Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004391

Physical Location & Seq

Genomic Coordinates Reverse (-)

54538852 .. 54544842

Gene Structure 5991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0374900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGGCATTTTCTCCAACTCCCATCTCTGCAACTGCACTTTCTTCCACCAACCCAACACTGCTGCCCAAAAGGCCTTCTTCACCTTTTACCACTGCAAATCCAATAGGCATACCCAAAGACCTCTACTTTAACCATGATGGTTCTGCCACAAAGAAGCTTCTGGCAGGGGTGAGCATGGTGGCAGAGCTGGTTGGGGTTACACTGGGTCCAAAGGGAAGGAATGTGGTGCTGCAGAATAAGTATGGACCTCCCAAGATTGTCAATGATGGTGAAACTGTTCTCAAAGAGATCGAGTTGGAGGACTCTGTGGAGAATGTCGGAGTTAAACTGTTAAGGCAAGCTGGAGCAAAAACAAATGACCTGGCCGGAGATGGTTCCACTACAGCTGTAATTCTTGCTCATGGTTTAATTACTGAAGGTGTGAAGGTTACTGCCGCTGGCATGAATCCCATTCAAATTGCTCGTGGGATTGAGAAGACTGCAGTGGCCCTAGTTTCTGAACTCAAATTGATGTCCAGAGAGATTGAGGATCATGAACTTGCAGATGTTGCTGCAGTTAGTGCAGGCAATGATTATACAGTGGGGAACATGATTTACAATGCTCTTTGTCAAGTAGGAAAGAAGGGTGTAATTACTATTGAAAAAGGGAAGTCTACGGAAAACACTCTTCAAATTGTAGAAGGAATGCAGTTTGATCGTGGATACTTATCTCCTTACTTTGTCACTGATCGACAAAAAATGATAGTGGAGTTTCAAGAGTGTAAGTTGCTTTTGGTTGACAAAAAAATTACATACCCGGAGGAGCTGTTTAAGATATTGGACAATGCAGTGAAACAGAAGTATCCAATTGTGATAGTTGCCGAGGGGATTGAGAAGGAAGCTTTAACTCCAGTAATAAGAAACAAGCTCAGAGGTGCACTGAAAGCAGTTGCCATTAAGGCGCCTGCCTTCGGTGAACGCAAAAGCCACTACTTAGACGACATTGCCATTTTGACCGGAGCAACAGTAGTAAGAGAAGAGATGGGAATGATTTTACATAAGACTGGCCCGGAGGTATTGGGGACTGCTACTAAGGTTGTGATAACAAAGGACTCTACACTGATAGTTACTGATGGAAGCACTCGAGAAGCTGTTGACAAGAGGGTTTCTCAGATACAAAGGCTTGTTGAGAACACTAAAGAAGAATTTCAAAAGAAGATATTAAATGAAAGAATAGGAAGATTATCAGGGGGGATTGCTATTCTGCAGGTAGGAGCACAAACGCAAGTTGAGTTGAAGGATAAACAACTCAGAATTGAAGATGCTTTGAATGCAACCAAGGCAGCAATTGAGGAAGGTGTTGTAGTTGGTGGTGGCTGCTGCCTTTTGAGGCTCTCTAAAAAGGTGGATGCCATCAAAGAACTTTTGGATAATGAAGAACAGAAGATTGGAGCGGAAATATTCAAGAAAGCTCTAAGCTATCCTGCAAAACTAATAGCTAAAAATGCAGGTGTAAATGGCAGTGTTGTAGTAGAGAAGGTTCTATCAAATGCTGATATGGGGTACGGATATAATGCTGCAAGAGACTGTTATGAGGACCTAATGAAAGCTGGGATTATGGATCCATCAAAGGTTGTTAGATGTTGTTTGGAGCATGCTGCATCAGTCGCAAAAACTTTTCTGTTGTCTGATGCTGTTGTCGTCGAGATTAAGGAATTGAATACCATCCCAAGAAGAAGGCCAAAACCACCCCTTCCCCCCATGCCCCAAATGCCACAGATGCCACAAATGCCGCCAATGTCACCCATGCCACCAATGTCCATGCCAACCTCAGGTGGTCGATCATTTGGTTCCAAGTATGGCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004418 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006778 GO:0006779 GO:0006783 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009451 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009941 GO:0009987 GO:0015994 GO:0015995 GO:0016070 GO:0016740 GO:0016765 GO:0018130 GO:0019438 GO:0031967 GO:0031975 GO:0033013 GO:0033014 GO:0034641 GO:0042168 GO:0042440 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046148 GO:0046483 GO:0048046 GO:0050896 GO:0051186 GO:0051188 GO:0051704 GO:0051707 GO:0071704 GO:0090304 GO:0098542 GO:1900865 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko01100 ko01110 ko01120 map00860 map01100 map01110 map01120

Pfam Domains

Protein Families

Porphobil_deam Porphobil_deamC

Protein Analysis

615

Amino Acids

66.47

Weight (kDa)

8.82

Isoelectric Point (pI)

39.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	60 - 562	8.1e-84	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004391)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08280
fragaria_vesca	FvH4_4g37020 FvH4_7g04700
malus_domestica	MD13G1004100.v1.1 MD16G1003400.v1.1
prunus_persica	Prupe.1G348400_v2.0.a1 Prupe.1G348400_v2.0.a1 Prupe.1G348400_v2.0.a1
pyrus_communis	pycom13g00340 pycom16g00240
rosa_chinensis	RchiOBHm_Chr1g0330101 RchiOBHm_Chr4g0446801
rosa_laevigata	RLG00000005629 RLG00000029832
rosa_multiflora	Rmu_co8512413.1_g000001 Rmu_sc0001753.1_g000022 Rmu_sc0004673.1_g000003
rosa_roxburghii	Rroxscaffold_4G00320380 Rroxscaffold_5G00387180
rosa_rugosa	Rorug01G0085800 Rorug01G0085900 Rorug04G0374900
rosa_samantha	Rh1AG104400 Rh1CG100000 Rh1DG107300 Rh1DG108400 Rh4AG436200 Rh4BG445300 Rh4CG462600 Rh4DG444000
rosa_wichuraiana	Rw0G015900 Rw4G037310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1478
Acc36I	ACCTGC	2 cut(s)	1237, 1478
AccB1I	GGYRCC	1 cut(s)	940
AccBSI	CCGCTC	1 cut(s)	1433
AccI	GTMKAC	1 cut(s)	653
AciI	CCGC	3 cut(s)	435, 1433, 1772
AclWI	GGATC	3 cut(s)	537, 1595, 1608
AcoI	YGGCCR	1 cut(s)	363
AcsI	RAATTY	1 cut(s)	1184
AcuI	CTGAAG	1 cut(s)	435
AcyI	GRCGYC	1 cut(s)	941
AfaI	GTAC	1 cut(s)	1544
AfiI	CCNNNNNNNGG	2 cut(s)	950, 1811
AjnI	CCWGG	1 cut(s)	360
AjuI	GAANNNNNNNTTGG	2 cut(s)	1410, 1442
Alw21I	GWGCWC	2 cut(s)	919, 1258
Alw26I	GTCTC	1 cut(s)	1557
Alw44I	GTGCAC	1 cut(s)	915
AlwI	GGATC	3 cut(s)	537, 1595, 1608
Ama87I	CYCGRG	1 cut(s)	1122
AoxI	GGCC	5 cut(s)	71, 363, 486, 1045, 1718
ApaLI	GTGCAC	1 cut(s)	915
ApeKI	GCWGC	8 cut(s)	61, 229, 551, 1322, 1356, 1359, 1556, 1637
ApoI	RAATTY	1 cut(s)	1184
Asp700I	GAANNNNTTC	2 cut(s)	276, 1185
AspLEI	GCGC	1 cut(s)	943
AspS9I	GGNCC	5 cut(s)	206, 245, 487, 1046, 1576
AsuC2I	CCSGG	2 cut(s)	797, 1049
AsuHPI	GGTGA	5 cut(s)	72, 181, 281, 965, 1773
AvaI	CYCGRG	1 cut(s)	1122
AvaII	GGWCC	3 cut(s)	206, 245, 1576
AxyI	CCTNAGG	1 cut(s)	1810
BaeGI	GKGCMC	1 cut(s)	919
BaeI	ACNNNNGTAYC	2 cut(s)	824, 857
BamHI	GGATCC	1 cut(s)	1600
BanI	GGYRCC	1 cut(s)	940
BauI	CACGAG	1 cut(s)	462
BbsI	GAAGAC	1 cut(s)	482
Bbv12I	GWGCWC	2 cut(s)	919, 1258
BbvI	GCAGC	8 cut(s)	48, 216, 538, 1334, 1343, 1346, 1543, 1624
BccI	CCATC	9 cut(s)	29, 131, 260, 365, 1015, 1106, 1400, 1612, 1712
BcgI	CGANNNNNNTGC	2 cut(s)	677, 711
BciT130I	CCWGG	1 cut(s)	362
BciVI	GTATCC	2 cut(s)	695, 852
BcnI	CCSGG	2 cut(s)	797, 1049
BcoDI	GTCTC	1 cut(s)	1557
BfaI	CTAG	1 cut(s)	491
BfmI	CTRYAG	5 cut(s)	230, 381, 480, 552, 1244
BfoI	RGCGCY	1 cut(s)	944
BfuAI	ACCTGC	2 cut(s)	1237, 1478
BfuI	GTATCC	2 cut(s)	695, 852
BglI	GCCNNNNNGGC	2 cut(s)	70, 938
Bme1390I	CCNGG	3 cut(s)	362, 797, 1049
Bme18I	GGWCC	3 cut(s)	206, 245, 1576
BmeT110I	CYCGRG	1 cut(s)	1122
BmgT120I	GGNCC	5 cut(s)	206, 245, 487, 1046, 1576
BmiI	GGNNCC	5 cut(s)	207, 376, 942, 1602, 1831
BmrFI	CCNGG	3 cut(s)	362, 797, 1049
BmrI	ACTGGG	1 cut(s)	212
BmsI	GCATC	5 cut(s)	1291, 1378, 1649, 1660, 1749
BmuI	ACTGGG	1 cut(s)	212
BpiI	GAAGAC	1 cut(s)	482
BplI	GAGNNNNNCTC	2 cut(s)	1132, 1164
BpmI	CTGGAG	2 cut(s)	363, 873
BpuMI	CCSGG	2 cut(s)	797, 1049
BsaBI	GATNNNNATC	1 cut(s)	706
BsaHI	GRCGYC	1 cut(s)	941
BsaJI	CCNNGG	2 cut(s)	861, 1317
BsaWI	WCCGGW	1 cut(s)	995
BsaXI	ACNNNNNCTCC	4 cut(s)	791, 821, 990, 1020
Bsc4I	CCNNNNNNNGG	2 cut(s)	950, 1811
Bse1I	ACTGG	3 cut(s)	207, 890, 1048
Bse21I	CCTNAGG	1 cut(s)	1810
Bse3DI	GCAATG	2 cut(s)	574, 981
Bse8I	GATNNNNATC	1 cut(s)	706
BseBI	CCWGG	1 cut(s)	362
BseDI	CCNNGG	2 cut(s)	861, 1317
BseGI	GGATG	2 cut(s)	1393, 1704
BseJI	GATNNNNATC	1 cut(s)	706
BseLI	CCNNNNNNNGG	2 cut(s)	950, 1811
BseMI	GCAATG	2 cut(s)	574, 981
BseMII	CTCAG	4 cut(s)	922, 1163, 1303, 1824
BseNI	ACTGG	3 cut(s)	207, 890, 1048
BseRI	GAGGAG	1 cut(s)	815
BseSI	GKGCMC	1 cut(s)	919
BseXI	GCAGC	8 cut(s)	48, 216, 538, 1334, 1343, 1346, 1543, 1624
BseYI	CCCAGC	1 cut(s)	1589
BsgI	GTGCAG	2 cut(s)	18, 582
BshFI	GGCC	5 cut(s)	73, 365, 488, 1047, 1720
BshNI	GGYRCC	1 cut(s)	940
BsiHKAI	GWGCWC	2 cut(s)	919, 1258
BsiHKCI	CYCGRG	1 cut(s)	1122
BsiSI	CCGG	4 cut(s)	366, 797, 996, 1049
BslFI	GGGAC	1 cut(s)	1075
BslI	CCNNNNNNNGG	2 cut(s)	950, 1811
BsmAI	GTCTC	1 cut(s)	1557
BsmFI	GGGAC	1 cut(s)	1075
BsmI	GAATGC	2 cut(s)	690, 1315
BsnI	GGCC	5 cut(s)	73, 365, 488, 1047, 1720
BsoBI	CYCGRG	1 cut(s)	1122
Bsp1286I	GDGCHC	2 cut(s)	919, 1258
Bsp143I	GATC	6 cut(s)	288, 529, 694, 727, 1600, 1820
BspACI	CCGC	3 cut(s)	435, 1433, 1772
BspANI	GGCC	5 cut(s)	73, 365, 488, 1047, 1720
BspCNI	CTCAG	4 cut(s)	921, 1162, 1302, 1823
BspHI	TCATGA	1 cut(s)	532
BspLI	GGNNCC	5 cut(s)	207, 376, 942, 1602, 1831
BspMAI	CTGCAG	4 cut(s)	234, 484, 556, 1248
BspMI	ACCTGC	2 cut(s)	1237, 1478
BspPI	GGATC	3 cut(s)	537, 1595, 1608
BspT107I	GGYRCC	1 cut(s)	940
BsrBI	CCGCTC	1 cut(s)	1433
BsrDI	GCAATG	2 cut(s)	574, 981
BsrI	ACTGG	3 cut(s)	207, 890, 1048
BssECI	CCNNGG	2 cut(s)	861, 1317
BssMI	GATC	6 cut(s)	288, 529, 694, 727, 1600, 1820
BssNI	GRCGYC	1 cut(s)	941
BssSI	CACGAG	1 cut(s)	462
BssT1I	CCWWGG	1 cut(s)	1317
Bst2BI	CACGAG	1 cut(s)	462
Bst2UI	CCWGG	1 cut(s)	362
Bst4CI	ACNGT	5 cut(s)	277, 330, 580, 1006, 1568
Bst6I	CTCTTC	2 cut(s)	672, 1011
BstACI	GRCGYC	1 cut(s)	941
BstAPI	GCANNNNNTGC	2 cut(s)	548, 560
BstC8I	GCNNGC	5 cut(s)	339, 439, 565, 945, 1635
BstDEI	CTNAG	7 cut(s)	908, 973, 1071, 1149, 1289, 1454, 1810
BstF5I	GGATG	2 cut(s)	1393, 1704
BstH2I	RGCGCY	1 cut(s)	944
BstHHI	GCGC	1 cut(s)	943
BstKTI	GATC	6 cut(s)	291, 532, 697, 730, 1603, 1823
BstMAI	GTCTC	1 cut(s)	1557
BstMBI	GATC	6 cut(s)	288, 529, 694, 727, 1600, 1820
BstNI	CCWGG	1 cut(s)	362
BstNSI	RCATGY	1 cut(s)	1637
BstSCI	CCNGG	3 cut(s)	360, 795, 1047
BstSFI	CTRYAG	5 cut(s)	230, 381, 480, 552, 1244
BstSLI	GKGCMC	1 cut(s)	919
BstV1I	GCAGC	8 cut(s)	48, 216, 538, 1334, 1343, 1346, 1543, 1624
BstV2I	GAAGAC	1 cut(s)	482
BstX2I	RGATCY	1 cut(s)	1600
BstYI	RGATCY	1 cut(s)	1600
Bsu36I	CCTNAGG	1 cut(s)	1810
BsuI	GTATCC	2 cut(s)	695, 852
BsuRI	GGCC	5 cut(s)	73, 365, 488, 1047, 1720
BtsCI	GGATG	2 cut(s)	1393, 1704
BtsI	GCAGTG	5 cut(s)	56, 90, 489, 834, 1507
BveI	ACCTGC	2 cut(s)	1237, 1478
Cac8I	GCNNGC	5 cut(s)	339, 439, 565, 945, 1635
CciI	TCATGA	1 cut(s)	532
CfoI	GCGC	1 cut(s)	943
Cfr13I	GGNCC	5 cut(s)	206, 245, 487, 1046, 1576
Csp6I	GTAC	1 cut(s)	1543
CviQI	GTAC	1 cut(s)	1543
DdeI	CTNAG	7 cut(s)	908, 973, 1071, 1149, 1289, 1454, 1810
DinI	GGCGCC	1 cut(s)	942
DpnI	GATC	6 cut(s)	290, 531, 696, 729, 1602, 1822
DpnII	GATC	6 cut(s)	288, 529, 694, 727, 1600, 1820
EaeI	YGGCCR	1 cut(s)	363
Eam1104I	CTCTTC	2 cut(s)	672, 1011
EarI	CTCTTC	2 cut(s)	672, 1011
Eco130I	CCWWGG	1 cut(s)	1317
Eco147I	AGGCCT	1 cut(s)	73
Eco47I	GGWCC	3 cut(s)	206, 245, 1576
Eco57I	CTGAAG	1 cut(s)	435
Eco81I	CCTNAGG	1 cut(s)	1810
Eco88I	CYCGRG	1 cut(s)	1122
EcoO109I	RGGNCCY	1 cut(s)	1576
EcoRII	CCWGG	1 cut(s)	360
EcoT14I	CCWWGG	1 cut(s)	1317
EgeI	GGCGCC	1 cut(s)	942
EheI	GGCGCC	1 cut(s)	942
ErhI	CCWWGG	1 cut(s)	1317
FalI	AAGNNNNNCTT	2 cut(s)	61, 93
FaqI	GGGAC	1 cut(s)	1075
FblI	GTMKAC	1 cut(s)	653
FokI	GGATG	2 cut(s)	1400, 1691
FspBI	CTAG	1 cut(s)	491
GlaI	GCGC	1 cut(s)	942
GsaI	CCCAGC	1 cut(s)	1593
GsuI	CTGGAG	2 cut(s)	363, 873
HaeII	RGCGCY	1 cut(s)	944
HaeIII	GGCC	5 cut(s)	73, 365, 488, 1047, 1720
HapII	CCGG	4 cut(s)	366, 797, 996, 1049
HhaI	GCGC	1 cut(s)	943
Hin1I	GRCGYC	1 cut(s)	941
Hin6I	GCGC	1 cut(s)	941
HinP1I	GCGC	1 cut(s)	941
HincII	GTYRAC	2 cut(s)	778, 1135
HindII	GTYRAC	2 cut(s)	778, 1135
HindIII	AAGCTT	2 cut(s)	155, 879
HinfI	GANTC	3 cut(s)	302, 445, 1091
HpaII	CCGG	4 cut(s)	366, 797, 996, 1049
HphI	GGTGA	5 cut(s)	72, 181, 281, 965, 1773
Hpy166II	GTNNAC	5 cut(s)	654, 778, 917, 956, 1135
Hpy188I	TCNGA	6 cut(s)	320, 499, 911, 1152, 1292, 1669
Hpy188III	TCNNGA	6 cut(s)	516, 533, 755, 1124, 1444, 1684
Hpy8I	GTNNAC	5 cut(s)	654, 778, 917, 956, 1135
Hpy99I	CGWCG	1 cut(s)	1685
HpyCH4III	ACNGT	5 cut(s)	277, 330, 580, 1006, 1568
HpyF3I	CTNAG	7 cut(s)	908, 973, 1071, 1149, 1289, 1454, 1810
Hsp92I	GRCGYC	1 cut(s)	941
HspAI	GCGC	1 cut(s)	941
KasI	GGCGCC	1 cut(s)	940
Kzo9I	GATC	6 cut(s)	288, 529, 694, 727, 1600, 1820
LmnI	GCTCC	6 cut(s)	344, 802, 998, 1253, 1430, 1630
Lsp1109I	GCAGC	8 cut(s)	48, 216, 538, 1334, 1343, 1346, 1543, 1624
LweI	GCATC	5 cut(s)	1291, 1378, 1649, 1660, 1749
MaeI	CTAG	1 cut(s)	491
MaeIII	GTNAC	5 cut(s)	196, 427, 721, 1105, 1779
MalI	GATC	6 cut(s)	290, 531, 696, 729, 1602, 1822
MbiI	CCGCTC	1 cut(s)	1433
MboI	GATC	6 cut(s)	288, 529, 694, 727, 1600, 1820
MfeI	CAATTG	2 cut(s)	846, 1326
MflI	RGATCY	1 cut(s)	1600
MhlI	GDGCHC	2 cut(s)	919, 1258
Mly113I	GGCGCC	1 cut(s)	941
MlyI	GAGTC	2 cut(s)	296, 1085
MmeI	TCCRAC	3 cut(s)	38, 276, 298
MroXI	GAANNNNTTC	2 cut(s)	276, 1185
MseI	TTAA	9 cut(s)	129, 324, 332, 407, 810, 884, 936, 1202, 1689
MspA1I	CMGCKG	2 cut(s)	386, 437
MspI	CCGG	4 cut(s)	366, 797, 996, 1049
MspR9I	CCNGG	3 cut(s)	362, 797, 1049
MunI	CAATTG	2 cut(s)	846, 1326
Mva1269I	GAATGC	2 cut(s)	690, 1315
MvaI	CCWGG	1 cut(s)	362
NarI	GGCGCC	1 cut(s)	941
NciI	CCSGG	2 cut(s)	797, 1049
NdeII	GATC	6 cut(s)	288, 529, 694, 727, 1600, 1820
NlaIV	GGNNCC	5 cut(s)	207, 376, 942, 1602, 1831
NmeAIII	GCCGAG	1 cut(s)	886
NmuCI	GTSAC	2 cut(s)	721, 1779
NspI	RCATGY	1 cut(s)	1637
PaeI	GCATGC	1 cut(s)	1637
PaeR7I	CTCGAG	1 cut(s)	1122
PagI	TCATGA	1 cut(s)	532
PaqCI	CACCTGC	1 cut(s)	1478
PceI	AGGCCT	1 cut(s)	73
PctI	GAATGC	2 cut(s)	690, 1315
PdmI	GAANNNNTTC	2 cut(s)	276, 1185
PfeI	GAWTC	1 cut(s)	445
PleI	GAGTC	2 cut(s)	296, 1085
PluTI	GGCGCC	1 cut(s)	944
PpsI	GAGTC	2 cut(s)	296, 1085
PpuMI	RGGWCCY	1 cut(s)	1576
Psp5II	RGGWCCY	1 cut(s)	1576
Psp6I	CCWGG	1 cut(s)	360
PspFI	CCCAGC	1 cut(s)	1589
PspGI	CCWGG	1 cut(s)	360
PspN4I	GGNNCC	5 cut(s)	207, 376, 942, 1602, 1831
PspPI	GGNCC	5 cut(s)	206, 245, 487, 1046, 1576
PspPPI	RGGWCCY	1 cut(s)	1576
PsrI	GAACNNNNNNTAC	4 cut(s)	578, 610, 1503, 1535
PstI	CTGCAG	4 cut(s)	234, 484, 556, 1248
PsuI	RGATCY	1 cut(s)	1600
PvuII	CAGCTG	1 cut(s)	386
RsaI	GTAC	1 cut(s)	1544
RsaNI	GTAC	1 cut(s)	1543
SaqAI	TTAA	9 cut(s)	129, 324, 332, 407, 810, 884, 936, 1202, 1689
Sau3AI	GATC	6 cut(s)	288, 529, 694, 727, 1600, 1820
Sau96I	GGNCC	5 cut(s)	206, 245, 487, 1046, 1576
SchI	GAGTC	2 cut(s)	296, 1085
ScrFI	CCNGG	3 cut(s)	362, 797, 1049
SduI	GDGCHC	2 cut(s)	919, 1258
SfaNI	GCATC	5 cut(s)	1291, 1378, 1649, 1660, 1749
SfcI	CTRYAG	5 cut(s)	230, 381, 480, 552, 1244
SfoI	GGCGCC	1 cut(s)	942
Sfr274I	CTCGAG	1 cut(s)	1122
SinI	GGWCC	3 cut(s)	206, 245, 1576
SlaI	CTCGAG	1 cut(s)	1122
SmlI	CTYRAG	1 cut(s)	1122
SmoI	CTYRAG	1 cut(s)	1122
SphI	GCATGC	1 cut(s)	1637
SseBI	AGGCCT	1 cut(s)	73
SsiI	CCGC	3 cut(s)	435, 1433, 1772
SspDI	GGCGCC	1 cut(s)	940
SspI	AATATT	1 cut(s)	1440
SspMI	CTAG	1 cut(s)	491
StuI	AGGCCT	1 cut(s)	73
StyD4I	CCNGG	3 cut(s)	360, 795, 1047
StyI	CCWWGG	1 cut(s)	1317
TaaI	ACNGT	5 cut(s)	277, 330, 580, 1006, 1568
TaqI	TCGA	5 cut(s)	291, 730, 1123, 1683, 1819
TauI	GCSGC	2 cut(s)	437, 1774
TfiI	GAWTC	1 cut(s)	445
Tru1I	TTAA	9 cut(s)	129, 324, 332, 407, 810, 884, 936, 1202, 1689
Tru9I	TTAA	9 cut(s)	129, 324, 332, 407, 810, 884, 936, 1202, 1689
TseFI	GTSAC	2 cut(s)	721, 1779
TseI	GCWGC	8 cut(s)	61, 229, 551, 1322, 1356, 1359, 1556, 1637
Tsp45I	GTSAC	2 cut(s)	721, 1779
TspDTI	ATGAA	5 cut(s)	458, 549, 1221, 1428, 1598
TspGWI	ACGGA	2 cut(s)	671, 1560
VneI	GTGCAC	1 cut(s)	915
VpaK11BI	GGWCC	3 cut(s)	206, 245, 1576
XapI	RAATTY	1 cut(s)	1184
XceI	RCATGY	1 cut(s)	1637
XhoI	CTCGAG	1 cut(s)	1122
XmiI	GTMKAC	1 cut(s)	653
XmnI	GAANNNNTTC	2 cut(s)	276, 1185
XspI	CTAG	1 cut(s)	491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.