGCCGGAGCTGAGAAGAAAGACGAGAGGGTTCTGGTGCCGGATTTGGGATCTCTGACCAGCGTTTACGACAGGGCTCGTGAGTTGTTCTACTATTTGAAAGGTGGGCGGGTCGATTATGGTGAAGAACACAGCAAAGCCTGTGGGCATTCCCAGTTTGGCCGTCTGTATGAACAAGGGCACTACCCTGAATGGGATGAGGATCATCCTATTCACTTTGTGGGCCATTCCGCCGGAGCTCAGGTCGTCCGTGTTCTGCAGCAAATGCTTGCTGATAAGGCTTTCAAGGGGTATGAGAATACTAACGAGAATTGGGTATTGAGCATCACATCATTGTCCGGAGCGTTCAATGGGACTACAAGAACTTACTTGGATGGAATGCAGCCTGAGGATGGCAAAACCCTGAAGCCCATATGTCTGCTGCAACTATGTCGCATAGGAGTGATTATTTATGACTGGCTAGACATTTCCTGGCTAAAGGAATATTACAACTTTGGGTTTGATCACTATAATATCACATGGAAGAAAGTCGGTGTTTGGGGTCTCATTGATTGCCTCTTGGGAAATTCGGGACCATTCGCTTCTGGGGATTGGATCCTCCCTGACCTTACAATTCAAGGTTCCATAAGACTCAACAGCCATCTACAGTCCTTTCCAAACACATACTACTTCAGCTATGCCACAAAGCGCACTAGGAAGATATGGGGTGTCACACTTCCTTCTAGCATATTCGGAATTCACCCTCTGCTTTTCATCAGAGTGCTGCAGATGAGCCAATGGCGTCATCCTCCTGATGTCTCTCCCCCATATAAGGGTTACAGAGATGAGGATTGGCAAGAAAATGATGGAGCTCTCAATACCATCTCCATGACTCGCCCTCTTCTTCCAGTTGAACACCCAGGCCGTTTTGTGAAAGATGATTCAGAGTGCCACCCCTTGCAACCAGGCATCTGGTACTACAAGATTGTGGAAGCTGATCACATATTCTTCATTGTGAATCGGGAGAGAGCAGGAGTTCAATTTGATCTGATATATGACAGCATTTTTGAAAGGTGCAGAAAGCATGTATTTAGAAAAACTCCACCAACATTACCCAACCAAACGCACCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

466

Amino Acids

53.16

Weight (kDa)

6.65

Isoelectric Point (pI)

34.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lip_C PF24708 76 - 188 2.5e-20 Lipase-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 187, 325
AccIII TCCGGA 1 cut(s) 626
AciI CCGC 5 cut(s) 42, 114, 206, 397, 519
AclWI GGATC 4 cut(s) 346, 498, 877, 890
AcoI YGGCCR 2 cut(s) 207, 448
AcsI RAATTY 2 cut(s) 853, 1023
AcuI CTGAAG 2 cut(s) 713, 943
AcyI GRCGYC 1 cut(s) 1069
AdeI CACNNNGTG 1 cut(s) 508
AfaI GTAC 2 cut(s) 5, 1244
AfiI CCNNNNNNNGG 6 cut(s) 136, 335, 481, 680, 1099, 1100
AgsI TTSAA 8 cut(s) 145, 388, 574, 637, 905, 1181, 1307, 1337
AjnI CCWGG 3 cut(s) 758, 1186, 1231
AluBI AGCT 8 cut(s) 61, 111, 151, 299, 527, 963, 1139, 1262
AluI AGCT 8 cut(s) 61, 111, 151, 299, 527, 963, 1139, 1262
Alw21I GWGCWC 4 cut(s) 74, 153, 529, 1141
Alw26I GTCTC 3 cut(s) 191, 836, 1090
AlwI GGATC 4 cut(s) 346, 498, 877, 890
Aor13HI TCCGGA 1 cut(s) 626
AoxI GGCC 5 cut(s) 138, 207, 448, 511, 1189
ApeKI GCWGC 4 cut(s) 547, 670, 709, 1051
ApoI RAATTY 2 cut(s) 853, 1023
ArsI GACNNNNNNTTYG 2 cut(s) 1316, 1348
AspLEI GCGC 1 cut(s) 978
AspS9I GGNCC 3 cut(s) 238, 511, 860
AsuHPI GGTGA 3 cut(s) 137, 422, 1019
AvaII GGWCC 2 cut(s) 238, 860
AxyI CCTNAGG 1 cut(s) 675
BaeGI GKGCMC 2 cut(s) 192, 471
BamHI GGATCC 1 cut(s) 882
BanI GGYRCC 2 cut(s) 187, 325
BanII GRGCYC 5 cut(s) 153, 220, 367, 529, 1141
BauI CACGAG 1 cut(s) 366
Bbv12I GWGCWC 4 cut(s) 74, 153, 529, 1141
BbvI GCAGC 4 cut(s) 559, 682, 696, 1038
BccI CCATC 5 cut(s) 656, 674, 936, 1127, 1157
BceAI ACGGC 3 cut(s) 101, 435, 1176
BcgI CGANNNNNNTGC 2 cut(s) 701, 735
BciT130I CCWGG 3 cut(s) 760, 1188, 1233
BclI TGATCA 3 cut(s) 24, 790, 1264
BcoDI GTCTC 3 cut(s) 191, 836, 1090
BfaI CTAG 3 cut(s) 749, 981, 1011
BfmI CTRYAG 3 cut(s) 545, 932, 1052
BglI GCCNNNNNGGC 1 cut(s) 215
BisI GCNGC 6 cut(s) 42, 207, 548, 671, 710, 1052
BlsI GCNGC 6 cut(s) 43, 208, 549, 672, 711, 1053
Bme1390I CCNGG 3 cut(s) 760, 1188, 1233
Bme18I GGWCC 2 cut(s) 238, 860
BmgT120I GGNCC 3 cut(s) 238, 511, 860
BmiI GGNNCC 5 cut(s) 189, 327, 861, 884, 910
BmrFI CCNGG 3 cut(s) 760, 1188, 1233
BmrI ACTGGG 1 cut(s) 436
BmsI GCATC 2 cut(s) 621, 1245
BmuI ACTGGG 1 cut(s) 436
Bpu10I CCTNAGC 1 cut(s) 528
BsaBI GATNNNNATC 1 cut(s) 489
BsaHI GRCGYC 1 cut(s) 1069
BsaI GGTCTC 2 cut(s) 191, 836
BsaJI CCNNGG 4 cut(s) 75, 201, 241, 1186
BsaWI WCCGGW 1 cut(s) 626
BsaXI ACNNNNNCTCC 2 cut(s) 516, 546
Bsc4I CCNNNNNNNGG 6 cut(s) 136, 335, 481, 680, 1099, 1100
Bse118I RCCGGY 1 cut(s) 122
Bse1I ACTGG 3 cut(s) 442, 749, 1175
Bse21I CCTNAGG 1 cut(s) 675
Bse8I GATNNNNATC 1 cut(s) 489
BseAI TCCGGA 1 cut(s) 626
BseBI CCWGG 3 cut(s) 760, 1188, 1233
BseDI CCNNGG 4 cut(s) 75, 201, 241, 1186
BseGI GGATG 5 cut(s) 490, 493, 667, 685, 1072
BseJI GATNNNNATC 1 cut(s) 489
BseLI CCNNNNNNNGG 6 cut(s) 136, 335, 481, 680, 1099, 1100
BseMII CTCAG 4 cut(s) 186, 291, 542, 666
BseNI ACTGG 3 cut(s) 442, 749, 1175
BseSI GKGCMC 2 cut(s) 192, 471
BseXI GCAGC 4 cut(s) 559, 682, 696, 1038
BseYI CCCAGC 1 cut(s) 271
BsgI GTGCAG 1 cut(s) 1363
BshFI GGCC 5 cut(s) 140, 209, 450, 513, 1191
BshNI GGYRCC 2 cut(s) 187, 325
BsiHKAI GWGCWC 4 cut(s) 74, 153, 529, 1141
BsiSI CCGG 5 cut(s) 123, 294, 329, 522, 627
BslFI GGGAC 2 cut(s) 655, 873
BslI CCNNNNNNNGG 6 cut(s) 136, 335, 481, 680, 1099, 1100
BsmAI GTCTC 3 cut(s) 191, 836, 1090
BsmFI GGGAC 2 cut(s) 655, 873
BsmI GAATGC 2 cut(s) 436, 672
BsnI GGCC 5 cut(s) 140, 209, 450, 513, 1191
Bso31I GGTCTC 2 cut(s) 191, 836
Bsp1286I GDGCHC 8 cut(s) 74, 153, 192, 220, 367, 471, 529, 1141
Bsp13I TCCGGA 1 cut(s) 626
Bsp143I GATC 7 cut(s) 24, 338, 490, 790, 882, 1264, 1312
Bsp19I CCATGG 2 cut(s) 75, 241
BspACI CCGC 5 cut(s) 42, 114, 206, 397, 519
BspANI GGCC 5 cut(s) 140, 209, 450, 513, 1191
BspCNI CTCAG 4 cut(s) 187, 292, 541, 667
BspEI TCCGGA 1 cut(s) 626
BspLI GGNNCC 5 cut(s) 189, 327, 861, 884, 910
BspMAI CTGCAG 2 cut(s) 549, 1056
BspPI GGATC 4 cut(s) 346, 498, 877, 890
BspT107I GGYRCC 2 cut(s) 187, 325
BspTNI GGTCTC 2 cut(s) 191, 836
BsrFI RCCGGY 1 cut(s) 122
BsrI ACTGG 3 cut(s) 442, 749, 1175
BssAI RCCGGY 1 cut(s) 122
BssECI CCNNGG 4 cut(s) 75, 201, 241, 1186
BssMI GATC 7 cut(s) 24, 338, 490, 790, 882, 1264, 1312
BssNI GRCGYC 1 cut(s) 1069
BssSI CACGAG 1 cut(s) 366
BssT1I CCWWGG 2 cut(s) 75, 241
Bst2BI CACGAG 1 cut(s) 366
Bst2UI CCWGG 3 cut(s) 760, 1188, 1233
Bst4CI ACNGT 2 cut(s) 8, 936
Bst6I CTCTTC 1 cut(s) 1173
BstACI GRCGYC 1 cut(s) 1069
BstAPI GCANNNNNTGC 1 cut(s) 553
BstC8I GCNNGC 2 cut(s) 138, 558
BstDEI CTNAG 4 cut(s) 195, 300, 528, 675
BstDSI CCRYGG 2 cut(s) 75, 241
BstEII GGTNACC 1 cut(s) 125
BstF5I GGATG 5 cut(s) 490, 493, 667, 685, 1072
BstHHI GCGC 1 cut(s) 978
BstKTI GATC 7 cut(s) 27, 341, 493, 793, 885, 1267, 1315
BstMAI GTCTC 3 cut(s) 191, 836, 1090
BstMBI GATC 7 cut(s) 24, 338, 490, 790, 882, 1264, 1312
BstMWI GCNNNNNNNGC 3 cut(s) 215, 553, 566
BstNI CCWGG 3 cut(s) 760, 1188, 1233
BstNSI RCATGY 1 cut(s) 1355
BstPI GGTNACC 1 cut(s) 125
BstSCI CCNGG 3 cut(s) 758, 1186, 1231
BstSFI CTRYAG 3 cut(s) 545, 932, 1052
BstSLI GKGCMC 2 cut(s) 192, 471
BstV1I GCAGC 4 cut(s) 559, 682, 696, 1038
BstX2I RGATCY 2 cut(s) 338, 882
BstXI CCANNNNNNTGG 1 cut(s) 1239
BstYI RGATCY 2 cut(s) 338, 882
Bsu36I CCTNAGG 1 cut(s) 675
BsuRI GGCC 5 cut(s) 140, 209, 450, 513, 1191
BtgI CCRYGG 2 cut(s) 75, 241
BtsCI GGATG 5 cut(s) 490, 493, 667, 685, 1072
BtsI GCAGTG 1 cut(s) 44
BtsIMutI CAGTG 2 cut(s) 44, 192
Cac8I GCNNGC 2 cut(s) 138, 558
CfoI GCGC 1 cut(s) 978
Cfr10I RCCGGY 1 cut(s) 122
Cfr13I GGNCC 3 cut(s) 238, 511, 860
CseI GACGC 1 cut(s) 1058
Csp6I GTAC 2 cut(s) 4, 1243
CspCI CAANNNNNGTGG 2 cut(s) 412, 447
CviAII CATG 5 cut(s) 76, 242, 807, 1156, 1352
CviQI GTAC 2 cut(s) 4, 1243
DdeI CTNAG 4 cut(s) 195, 300, 528, 675
DpnI GATC 7 cut(s) 26, 340, 492, 792, 884, 1266, 1314
DpnII GATC 7 cut(s) 24, 338, 490, 790, 882, 1264, 1312
DraIII CACNNNGTG 1 cut(s) 508
EaeI YGGCCR 2 cut(s) 207, 448
Eam1104I CTCTTC 1 cut(s) 1173
EarI CTCTTC 1 cut(s) 1173
EciI GGCGGA 2 cut(s) 103, 508
Ecl136II GAGCTC 3 cut(s) 151, 527, 1139
Eco130I CCWWGG 2 cut(s) 75, 241
Eco24I GRGCYC 5 cut(s) 153, 220, 367, 529, 1141
Eco31I GGTCTC 2 cut(s) 191, 836
Eco47I GGWCC 2 cut(s) 238, 860
Eco53kI GAGCTC 3 cut(s) 151, 527, 1139
Eco57I CTGAAG 2 cut(s) 713, 943
Eco81I CCTNAGG 1 cut(s) 675
Eco91I GGTNACC 1 cut(s) 125
EcoICRI GAGCTC 3 cut(s) 151, 527, 1139
EcoO65I GGTNACC 1 cut(s) 125
EcoRI GAATTC 1 cut(s) 1023
EcoRII CCWGG 3 cut(s) 758, 1186, 1231
EcoT14I CCWWGG 2 cut(s) 75, 241
EcoT38I GRGCYC 5 cut(s) 153, 220, 367, 529, 1141
ErhI CCWWGG 2 cut(s) 75, 241
FaeI CATG 5 cut(s) 79, 245, 810, 1159, 1355
FaqI GGGAC 2 cut(s) 655, 873
FatI CATG 5 cut(s) 75, 241, 806, 1155, 1351
FauI CCCGC 1 cut(s) 390
FauNDI CATATG 1 cut(s) 701
FbaI TGATCA 3 cut(s) 24, 790, 1264
Fnu4HI GCNGC 6 cut(s) 42, 207, 548, 671, 710, 1052
FokI GGATG 5 cut(s) 480, 497, 674, 692, 1059
FriOI GRGCYC 5 cut(s) 153, 220, 367, 529, 1141
Fsp4HI GCNGC 6 cut(s) 42, 207, 548, 671, 710, 1052
FspBI CTAG 3 cut(s) 749, 981, 1011
GlaI GCGC 1 cut(s) 977
GluI GCNGC 6 cut(s) 42, 207, 548, 671, 710, 1052
GsaI CCCAGC 1 cut(s) 275
HaeIII GGCC 5 cut(s) 140, 209, 450, 513, 1191
HapII CCGG 5 cut(s) 123, 294, 329, 522, 627
HgaI GACGC 1 cut(s) 1058
HhaI GCGC 1 cut(s) 978
Hin1I GRCGYC 1 cut(s) 1069
Hin1II CATG 5 cut(s) 79, 245, 810, 1159, 1355
Hin6I GCGC 1 cut(s) 976
HinP1I GCGC 1 cut(s) 976
HinfI GANTC 4 cut(s) 918, 1159, 1208, 1285
HpaII CCGG 5 cut(s) 123, 294, 329, 522, 627
HphI GGTGA 3 cut(s) 137, 422, 1019
Hpy166II GTNNAC 1 cut(s) 355
Hpy188I TCNGA 7 cut(s) 29, 58, 345, 1022, 1046, 1213, 1317
Hpy188III TCNNGA 5 cut(s) 368, 627, 858, 1079, 1289
Hpy8I GTNNAC 1 cut(s) 355
Hpy99I CGWCG 1 cut(s) 122
HpyAV CCTTC 1 cut(s) 1017
HpyCH4III ACNGT 2 cut(s) 8, 936
HpyCH4V TGCA 7 cut(s) 49, 547, 670, 712, 1054, 1228, 1344
HpyF10VI GCNNNNNNNGC 3 cut(s) 215, 553, 566
HpyF3I CTNAG 4 cut(s) 195, 300, 528, 675
Hsp92I GRCGYC 1 cut(s) 1069
Hsp92II CATG 5 cut(s) 79, 245, 810, 1159, 1355
HspAI GCGC 1 cut(s) 976
Kpn2I TCCGGA 1 cut(s) 626
Ksp22I TGATCA 3 cut(s) 24, 790, 1264
Kzo9I GATC 7 cut(s) 24, 338, 490, 790, 882, 1264, 1312
LmnI GCTCC 6 cut(s) 58, 116, 296, 524, 629, 1136
Lsp1109I GCAGC 4 cut(s) 559, 682, 696, 1038
LweI GCATC 2 cut(s) 621, 1245
MaeI CTAG 3 cut(s) 749, 981, 1011
MaeIII GTNAC 3 cut(s) 125, 997, 1103
MalI GATC 7 cut(s) 26, 340, 492, 792, 884, 1266, 1314
MboI GATC 7 cut(s) 24, 338, 490, 790, 882, 1264, 1312
MboII GAAGA 8 cut(s) 31, 316, 425, 823, 997, 1160, 1163, 1267
MflI RGATCY 2 cut(s) 338, 882
MhlI GDGCHC 8 cut(s) 74, 153, 192, 220, 367, 471, 529, 1141
MluCI AATT 6 cut(s) 50, 598, 853, 900, 1023, 1307
MlyI GAGTC 2 cut(s) 912, 1153
MroI TCCGGA 1 cut(s) 626
MslI CAYNNNNRTG 3 cut(s) 728, 1046, 1154
MspI CCGG 5 cut(s) 123, 294, 329, 522, 627
MspR9I CCNGG 3 cut(s) 760, 1188, 1233
Mva1269I GAATGC 2 cut(s) 436, 672
MvaI CCWGG 3 cut(s) 760, 1188, 1233
MwoI GCNNNNNNNGC 3 cut(s) 215, 553, 566
NcoI CCATGG 2 cut(s) 75, 241
NdeI CATATG 1 cut(s) 701
NdeII GATC 7 cut(s) 24, 338, 490, 790, 882, 1264, 1312
NlaIII CATG 5 cut(s) 79, 245, 810, 1159, 1355
NlaIV GGNNCC 5 cut(s) 189, 327, 861, 884, 910
NmeAIII GCCGAG 1 cut(s) 182
NmuCI GTSAC 2 cut(s) 125, 997
NspI RCATGY 1 cut(s) 1355
PctI GAATGC 2 cut(s) 436, 672
PfeI GAWTC 2 cut(s) 1208, 1285
PkrI GCNGC 6 cut(s) 43, 208, 549, 672, 711, 1053
PleI GAGTC 2 cut(s) 912, 1153
PpsI GAGTC 2 cut(s) 912, 1153
Psp124BI GAGCTC 3 cut(s) 153, 529, 1141
Psp6I CCWGG 3 cut(s) 758, 1186, 1231
PspEI GGTNACC 1 cut(s) 125
PspFI CCCAGC 1 cut(s) 271
PspGI CCWGG 3 cut(s) 758, 1186, 1231
PspN4I GGNNCC 5 cut(s) 189, 327, 861, 884, 910
PspPI GGNCC 3 cut(s) 238, 511, 860
PstI CTGCAG 2 cut(s) 549, 1056
PsuI RGATCY 2 cut(s) 338, 882
RsaI GTAC 2 cut(s) 5, 1244
RsaNI GTAC 2 cut(s) 4, 1243
RseI CAYNNNNRTG 3 cut(s) 728, 1046, 1154
SacI GAGCTC 3 cut(s) 153, 529, 1141
SatI GCNGC 6 cut(s) 42, 207, 548, 671, 710, 1052
Sau3AI GATC 7 cut(s) 24, 338, 490, 790, 882, 1264, 1312
Sau96I GGNCC 3 cut(s) 238, 511, 860
SchI GAGTC 2 cut(s) 912, 1153
ScrFI CCNGG 3 cut(s) 760, 1188, 1233
SduI GDGCHC 8 cut(s) 74, 153, 192, 220, 367, 471, 529, 1141
SfaNI GCATC 2 cut(s) 621, 1245
SfcI CTRYAG 3 cut(s) 545, 932, 1052
SgrAI CRCCGGYG 1 cut(s) 122
SinI GGWCC 2 cut(s) 238, 860
SmiMI CAYNNNNRTG 3 cut(s) 728, 1046, 1154
Sse9I AATT 6 cut(s) 50, 598, 853, 900, 1023, 1307
SsiI CCGC 5 cut(s) 42, 114, 206, 397, 519
SspI AATATT 1 cut(s) 773
SspMI CTAG 3 cut(s) 749, 981, 1011
SstI GAGCTC 3 cut(s) 153, 529, 1141
StyD4I CCNGG 3 cut(s) 758, 1186, 1231
StyI CCWWGG 2 cut(s) 75, 241
TaaI ACNGT 2 cut(s) 8, 936
TaqI TCGA 1 cut(s) 402
TasI AATT 6 cut(s) 50, 598, 853, 900, 1023, 1307
TauI GCSGC 2 cut(s) 44, 209
TfiI GAWTC 2 cut(s) 1208, 1285
TscAI CASTG 2 cut(s) 51, 199
TseFI GTSAC 2 cut(s) 125, 997
TseI GCWGC 4 cut(s) 547, 670, 709, 1051
Tsp45I GTSAC 2 cut(s) 125, 997
TspDTI ATGAA 4 cut(s) 71, 474, 1030, 1267
TspGWI ACGGA 1 cut(s) 527
TspRI CASTG 2 cut(s) 51, 199
VpaK11BI GGWCC 2 cut(s) 238, 860
XapI RAATTY 2 cut(s) 853, 1023
XceI RCATGY 1 cut(s) 1355
XspI CTAG 3 cut(s) 749, 981, 1011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.