Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003500

Physical Location & Seq

Genomic Coordinates Reverse (-)

51345094 .. 51350487

Gene Structure 5394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0340400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGGATCCAATGGCCGAGGAGCAAATAGATTATGAAGAGGAGGAGTATGGAGGTGCTCAGAAGCTCCAATATCAGGAAAGTGGAGCCATACCTGCTCTTGCAGATGAAGAACCGATGGTAGAAGATGACGAGTATGACGATCTCTACAATGATGTTAATGTTGGGGAAGGTTTCCTGCAGATGCACCGACCTGAGGCACCACACCCACCTGCTGGTGTTGGCAATGGAGGACTCCAAGCTCAGAAAAATAATGTTCCTGAAGTAAGAGTTCAAGCTGGTGTTTCTCAGGAACTGAAAAATCCGGGATTTTCAGTTGAAGGAAAGTATTCTAGTGTTCCTGAACAGAAGGATCAGCCCCCAGTGTCTAAGGTGCCAGAACTGGGATCTCAAAAGGGGAGGGTTATGGAGATGACACATGATGCTCAAGTCAGGAATATGGGTTTTCAGGGGACAGCAACTATGCCGTCCAATGTTGGTGTTGATTCTTCTTCAGATCTTACTGGGAAAATTGCCAATGGGCCTATTCCATCAATGAATTCTTGCAGTACTGGTCCTCCAGCTGTTCCACAGATGCCGGCTAATCAAATGAATATGAAGATAAATGTAAATCGTCCAATGGTTAATGAAAACCAAATTCGTCCCCCAATTGAGAATGGTTCAGCCACGCTGTTTGTGGGAGAACTCCATTGGTGGACTACTGATGCTGAGCTGGAAAGTGTTTTGTCTCAGTTTGGGAGGATCAAGGAAATTAAGTTCTTTGATGAGAGAGCCAGTGGTAAATCCAAAGGTTATTGTCAGGTAGATTTTTATGATCCAGTGGCTGCCAGTGCATGCAAAGAGGGAATGGATGGTTATGTTTTTAATGGGAGAGCTTGTGTTGTCGCCTTTGCTTCTTCACAAACTTTAAAGCAGATGGGAGATTCTTATGTCAGCAAATCCCAAGGCCAGGTTCAGACTCAGCCCCAAGGAAGAAGGCCTATGAATGATGGTGCTGGGAGAGGGGGAAATATGAATTATCAAGGTGGAGACACAGGGAGAAATTTTGGAAGGGGTAATAATTGGGGACGAGGTGGACAGGGAGTACTCAACAGAGGTCCTGGTGGTGGAGGACCAGGGAGGGGACGAGGAGGGGCCATGGGTGCAAGGAACATGGTTGGAAACAATGCTGGGGTTGGAACTGGTGCTAATGGAGGAGGCTATGGACAGGGCCTTGGAGGTCCTGGATTTGGCGGTCCTGTTGGAGGTATGATGAATGCACCGGGTATGATGGGTCCTGGGTTTGATCCAACATATATGGGTCGAGGAGGTGGTTACGGAGGGTTTCCTGGTCCTGGTTTTCCTGGAATGCTTCCTCAATTTCCTGGTGTTAATGCAATGGGACTTGCTGGGGTTGCTCCTCATGTAAACCCAGCTTTCTTTGGCAGGGGAATGGCAACGAATGGGATGGGGATGATGGGTTCTTCTGGAATGGAGGGGCATCATGCCCCGATGTGGAATGATCCCAGCATGGCTGGGTGGACTGGAGAAGAACAGGATCGAAGAACTAGGGAATCGAGCTATGGTGGTGATGATGGTGCATCTGAGTATGGAAACTATGGGGAGGCAACTCATGAGAAATCAGTTAGGTCAAGTGCTGCCCCTAGGGAAAGGGAACGGGAATCTGAGCGTGACTGGACGGGAACCTCTGAGAGGAGGCATCGTGATGAAAGGGAACAAGACTGGGATAGGTCTGAGAGGGAGCACAGGGAGCCCAGGTACAAGGAAGAAAAAGATAGTTACCGAGACCATAGGCGGAGGGAGCGTGACGTGGCCTATGAGGATGACCGGGACAGAGGACACTCTTCTTCAAGACCTCGCAGCAGGTCCAAGGCAATGCCAGAAGATGATCATCGTTCTCGATCAAGGGATGTGGATTATGGGAAGAGGAGACGATTGCCATCTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000346 GO:0000347 GO:0000445 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006396 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016441 GO:0016458 GO:0016604 GO:0016607 GO:0019222 GO:0031047 GO:0031050 GO:0031503 GO:0031974 GO:0031981 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048519 GO:0050657 GO:0050658 GO:0050789 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070727 GO:0070887 GO:0070918 GO:0071166 GO:0071310 GO:0071359 GO:0071407 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990428

KEGG Pathways

Metabolic & Signaling

ko03013 ko03040 map03013 map03040

Pfam Domains

Protein Families

THOC2_N Tho2 Thoc2

Protein Analysis

648

Amino Acids

70.18

Weight (kDa)

5.52

Isoelectric Point (pI)

48.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	223 - 292	2.8e-14	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003500)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10590 AT1G10590 AT1G10590 AT1G23750 AT1G23750
fragaria_vesca	FvH4_4g33300 FvH4_4g34480
malus_domestica	MD13G1092100.v1.1 MD16G1092700.v1.1
prunus_persica	Prupe.1G253600_v2.0.a1
pyrus_communis	pycom16g07910
rosa_chinensis	RchiOBHm_Chr4g0442331 RchiOBHm_Chr4g0443871
rosa_laevigata	RLG00000005882 RLG00000006017
rosa_multiflora	Rmu_sc0000124.1_g000051 Rmu_sc0010179.1_g000002 Rmu_sc0019062.1_g000005 Rmu_sc0042307.1_g000001 Rmu_sc0042318.1_g000001
rosa_roxburghii	Rroxscaffold_5G00383190 Rroxscaffold_5G00384430
rosa_rugosa	Rorug04G0340400 Rorug04G0340400 Rorug04G0340500 Rorug04G0347900.1
rosa_samantha	Rh4AG392100 Rh4AG408500 Rh4BG405600 Rh4BG419500 Rh4CG420700 Rh4CG433500 Rh4DG398800 Rh4DG414500
rosa_wichuraiana	Rw4G035070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	217
Acc36I	ACCTGC	3 cut(s)	100, 217, 1851
AccB1I	GGYRCC	2 cut(s)	196, 370
AccB7I	CCANNNNNTGG	1 cut(s)	212
AciI	CCGC	2 cut(s)	1230, 1792
AclWI	GGATC	8 cut(s)	12, 357, 391, 746, 806, 1277, 1493, 1542
AcoI	YGGCCR	1 cut(s)	12
AcsI	RAATTY	3 cut(s)	535, 633, 1039
AcuI	CTGAAG	2 cut(s)	279, 474
AfaI	GTAC	3 cut(s)	547, 1083, 1757
AgsI	TTSAA	3 cut(s)	272, 317, 1848
AjiI	CACGTC	1 cut(s)	1807
AjuI	GAANNNNNNNTTGG	2 cut(s)	933, 965
AloI	GAACNNNNNNTCC	4 cut(s)	737, 769, 1441, 1473
AluBI	AGCT	8 cut(s)	64, 239, 275, 560, 709, 872, 1412, 1557
AluI	AGCT	8 cut(s)	64, 239, 275, 560, 709, 872, 1412, 1557
Alw21I	GWGCWC	2 cut(s)	58, 1743
Alw26I	GTCTC	4 cut(s)	729, 1020, 1776, 1921
AlwI	GGATC	8 cut(s)	12, 357, 391, 746, 806, 1277, 1493, 1542
AlwNI	CAGNNNCTG	2 cut(s)	292, 821
AoxI	GGCC	7 cut(s)	12, 518, 943, 974, 1131, 1207, 1809
ApeKI	GCWGC	3 cut(s)	821, 1634, 1857
ApoI	RAATTY	3 cut(s)	535, 633, 1039
Asp700I	GAANNNNTTC	1 cut(s)	325
AspA2I	CCTAGG	1 cut(s)	1640
AsuC2I	CCSGG	3 cut(s)	303, 1260, 1826
AsuHPI	GGTGA	1 cut(s)	1577
AvaII	GGWCC	8 cut(s)	551, 1094, 1109, 1217, 1232, 1271, 1328, 1863
AvrII	CCTAGG	1 cut(s)	1640
AxyI	CCTNAGG	1 cut(s)	192
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	2 cut(s)	196, 370
BanII	GRGCYC	1 cut(s)	1752
Bbv12I	GWGCWC	2 cut(s)	58, 1743
BbvI	GCAGC	3 cut(s)	808, 1621, 1869
BceAI	ACGGC	1 cut(s)	448
BclI	TGATCA	1 cut(s)	1885
BcnI	CCSGG	3 cut(s)	303, 1260, 1826
BcoDI	GTCTC	4 cut(s)	729, 1020, 1776, 1921
BfaI	CTAG	3 cut(s)	330, 1545, 1641
BfmI	CTRYAG	1 cut(s)	176
BfuAI	ACCTGC	3 cut(s)	100, 217, 1851
BglII	AGATCT	1 cut(s)	493
BisI	GCNGC	3 cut(s)	822, 1635, 1858
BlnI	CCTAGG	1 cut(s)	1640
BlpI	GCTNAGC	1 cut(s)	705
BlsI	GCNGC	3 cut(s)	823, 1636, 1859
BmcAI	AGTACT	2 cut(s)	547, 1083
Bme18I	GGWCC	8 cut(s)	551, 1094, 1109, 1217, 1232, 1271, 1328, 1863
BmgBI	CACGTC	1 cut(s)	1807
BmiI	GGNNCC	8 cut(s)	6, 85, 198, 372, 1132, 1272, 1681, 1749
BmrI	ACTGGG	4 cut(s)	353, 389, 510, 1729
BmsI	GCATC	7 cut(s)	171, 409, 561, 691, 1486, 1586, 1705
BmuI	ACTGGG	4 cut(s)	353, 389, 510, 1729
BpmI	CTGGAG	2 cut(s)	540, 1542
Bpu1102I	GCTNAGC	1 cut(s)	705
BpuEI	CTTGAG	1 cut(s)	408
BpuMI	CCSGG	3 cut(s)	303, 1260, 1826
BsaBI	GATNNNNATC	2 cut(s)	1887, 1936
BsaI	GGTCTC	1 cut(s)	1776
Bse118I	RCCGGY	1 cut(s)	574
Bse21I	CCTNAGG	1 cut(s)	192
Bse3DI	GCAATG	3 cut(s)	229, 1380, 1878
Bse8I	GATNNNNATC	2 cut(s)	1887, 1936
BseGI	GGATG	5 cut(s)	853, 1449, 1455, 1825, 1912
BseJI	GATNNNNATC	2 cut(s)	1887, 1936
BseMI	GCAATG	3 cut(s)	229, 1380, 1878
BseRI	GAGGAG	9 cut(s)	32, 53, 56, 1140, 1206, 1317, 1386, 1705, 1939
BseXI	GCAGC	3 cut(s)	808, 1621, 1869
BseYI	CCCAGC	6 cut(s)	992, 1166, 1385, 1408, 1502, 1511
BshFI	GGCC	7 cut(s)	14, 520, 945, 976, 1133, 1209, 1811
BshNI	GGYRCC	2 cut(s)	196, 370
BsiHKAI	GWGCWC	2 cut(s)	58, 1743
BsiSI	CCGG	4 cut(s)	302, 575, 1259, 1825
BslFI	GGGAC	6 cut(s)	463, 624, 1077, 1134, 1392, 1841
BsmAI	GTCTC	4 cut(s)	729, 1020, 1776, 1921
BsmBI	CGTCTC	1 cut(s)	1921
BsmFI	GGGAC	6 cut(s)	463, 624, 1077, 1134, 1392, 1841
BsmI	GAATGC	2 cut(s)	1258, 1350
BsnI	GGCC	7 cut(s)	14, 520, 945, 976, 1133, 1209, 1811
Bso31I	GGTCTC	1 cut(s)	1776
Bsp1286I	GDGCHC	3 cut(s)	58, 1743, 1752
Bsp1720I	GCTNAGC	1 cut(s)	705
Bsp19I	CCATGG	1 cut(s)	1134
BspACI	CCGC	2 cut(s)	1230, 1792
BspANI	GGCC	7 cut(s)	14, 520, 945, 976, 1133, 1209, 1811
BspHI	TCATGA	1 cut(s)	1609
BspLI	GGNNCC	8 cut(s)	6, 85, 198, 372, 1132, 1272, 1681, 1749
BspMAI	CTGCAG	1 cut(s)	180
BspMI	ACCTGC	3 cut(s)	100, 217, 1851
BspPI	GGATC	8 cut(s)	12, 357, 391, 746, 806, 1277, 1493, 1542
BspT107I	GGYRCC	2 cut(s)	196, 370
BspTNI	GGTCTC	1 cut(s)	1776
BsrDI	GCAATG	3 cut(s)	229, 1380, 1878
BsrFI	RCCGGY	1 cut(s)	574
BssAI	RCCGGY	1 cut(s)	574
BssT1I	CCWWGG	6 cut(s)	940, 964, 1134, 1210, 1640, 1866
Bst6I	CTCTTC	3 cut(s)	30, 1846, 1916
BstC8I	GCNNGC	2 cut(s)	576, 832
BstDSI	CCRYGG	1 cut(s)	1134
BstENI	CCTNNNNNAGG	2 cut(s)	1239, 1687
BstF5I	GGATG	5 cut(s)	853, 1449, 1455, 1825, 1912
BstMAI	GTCTC	4 cut(s)	729, 1020, 1776, 1921
BstMWI	GCNNNNNNNGC	6 cut(s)	92, 827, 1139, 1391, 1747, 1798
BstNSI	RCATGY	1 cut(s)	834
BstSFI	CTRYAG	1 cut(s)	176
BstV1I	GCAGC	3 cut(s)	808, 1621, 1869
BstX2I	RGATCY	3 cut(s)	4, 383, 493
BstYI	RGATCY	3 cut(s)	4, 383, 493
Bsu36I	CCTNAGG	1 cut(s)	192
BsuRI	GGCC	7 cut(s)	14, 520, 945, 976, 1133, 1209, 1811
BtgI	CCRYGG	1 cut(s)	1134
BtrI	CACGTC	1 cut(s)	1807
BtsCI	GGATG	5 cut(s)	853, 1449, 1455, 1825, 1912
BtsIMutI	CAGTG	4 cut(s)	366, 778, 822, 832
BveI	ACCTGC	3 cut(s)	100, 217, 1851
Cac8I	GCNNGC	2 cut(s)	576, 832
CaiI	CAGNNNCTG	2 cut(s)	292, 821
CciI	TCATGA	1 cut(s)	1609
Cfr10I	RCCGGY	1 cut(s)	574
Csp6I	GTAC	3 cut(s)	546, 1082, 1756
CspCI	CAANNNNNGTGG	4 cut(s)	652, 687, 1890, 1925
CviAII	CATG	8 cut(s)	416, 831, 1135, 1150, 1400, 1481, 1507, 1610
CviQI	GTAC	3 cut(s)	546, 1082, 1756
DraI	TTTAAA	1 cut(s)	906
EaeI	YGGCCR	1 cut(s)	12
Eam1104I	CTCTTC	3 cut(s)	30, 1846, 1916
EarI	CTCTTC	3 cut(s)	30, 1846, 1916
EciI	GGCGGA	1 cut(s)	1807
Eco130I	CCWWGG	6 cut(s)	940, 964, 1134, 1210, 1640, 1866
Eco147I	AGGCCT	1 cut(s)	976
Eco24I	GRGCYC	1 cut(s)	1752
Eco31I	GGTCTC	1 cut(s)	1776
Eco47I	GGWCC	8 cut(s)	551, 1094, 1109, 1217, 1232, 1271, 1328, 1863
Eco57I	CTGAAG	2 cut(s)	279, 474
Eco81I	CCTNAGG	1 cut(s)	192
EcoNI	CCTNNNNNAGG	2 cut(s)	1239, 1687
EcoO109I	RGGNCCY	4 cut(s)	1094, 1207, 1217, 1271
EcoRI	GAATTC	1 cut(s)	535
EcoT14I	CCWWGG	6 cut(s)	940, 964, 1134, 1210, 1640, 1866
EcoT38I	GRGCYC	1 cut(s)	1752
ErhI	CCWWGG	6 cut(s)	940, 964, 1134, 1210, 1640, 1866
Esp3I	CGTCTC	1 cut(s)	1921
FaeI	CATG	8 cut(s)	419, 834, 1138, 1153, 1403, 1484, 1510, 1613
FaqI	GGGAC	6 cut(s)	463, 624, 1077, 1134, 1392, 1841
FatI	CATG	8 cut(s)	415, 830, 1134, 1149, 1399, 1480, 1506, 1609
FbaI	TGATCA	1 cut(s)	1885
Fnu4HI	GCNGC	3 cut(s)	822, 1635, 1858
FokI	GGATG	5 cut(s)	860, 1456, 1462, 1832, 1919
FriOI	GRGCYC	1 cut(s)	1752
Fsp4HI	GCNGC	3 cut(s)	822, 1635, 1858
FspBI	CTAG	3 cut(s)	330, 1545, 1641
GluI	GCNGC	3 cut(s)	822, 1635, 1858
GsaI	CCCAGC	6 cut(s)	996, 1170, 1389, 1412, 1506, 1515
GsuI	CTGGAG	2 cut(s)	540, 1542
HaeIII	GGCC	7 cut(s)	14, 520, 945, 976, 1133, 1209, 1811
HapII	CCGG	4 cut(s)	302, 575, 1259, 1825
Hin1II	CATG	8 cut(s)	419, 834, 1138, 1153, 1403, 1484, 1510, 1613
HinfI	GANTC	6 cut(s)	231, 482, 920, 955, 1550, 1658
HpaII	CCGG	4 cut(s)	302, 575, 1259, 1825
HphI	GGTGA	1 cut(s)	1577
Hpy166II	GTNNAC	4 cut(s)	693, 1073, 1405, 1518
Hpy188I	TCNGA	9 cut(s)	60, 243, 493, 954, 1582, 1663, 1687, 1732, 1942
Hpy8I	GTNNAC	4 cut(s)	693, 1073, 1405, 1518
HpyAV	CCTTC	5 cut(s)	161, 311, 340, 966, 1041
HpyCH4IV	ACGT	1 cut(s)	1806
HpyF10VI	GCNNNNNNNGC	6 cut(s)	92, 827, 1139, 1391, 1747, 1798
HpySE526I	ACGT	1 cut(s)	1806
Hsp92II	CATG	8 cut(s)	419, 834, 1138, 1153, 1403, 1484, 1510, 1613
KroI	GCCGGC	1 cut(s)	574
KroNI	GCCGGC	1 cut(s)	576
Ksp22I	TGATCA	1 cut(s)	1885
LmnI	GCTCC	7 cut(s)	19, 69, 83, 1399, 1738, 1747, 1798
Lsp1109I	GCAGC	3 cut(s)	808, 1621, 1869
LweI	GCATC	7 cut(s)	171, 409, 561, 691, 1486, 1586, 1705
MaeI	CTAG	3 cut(s)	330, 1545, 1641
MaeII	ACGT	1 cut(s)	1806
MaeIII	GTNAC	4 cut(s)	1310, 1667, 1775, 1802
MfeI	CAATTG	1 cut(s)	645
MflI	RGATCY	3 cut(s)	4, 383, 493
MhlI	GDGCHC	3 cut(s)	58, 1743, 1752
MluCI	AATT	9 cut(s)	507, 535, 633, 645, 747, 1012, 1039, 1057, 1355
MlyI	GAGTC	2 cut(s)	225, 949
MmeI	TCCRAC	4 cut(s)	1135, 1153, 1219, 1310
MroNI	GCCGGC	1 cut(s)	574
MroXI	GAANNNNTTC	1 cut(s)	325
MseI	TTAA	6 cut(s)	156, 621, 750, 861, 905, 1368
MslI	CAYNNNNRTG	2 cut(s)	1701, 1942
MspA1I	CMGCKG	1 cut(s)	560
MspI	CCGG	4 cut(s)	302, 575, 1259, 1825
MunI	CAATTG	1 cut(s)	645
Mva1269I	GAATGC	2 cut(s)	1258, 1350
MwoI	GCNNNNNNNGC	6 cut(s)	92, 827, 1139, 1391, 1747, 1798
NaeI	GCCGGC	1 cut(s)	576
NciI	CCSGG	3 cut(s)	303, 1260, 1826
NcoI	CCATGG	1 cut(s)	1134
NgoMIV	GCCGGC	1 cut(s)	574
NlaIII	CATG	8 cut(s)	419, 834, 1138, 1153, 1403, 1484, 1510, 1613
NlaIV	GGNNCC	8 cut(s)	6, 85, 198, 372, 1132, 1272, 1681, 1749
NmeAIII	GCCGAG	1 cut(s)	40
NmuCI	GTSAC	2 cut(s)	1667, 1802
NspI	RCATGY	1 cut(s)	834
PaeI	GCATGC	1 cut(s)	834
PagI	TCATGA	1 cut(s)	1609
PaqCI	CACCTGC	1 cut(s)	217
PceI	AGGCCT	1 cut(s)	976
PcsI	WCGNNNNNNNCGW	1 cut(s)	135
PctI	GAATGC	2 cut(s)	1258, 1350
PdiI	GCCGGC	1 cut(s)	576
PdmI	GAANNNNTTC	1 cut(s)	325
PfeI	GAWTC	4 cut(s)	482, 920, 1550, 1658
PflMI	CCANNNNNTGG	1 cut(s)	212
PfoI	TCCNGGA	3 cut(s)	301, 1219, 1339
PkrI	GCNGC	3 cut(s)	823, 1636, 1859
PleI	GAGTC	2 cut(s)	225, 949
PpsI	GAGTC	2 cut(s)	225, 949
PpuMI	RGGWCCY	3 cut(s)	1094, 1217, 1271
Psp5II	RGGWCCY	3 cut(s)	1094, 1217, 1271
PspFI	CCCAGC	6 cut(s)	992, 1166, 1385, 1408, 1502, 1511
PspN4I	GGNNCC	8 cut(s)	6, 85, 198, 372, 1132, 1272, 1681, 1749
PspPPI	RGGWCCY	3 cut(s)	1094, 1217, 1271
PstI	CTGCAG	1 cut(s)	180
PstNI	CAGNNNCTG	2 cut(s)	292, 821
PsuI	RGATCY	3 cut(s)	4, 383, 493
PvuII	CAGCTG	1 cut(s)	560
RsaI	GTAC	3 cut(s)	547, 1083, 1757
RsaNI	GTAC	3 cut(s)	546, 1082, 1756
RseI	CAYNNNNRTG	2 cut(s)	1701, 1942
SaqAI	TTAA	6 cut(s)	156, 621, 750, 861, 905, 1368
SatI	GCNGC	3 cut(s)	822, 1635, 1858
ScaI	AGTACT	2 cut(s)	547, 1083
SchI	GAGTC	2 cut(s)	225, 949
SduI	GDGCHC	3 cut(s)	58, 1743, 1752
SfaNI	GCATC	7 cut(s)	171, 409, 561, 691, 1486, 1586, 1705
SfcI	CTRYAG	1 cut(s)	176
SinI	GGWCC	8 cut(s)	551, 1094, 1109, 1217, 1232, 1271, 1328, 1863
SmiMI	CAYNNNNRTG	2 cut(s)	1701, 1942
SmlI	CTYRAG	1 cut(s)	423
SmoI	CTYRAG	1 cut(s)	423
SphI	GCATGC	1 cut(s)	834
Sse9I	AATT	9 cut(s)	507, 535, 633, 645, 747, 1012, 1039, 1057, 1355
SseBI	AGGCCT	1 cut(s)	976
SsiI	CCGC	2 cut(s)	1230, 1792
SspMI	CTAG	3 cut(s)	330, 1545, 1641
StuI	AGGCCT	1 cut(s)	976
StyI	CCWWGG	6 cut(s)	940, 964, 1134, 1210, 1640, 1866
TaiI	ACGT	1 cut(s)	1809
TaqI	TCGA	4 cut(s)	1300, 1537, 1553, 1897
TasI	AATT	9 cut(s)	507, 535, 633, 645, 747, 1012, 1039, 1057, 1355
TatI	WGTACW	2 cut(s)	545, 1081
TfiI	GAWTC	4 cut(s)	482, 920, 1550, 1658
Tru1I	TTAA	6 cut(s)	156, 621, 750, 861, 905, 1368
Tru9I	TTAA	6 cut(s)	156, 621, 750, 861, 905, 1368
TscAI	CASTG	4 cut(s)	366, 778, 822, 832
TseFI	GTSAC	2 cut(s)	1667, 1802
TseI	GCWGC	3 cut(s)	821, 1634, 1857
Tsp45I	GTSAC	2 cut(s)	1667, 1802
TspGWI	ACGGA	1 cut(s)	1329
TspRI	CASTG	4 cut(s)	366, 778, 822, 832
Van91I	CCANNNNNTGG	1 cut(s)	212
VpaK11BI	GGWCC	8 cut(s)	551, 1094, 1109, 1217, 1232, 1271, 1328, 1863
XagI	CCTNNNNNAGG	2 cut(s)	1239, 1687
XapI	RAATTY	3 cut(s)	535, 633, 1039
XceI	RCATGY	1 cut(s)	834
XcmI	CCANNNNNNNNNTGG	1 cut(s)	670
XmaJI	CCTAGG	1 cut(s)	1640
XmnI	GAANNNNTTC	1 cut(s)	325
XspI	CTAG	3 cut(s)	330, 1545, 1641
ZrmI	AGTACT	2 cut(s)	547, 1083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.