AT1G10740

palmitoyl-(protein) hydrolase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0007162
Physical Location & Seq
Reverse (-)
3567905 .. 3571053
3149 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G10740.1

Sequence Viewer

Length: 1422 bp
ATGATTAAGTTGTGGATGATGACTTCTCTCCAACTCGCGGAGCTCTTCGTGAGCTCTATTGTGCATTTGCTTTATGGGTTTTATATATTTAGCTCCGCCGTTGCCGGAGATATCTCTCAGACGTTGAATGATTACTTGTTTAAGTCCAATGTCGCTTTCGGAGAAACCGGTCAAAATCAAACCAATGTTGAGGGTTTGCCTCCTATTGTATTGGTTCATGGCATCTTTGGATTTGGCAAAGGGAGATTAGGAGGCTTATCTTACTTTGGCGGTGCTGAGAAGAAAGATGAGAGGGTTCTTGTTCCTGATTTGGGTTCCTTAACAAGCATCTATGACAGGGCAAGGGAATTGTTCTATTATTTGAAAGGAGGGGTAGTTGATTTTGGCGAAGAGCATAGCGAGGCTTGTGGACATTCTCGGTTTGGAAGAAGATACGAACAAGGGCAATACCCTGAATGGGATGAGGATCATCCTATTCATTTTGTGGGGCATTCAGCGGGTGCGCAAGTTGTGCGTGTATTGCAGCAAATGCTTGCAGATCAGGCATTTGAAGGGTTTGAAGAAACGAATGAGAATTGGGTTCTGAGTGTGACATCGTTATCCGGGGCATTCAATGGAACTACCAGGACCTACTTAGATGGCATGCGGACAGATGATGGAGTGAGCATGAAACCGATATGTTTGTTGCAGCTGTGTCGTATAGGCGTGATAATGTACGATTGGTTGGACATTTCATGGCTAAAGACTTATTACAATTTCGGGTTCGATCACTTCAACATTTCTTGGAAGAAGACCGGTGTGAGAGGTCTCGTTGATTGCCTAATGGGAAACGCAGGTCCTTTTGCTTCTGGCGATTGGATCTTACCTGATCTCACAATCCAAGGCTCAACAAGTATTAACTCCAATCTCCAGACGTTCCCAAACACTTACTACTTCAGCTACGCGACTAAACGCACCCGCAGAGTCATGGGTATGACAATCCCTTCAGGTGTTCTTGGAATCCACCCGATGCTCTTCCTCCGCGTCTTTCAGATGAGCCAATGGAAATTCCCACAAGATGTCTCTCCTCCTTATAAAGGCTACAGGGATGAGGACTGGCAAGAGAACGACGGGGCATTGAACACAATATCAATGACACATCCGAGGCTACCTGTTGAGCATCCGAGCCGGTTCATAAGGAGCGATTCGGAATGTCAAACATTACAACCCGGGATCTGGTATTATAAGATAGTGGAAGCAGATCACATAATGTTCATAGTGAACAGAGAGAGAGCTGGTGTTCAGTTTGATCTGATATACGACAGCATCTTCCAACGTTGCAGGAAACATGTTTTTAGAAAGATTCCTCAGACTCTCCCCAATCAATCTCCTTCTTCTCCTCGTTCATCATCATCACCCAGAATAAACAACTTTGTACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

473

Amino Acids

53.81

Weight (kDa)

6.28

Isoelectric Point (pI)

40.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lip_C PF24708 68 - 185 2e-20 Lipase-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1074, 1224
Acc16I TGCGCA 1 cut(s) 504
Acc36I ACCTGC 1 cut(s) 824
AccII CGCG 3 cut(s) 38, 944, 1023
AciI CCGC 7 cut(s) 38, 96, 270, 497, 646, 958, 1021
AclI AACGTT 1 cut(s) 1315
AclWI GGATC 3 cut(s) 474, 866, 1220
AcsI RAATTY 1 cut(s) 1046
AcuI CTGAAG 2 cut(s) 919, 969
AfaI GTAC 2 cut(s) 716, 1416
AfiI CCNNNNNNNGG 5 cut(s) 37, 311, 457, 1076, 1215
AflIII ACRYGT 1 cut(s) 1327
AgeI ACCGGT 2 cut(s) 167, 794
AgsI TTSAA 7 cut(s) 127, 364, 551, 560, 613, 775, 1120
AjnI CCWGG 1 cut(s) 623
AjuI GAANNNNNNNTTGG 2 cut(s) 140, 172
AluBI AGCT 6 cut(s) 43, 54, 93, 691, 939, 1274
AluI AGCT 6 cut(s) 43, 54, 93, 691, 939, 1274
Alw21I GWGCWC 2 cut(s) 45, 56
Alw26I GTCTC 2 cut(s) 812, 1066
AlwI GGATC 3 cut(s) 474, 866, 1220
Ama87I CYCGRG 1 cut(s) 1208
ApeKI GCWGC 2 cut(s) 523, 688
ApoI RAATTY 1 cut(s) 1046
AsiGI ACCGGT 2 cut(s) 167, 794
AspLEI GCGC 1 cut(s) 505
AspS9I GGNCC 2 cut(s) 627, 836
AsuC2I CCSGG 3 cut(s) 604, 1209, 1210
AsuHPI GGTGA 1 cut(s) 1386
AvaI CYCGRG 1 cut(s) 1208
AvaII GGWCC 2 cut(s) 627, 836
BanII GRGCYC 2 cut(s) 45, 56
BbsI GAAGAC 1 cut(s) 797
Bbv12I GWGCWC 2 cut(s) 45, 56
BbvI GCAGC 2 cut(s) 535, 700
BccI CCATC 2 cut(s) 632, 650
BceAI ACGGC 1 cut(s) 83
BcgI CGANNNNNNTGC 2 cut(s) 677, 711
BciT130I CCWGG 1 cut(s) 625
BcnI CCSGG 3 cut(s) 604, 1209, 1210
BcoDI GTCTC 2 cut(s) 812, 1066
BfmI CTRYAG 1 cut(s) 1081
BfuAI ACCTGC 1 cut(s) 824
BisI GCNGC 2 cut(s) 524, 689
BlsI GCNGC 2 cut(s) 525, 690
Bme1390I CCNGG 4 cut(s) 604, 625, 1209, 1210
Bme18I GGWCC 2 cut(s) 627, 836
BmeT110I CYCGRG 1 cut(s) 1208
BmgT120I GGNCC 2 cut(s) 627, 836
BmiI GGNNCC 1 cut(s) 316
BmrFI CCNGG 4 cut(s) 604, 625, 1209, 1210
BmsI GCATC 5 cut(s) 231, 336, 999, 1168, 1314
BpiI GAAGAC 1 cut(s) 797
BpmI CTGGAG 1 cut(s) 893
BpuMI CCSGG 3 cut(s) 604, 1209, 1210
BsaBI GATNNNNATC 1 cut(s) 465
BsaI GGTCTC 1 cut(s) 812
BsaJI CCNNGG 4 cut(s) 603, 880, 1142, 1208
BsaWI WCCGGW 2 cut(s) 167, 794
BsaXI ACNNNNNCTCC 2 cut(s) 360, 390
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 311, 457, 1076, 1215
Bse118I RCCGGY 3 cut(s) 167, 794, 1167
Bse1I ACTGG 1 cut(s) 1100
Bse8I GATNNNNATC 1 cut(s) 465
BseBI CCWGG 1 cut(s) 625
BseDI CCNNGG 4 cut(s) 603, 880, 1142, 1208
BseGI GGATG 6 cut(s) 21, 466, 469, 1093, 1138, 1159
BseJI GATNNNNATC 1 cut(s) 465
BseLI CCNNNNNNNGG 5 cut(s) 37, 311, 457, 1076, 1215
BseMII CTCAG 4 cut(s) 131, 267, 575, 1361
BseNI ACTGG 1 cut(s) 1100
BseRI GAGGAG 2 cut(s) 1056, 1368
BseXI GCAGC 2 cut(s) 535, 700
Bsh1236I CGCG 3 cut(s) 38, 944, 1023
BshTI ACCGGT 2 cut(s) 167, 794
BsiHKAI GWGCWC 2 cut(s) 45, 56
BsiHKCI CYCGRG 1 cut(s) 1208
BsiSI CCGG 6 cut(s) 105, 168, 603, 795, 1168, 1209
BslI CCNNNNNNNGG 5 cut(s) 37, 311, 457, 1076, 1215
BsmAI GTCTC 2 cut(s) 812, 1066
BsmI GAATGC 2 cut(s) 490, 608
Bso31I GGTCTC 1 cut(s) 812
BsoBI CYCGRG 1 cut(s) 1208
Bsp1286I GDGCHC 2 cut(s) 45, 56
Bsp1407I TGTACA 1 cut(s) 1414
Bsp143I GATC 8 cut(s) 466, 538, 766, 858, 868, 1212, 1240, 1288
BspACI CCGC 7 cut(s) 38, 96, 270, 497, 646, 958, 1021
BspCNI CTCAG 4 cut(s) 130, 268, 576, 1360
BspFNI CGCG 3 cut(s) 38, 944, 1023
BspLI GGNNCC 1 cut(s) 316
BspMI ACCTGC 1 cut(s) 824
BspPI GGATC 3 cut(s) 474, 866, 1220
BspQI GCTCTTC 3 cut(s) 50, 384, 1019
BspTNI GGTCTC 1 cut(s) 812
BsrFI RCCGGY 3 cut(s) 167, 794, 1167
BsrGI TGTACA 1 cut(s) 1414
BsrI ACTGG 1 cut(s) 1100
BssAI RCCGGY 3 cut(s) 167, 794, 1167
BssECI CCNNGG 4 cut(s) 603, 880, 1142, 1208
BssMI GATC 8 cut(s) 466, 538, 766, 858, 868, 1212, 1240, 1288
BssT1I CCWWGG 1 cut(s) 880
Bst2UI CCWGG 1 cut(s) 625
Bst6I CTCTTC 3 cut(s) 50, 384, 1019
BstAPI GCANNNNNTGC 2 cut(s) 511, 529
BstAUI TGTACA 1 cut(s) 1414
BstC8I GCNNGC 2 cut(s) 534, 644
BstDEI CTNAG 5 cut(s) 117, 276, 584, 634, 1347
BstENI CCTNNNNNAGG 1 cut(s) 1074
BstF5I GGATG 6 cut(s) 21, 466, 469, 1093, 1138, 1159
BstFNI CGCG 3 cut(s) 38, 944, 1023
BstHHI GCGC 1 cut(s) 505
BstKTI GATC 8 cut(s) 469, 541, 769, 861, 871, 1215, 1243, 1291
BstMAI GTCTC 2 cut(s) 812, 1066
BstMBI GATC 8 cut(s) 466, 538, 766, 858, 868, 1212, 1240, 1288
BstMWI GCNNNNNNNGC 4 cut(s) 511, 520, 529, 542
BstNI CCWGG 1 cut(s) 625
BstNSI RCATGY 2 cut(s) 646, 1331
BstSCI CCNGG 4 cut(s) 602, 623, 1207, 1208
BstSFI CTRYAG 1 cut(s) 1081
BstUI CGCG 3 cut(s) 38, 944, 1023
BstV1I GCAGC 2 cut(s) 535, 700
BstV2I GAAGAC 1 cut(s) 797
BstX2I RGATCY 2 cut(s) 858, 1212
BstYI RGATCY 2 cut(s) 858, 1212
BtsCI GGATG 6 cut(s) 21, 466, 469, 1093, 1138, 1159
BveI ACCTGC 1 cut(s) 824
Cac8I GCNNGC 2 cut(s) 534, 644
CfoI GCGC 1 cut(s) 505
Cfr10I RCCGGY 3 cut(s) 167, 794, 1167
Cfr13I GGNCC 2 cut(s) 627, 836
Cfr9I CCCGGG 1 cut(s) 1208
CseI GACGC 1 cut(s) 1012
Csp6I GTAC 2 cut(s) 715, 1415
CspAI ACCGGT 2 cut(s) 167, 794
CviAII CATG 6 cut(s) 218, 643, 667, 735, 967, 1328
CviQI GTAC 2 cut(s) 715, 1415
DdeI CTNAG 5 cut(s) 117, 276, 584, 634, 1347
DpnI GATC 8 cut(s) 468, 540, 768, 860, 870, 1214, 1242, 1290
DpnII GATC 8 cut(s) 466, 538, 766, 858, 868, 1212, 1240, 1288
Eam1104I CTCTTC 3 cut(s) 50, 384, 1019
EarI CTCTTC 3 cut(s) 50, 384, 1019
EciI GGCGGA 1 cut(s) 85
Ecl136II GAGCTC 2 cut(s) 43, 54
Eco130I CCWWGG 1 cut(s) 880
Eco24I GRGCYC 2 cut(s) 45, 56
Eco31I GGTCTC 1 cut(s) 812
Eco32I GATATC 1 cut(s) 112
Eco47I GGWCC 2 cut(s) 627, 836
Eco53kI GAGCTC 2 cut(s) 43, 54
Eco57I CTGAAG 2 cut(s) 919, 969
Eco88I CYCGRG 1 cut(s) 1208
EcoICRI GAGCTC 2 cut(s) 43, 54
EcoNI CCTNNNNNAGG 1 cut(s) 1074
EcoO109I RGGNCCY 2 cut(s) 627, 836
EcoRII CCWGG 1 cut(s) 623
EcoRV GATATC 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 880
EcoT38I GRGCYC 2 cut(s) 45, 56
ErhI CCWWGG 1 cut(s) 880
FaeI CATG 6 cut(s) 221, 646, 670, 738, 970, 1331
FatI CATG 6 cut(s) 217, 642, 666, 734, 966, 1327
FauI CCCGC 2 cut(s) 490, 965
Fnu4HI GCNGC 2 cut(s) 524, 689
FokI GGATG 6 cut(s) 28, 456, 473, 1100, 1125, 1146
FriOI GRGCYC 2 cut(s) 45, 56
Fsp4HI GCNGC 2 cut(s) 524, 689
FspI TGCGCA 1 cut(s) 504
GlaI GCGC 1 cut(s) 504
GluI GCNGC 2 cut(s) 524, 689
GsuI CTGGAG 1 cut(s) 893
HapII CCGG 6 cut(s) 105, 168, 603, 795, 1168, 1209
HgaI GACGC 1 cut(s) 1012
HhaI GCGC 1 cut(s) 505
Hin1II CATG 6 cut(s) 221, 646, 670, 738, 970, 1331
Hin6I GCGC 1 cut(s) 503
HinP1I GCGC 1 cut(s) 503
HinfI GANTC 5 cut(s) 963, 999, 1184, 1342, 1351
HpaII CCGG 6 cut(s) 105, 168, 603, 795, 1168, 1209
HphI GGTGA 1 cut(s) 1386
Hpy166II GTNNAC 2 cut(s) 410, 1261
Hpy188I TCNGA 9 cut(s) 120, 161, 585, 1032, 1143, 1164, 1189, 1293, 1350
Hpy188III TCNNGA 3 cut(s) 49, 305, 910
Hpy8I GTNNAC 2 cut(s) 410, 1261
Hpy99I CGWCG 1 cut(s) 1112
HpyAV CCTTC 3 cut(s) 545, 993, 1380
HpyCH4IV ACGT 3 cut(s) 122, 914, 1315
HpyCH4V TGCA 5 cut(s) 64, 523, 536, 688, 1320
HpyF10VI GCNNNNNNNGC 4 cut(s) 511, 520, 529, 542
HpyF3I CTNAG 5 cut(s) 117, 276, 584, 634, 1347
HpySE526I ACGT 3 cut(s) 122, 914, 1315
Hsp92II CATG 6 cut(s) 221, 646, 670, 738, 970, 1331
HspAI GCGC 1 cut(s) 503
Kzo9I GATC 8 cut(s) 466, 538, 766, 858, 868, 1212, 1240, 1288
LguI GCTCTTC 3 cut(s) 50, 384, 1019
LmnI GCTCC 3 cut(s) 40, 98, 1179
Lsp1109I GCAGC 2 cut(s) 535, 700
LweI GCATC 5 cut(s) 231, 336, 999, 1168, 1314
MaeII ACGT 3 cut(s) 122, 914, 1315
MaeIII GTNAC 1 cut(s) 589
MalI GATC 8 cut(s) 468, 540, 768, 860, 870, 1214, 1242, 1290
MboI GATC 8 cut(s) 466, 538, 766, 858, 868, 1212, 1240, 1288
MflI RGATCY 2 cut(s) 858, 1212
MhlI GDGCHC 2 cut(s) 45, 56
MluCI AATT 4 cut(s) 347, 574, 754, 1046
MlyI GAGTC 2 cut(s) 972, 1345
MmeI TCCRAC 3 cut(s) 55, 705, 1336
MseI TTAA 4 cut(s) 6, 141, 320, 897
MslI CAYNNNNRTG 1 cut(s) 971
MspA1I CMGCKG 2 cut(s) 497, 691
MspI CCGG 6 cut(s) 105, 168, 603, 795, 1168, 1209
MspR9I CCNGG 4 cut(s) 604, 625, 1209, 1210
Mva1269I GAATGC 2 cut(s) 490, 608
MvaI CCWGG 1 cut(s) 625
MvnI CGCG 3 cut(s) 38, 944, 1023
MwoI GCNNNNNNNGC 4 cut(s) 511, 520, 529, 542
NciI CCSGG 3 cut(s) 604, 1209, 1210
NdeII GATC 8 cut(s) 466, 538, 766, 858, 868, 1212, 1240, 1288
NlaIII CATG 6 cut(s) 221, 646, 670, 738, 970, 1331
NlaIV GGNNCC 1 cut(s) 316
NmuCI GTSAC 1 cut(s) 589
NsbI TGCGCA 1 cut(s) 504
NspI RCATGY 2 cut(s) 646, 1331
PaeI GCATGC 1 cut(s) 646
PciI ACATGT 1 cut(s) 1327
PciSI GCTCTTC 3 cut(s) 50, 384, 1019
PctI GAATGC 2 cut(s) 490, 608
PfeI GAWTC 3 cut(s) 999, 1184, 1342
PinAI ACCGGT 2 cut(s) 167, 794
PkrI GCNGC 2 cut(s) 525, 690
PleI GAGTC 2 cut(s) 971, 1345
PpsI GAGTC 2 cut(s) 971, 1345
PpuMI RGGWCCY 2 cut(s) 627, 836
PscI ACATGT 1 cut(s) 1327
PsiI TTATAA 2 cut(s) 1074, 1224
Psp124BI GAGCTC 2 cut(s) 45, 56
Psp1406I AACGTT 1 cut(s) 1315
Psp5II RGGWCCY 2 cut(s) 627, 836
Psp6I CCWGG 1 cut(s) 623
PspGI CCWGG 1 cut(s) 623
PspN4I GGNNCC 1 cut(s) 316
PspPI GGNCC 2 cut(s) 627, 836
PspPPI RGGWCCY 2 cut(s) 627, 836
PsuI RGATCY 2 cut(s) 858, 1212
PvuII CAGCTG 1 cut(s) 691
RsaI GTAC 2 cut(s) 716, 1416
RsaNI GTAC 2 cut(s) 715, 1415
RseI CAYNNNNRTG 1 cut(s) 971
SacI GAGCTC 2 cut(s) 45, 56
SapI GCTCTTC 3 cut(s) 50, 384, 1019
SaqAI TTAA 4 cut(s) 6, 141, 320, 897
SatI GCNGC 2 cut(s) 524, 689
Sau3AI GATC 8 cut(s) 466, 538, 766, 858, 868, 1212, 1240, 1288
Sau96I GGNCC 2 cut(s) 627, 836
SchI GAGTC 2 cut(s) 972, 1345
ScrFI CCNGG 4 cut(s) 604, 625, 1209, 1210
SduI GDGCHC 2 cut(s) 45, 56
SfaNI GCATC 5 cut(s) 231, 336, 999, 1168, 1314
SfcI CTRYAG 1 cut(s) 1081
SinI GGWCC 2 cut(s) 627, 836
SmaI CCCGGG 1 cut(s) 1210
SmiMI CAYNNNNRTG 1 cut(s) 971
SphI GCATGC 1 cut(s) 646
Sse9I AATT 4 cut(s) 347, 574, 754, 1046
SsiI CCGC 7 cut(s) 38, 96, 270, 497, 646, 958, 1021
SstI GAGCTC 2 cut(s) 45, 56
StyD4I CCNGG 4 cut(s) 602, 623, 1207, 1208
StyI CCWWGG 1 cut(s) 880
TaiI ACGT 3 cut(s) 125, 917, 1318
TaqI TCGA 1 cut(s) 765
TasI AATT 4 cut(s) 347, 574, 754, 1046
TatI WGTACW 1 cut(s) 1414
TfiI GAWTC 3 cut(s) 999, 1184, 1342
Tru1I TTAA 4 cut(s) 6, 141, 320, 897
Tru9I TTAA 4 cut(s) 6, 141, 320, 897
TseFI GTSAC 1 cut(s) 589
TseI GCWGC 2 cut(s) 523, 688
Tsp45I GTSAC 1 cut(s) 589
TspDTI ATGAA 7 cut(s) 206, 467, 683, 723, 1162, 1243, 1374
TspMI CCCGGG 1 cut(s) 1208
VpaK11BI GGWCC 2 cut(s) 627, 836
XagI CCTNNNNNAGG 1 cut(s) 1074
XapI RAATTY 1 cut(s) 1046
XceI RCATGY 2 cut(s) 646, 1331
XmaI CCCGGG 1 cut(s) 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.