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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20490 |
| fragaria_vesca | FvH4_3g22630 FvH4_3g22630 FvH4_3g22630 |
| malus_domestica | MD03G1201600.v1.1 |
| prunus_persica | Prupe.4G212300_v2.0.a1 Prupe.4G212300_v2.0.a1 Prupe.4G212300_v2.0.a1 |
| pyrus_communis | pycom03g15290 pycom03g15310 |
| rosa_chinensis | RchiOBHm_Chr5g0039401 |
| rosa_laevigata | RLG00000033911 |
| rosa_multiflora | Rmu_sc0004395.1_g000010 Rmu_sc0004395.1_g000013 Rmu_sc0007310.1_g000002 Rmu_sc0007310.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00040530 Rroxscaffold_1G00041820 |
| rosa_rugosa | Rorug05G0178800 Rorug05G0178900 Rorug05G0179000 |
| rosa_samantha | Rh5AG265400 Rh5BG269800 Rh5CG302900 Rh5DG277700 Rh5DG278000 |
| rosa_wichuraiana | Rw5G024860 Rw5G024880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 24, 1005 |
| AccI | GTMKAC | 1 cut(s) | 1717 |
| AccII | CGCG | 3 cut(s) | 361, 404, 1593 |
| AclWI | GGATC | 4 cut(s) | 1412, 1652, 1665, 1695 |
| AcsI | RAATTY | 3 cut(s) | 443, 791, 1497 |
| AdeI | CACNNNGTG | 1 cut(s) | 1670 |
| AfaI | GTAC | 9 cut(s) | 68, 224, 611, 744, 777, 1184, 1307, 1542, 1855 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1667 |
| AflIII | ACRYGT | 3 cut(s) | 430, 1470, 1591 |
| AgsI | TTSAA | 9 cut(s) | 124, 492, 510, 577, 884, 1224, 1339, 1547, 1654 |
| AluBI | AGCT | 8 cut(s) | 483, 806, 927, 976, 1037, 1135, 1232, 1575 |
| AluI | AGCT | 8 cut(s) | 483, 806, 927, 976, 1037, 1135, 1232, 1575 |
| Alw21I | GWGCWC | 2 cut(s) | 117, 1234 |
| Alw26I | GTCTC | 2 cut(s) | 1090, 1479 |
| AlwI | GGATC | 4 cut(s) | 1412, 1652, 1665, 1695 |
| Ama87I | CYCGRG | 1 cut(s) | 80 |
| AoxI | GGCC | 2 cut(s) | 84, 1748 |
| ApeKI | GCWGC | 2 cut(s) | 415, 564 |
| ApoI | RAATTY | 3 cut(s) | 443, 791, 1497 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1581, 1613 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1501, 1867 |
| AspLEI | GCGC | 2 cut(s) | 361, 404 |
| AspS9I | GGNCC | 3 cut(s) | 84, 103, 995 |
| AsuC2I | CCSGG | 3 cut(s) | 81, 82, 108 |
| AsuHPI | GGTGA | 6 cut(s) | 122, 293, 449, 1030, 1402, 1682 |
| AsuII | TTCGAA | 1 cut(s) | 242 |
| AvaI | CYCGRG | 1 cut(s) | 80 |
| AvaII | GGWCC | 2 cut(s) | 103, 995 |
| BamHI | GGATCC | 1 cut(s) | 1657 |
| BanII | GRGCYC | 1 cut(s) | 1234 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 206, 238 |
| BauI | CACGAG | 1 cut(s) | 1570 |
| BbsI | GAAGAC | 1 cut(s) | 261 |
| Bbv12I | GWGCWC | 2 cut(s) | 117, 1234 |
| BbvI | GCAGC | 2 cut(s) | 427, 551 |
| BccI | CCATC | 5 cut(s) | 386, 402, 708, 884, 892 |
| BceAI | ACGGC | 1 cut(s) | 394 |
| BclI | TGATCA | 1 cut(s) | 283 |
| BcnI | CCSGG | 3 cut(s) | 81, 82, 108 |
| BcoDI | GTCTC | 2 cut(s) | 1090, 1479 |
| BfaI | CTAG | 3 cut(s) | 1241, 1344, 1667 |
| BfmI | CTRYAG | 1 cut(s) | 1825 |
| BisI | GCNGC | 2 cut(s) | 416, 565 |
| BlpI | GCTNAGC | 1 cut(s) | 1131 |
| BlsI | GCNGC | 2 cut(s) | 417, 566 |
| BmcAI | AGTACT | 2 cut(s) | 611, 1307 |
| Bme1390I | CCNGG | 3 cut(s) | 81, 82, 108 |
| Bme18I | GGWCC | 2 cut(s) | 103, 995 |
| BmeT110I | CYCGRG | 1 cut(s) | 80 |
| BmgT120I | GGNCC | 3 cut(s) | 84, 103, 995 |
| BmiI | GGNNCC | 6 cut(s) | 85, 104, 105, 463, 1659, 1741 |
| BmrFI | CCNGG | 3 cut(s) | 81, 82, 108 |
| BmsI | GCATC | 5 cut(s) | 283, 305, 593, 941, 1691 |
| BpiI | GAAGAC | 1 cut(s) | 261 |
| BpmI | CTGGAG | 2 cut(s) | 634, 1461 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1131 |
| Bpu14I | TTCGAA | 1 cut(s) | 242 |
| BpuEI | CTTGAG | 2 cut(s) | 1266, 1294 |
| BpuMI | CCSGG | 3 cut(s) | 81, 82, 108 |
| Bsa29I | ATCGAT | 1 cut(s) | 1883 |
| BsaJI | CCNNGG | 5 cut(s) | 80, 81, 106, 318, 568 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 145, 175, 1524, 1554 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1667 |
| Bse3DI | GCAATG | 1 cut(s) | 178 |
| BseCI | ATCGAT | 1 cut(s) | 1883 |
| BseDI | CCNNGG | 5 cut(s) | 80, 81, 106, 318, 568 |
| BseGI | GGATG | 2 cut(s) | 608, 1173 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1667 |
| BseMI | GCAATG | 1 cut(s) | 178 |
| BseMII | CTCAG | 4 cut(s) | 798, 954, 1085, 1145 |
| BseRI | GAGGAG | 1 cut(s) | 1745 |
| BseXI | GCAGC | 2 cut(s) | 427, 551 |
| BsgI | GTGCAG | 1 cut(s) | 1659 |
| Bsh1236I | CGCG | 3 cut(s) | 361, 404, 1593 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1747 |
| BshFI | GGCC | 2 cut(s) | 86, 1750 |
| BshVI | ATCGAT | 1 cut(s) | 1883 |
| BsiEI | CGRYCG | 1 cut(s) | 1747 |
| BsiHKAI | GWGCWC | 2 cut(s) | 117, 1234 |
| BsiHKCI | CYCGRG | 1 cut(s) | 80 |
| BsiSI | CCGG | 2 cut(s) | 81, 108 |
| BslFI | GGGAC | 3 cut(s) | 116, 1038, 1471 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1667 |
| BsmAI | GTCTC | 2 cut(s) | 1090, 1479 |
| BsmFI | GGGAC | 3 cut(s) | 116, 1038, 1471 |
| BsmI | GAATGC | 5 cut(s) | 1149, 1320, 1649, 1704, 1820 |
| BsnI | GGCC | 2 cut(s) | 86, 1750 |
| BsoBI | CYCGRG | 1 cut(s) | 80 |
| Bsp119I | TTCGAA | 1 cut(s) | 242 |
| Bsp1286I | GDGCHC | 2 cut(s) | 117, 1234 |
| Bsp1407I | TGTACA | 1 cut(s) | 66 |
| Bsp143I | GATC | 7 cut(s) | 126, 283, 642, 1404, 1657, 1687, 1744 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1131 |
| Bsp19I | CCATGG | 1 cut(s) | 318 |
| BspANI | GGCC | 2 cut(s) | 86, 1750 |
| BspCNI | CTCAG | 4 cut(s) | 799, 955, 1086, 1144 |
| BspDI | ATCGAT | 1 cut(s) | 1883 |
| BspFNI | CGCG | 3 cut(s) | 361, 404, 1593 |
| BspHI | TCATGA | 1 cut(s) | 1681 |
| BspLI | GGNNCC | 6 cut(s) | 85, 104, 105, 463, 1659, 1741 |
| BspPI | GGATC | 4 cut(s) | 1412, 1652, 1665, 1695 |
| BspT104I | TTCGAA | 1 cut(s) | 242 |
| BsrDI | GCAATG | 1 cut(s) | 178 |
| BsrGI | TGTACA | 1 cut(s) | 66 |
| BssECI | CCNNGG | 5 cut(s) | 80, 81, 106, 318, 568 |
| BssMI | GATC | 7 cut(s) | 126, 283, 642, 1404, 1657, 1687, 1744 |
| BssSI | CACGAG | 1 cut(s) | 1570 |
| BssT1I | CCWWGG | 2 cut(s) | 318, 568 |
| Bst2BI | CACGAG | 1 cut(s) | 1570 |
| Bst4CI | ACNGT | 7 cut(s) | 71, 374, 389, 656, 1075, 1606, 1858 |
| Bst6I | CTCTTC | 2 cut(s) | 633, 1037 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 768 |
| BstAUI | TGTACA | 1 cut(s) | 66 |
| BstBI | TTCGAA | 1 cut(s) | 242 |
| BstC8I | GCNNGC | 2 cut(s) | 363, 1818 |
| BstDEI | CTNAG | 6 cut(s) | 807, 963, 1094, 1131, 1437, 1443 |
| BstDSI | CCRYGG | 1 cut(s) | 318 |
| BstF5I | GGATG | 2 cut(s) | 608, 1173 |
| BstFNI | CGCG | 3 cut(s) | 361, 404, 1593 |
| BstHHI | GCGC | 2 cut(s) | 361, 404 |
| BstKTI | GATC | 7 cut(s) | 129, 286, 645, 1407, 1660, 1690, 1747 |
| BstMAI | GTCTC | 2 cut(s) | 1090, 1479 |
| BstMBI | GATC | 7 cut(s) | 126, 283, 642, 1404, 1657, 1687, 1744 |
| BstMCI | CGRYCG | 1 cut(s) | 1747 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 768, 1297, 1646 |
| BstNSI | RCATGY | 5 cut(s) | 434, 954, 1189, 1474, 1795 |
| BstSCI | CCNGG | 3 cut(s) | 79, 80, 106 |
| BstSFI | CTRYAG | 1 cut(s) | 1825 |
| BstUI | CGCG | 3 cut(s) | 361, 404, 1593 |
| BstV1I | GCAGC | 2 cut(s) | 427, 551 |
| BstV2I | GAAGAC | 1 cut(s) | 261 |
| BstX2I | RGATCY | 2 cut(s) | 1404, 1657 |
| BstYI | RGATCY | 2 cut(s) | 1404, 1657 |
| Bsu15I | ATCGAT | 1 cut(s) | 1883 |
| BsuRI | GGCC | 2 cut(s) | 86, 1750 |
| BsuTUI | ATCGAT | 1 cut(s) | 1883 |
| BtgI | CCRYGG | 1 cut(s) | 318 |
| BtsCI | GGATG | 2 cut(s) | 608, 1173 |
| BtsIMutI | CAGTG | 5 cut(s) | 76, 394, 645, 723, 1080 |
| Cac8I | GCNNGC | 2 cut(s) | 363, 1818 |
| CciI | TCATGA | 1 cut(s) | 1681 |
| CfoI | GCGC | 2 cut(s) | 361, 404 |
| Cfr13I | GGNCC | 3 cut(s) | 84, 103, 995 |
| Cfr9I | CCCGGG | 1 cut(s) | 80 |
| ClaI | ATCGAT | 1 cut(s) | 1883 |
| Csp6I | GTAC | 9 cut(s) | 67, 223, 610, 743, 776, 1183, 1306, 1541, 1854 |
| CviQI | GTAC | 9 cut(s) | 67, 223, 610, 743, 776, 1183, 1306, 1541, 1854 |
| DdeI | CTNAG | 6 cut(s) | 807, 963, 1094, 1131, 1437, 1443 |
| DpnI | GATC | 7 cut(s) | 128, 285, 644, 1406, 1659, 1689, 1746 |
| DpnII | GATC | 7 cut(s) | 126, 283, 642, 1404, 1657, 1687, 1744 |
| DraI | TTTAAA | 1 cut(s) | 1084 |
| DraIII | CACNNNGTG | 1 cut(s) | 1670 |
| Eam1104I | CTCTTC | 2 cut(s) | 633, 1037 |
| EarI | CTCTTC | 2 cut(s) | 633, 1037 |
| Ecl136II | GAGCTC | 1 cut(s) | 1232 |
| Eco130I | CCWWGG | 2 cut(s) | 318, 568 |
| Eco24I | GRGCYC | 1 cut(s) | 1234 |
| Eco47I | GGWCC | 2 cut(s) | 103, 995 |
| Eco53kI | GAGCTC | 1 cut(s) | 1232 |
| Eco88I | CYCGRG | 1 cut(s) | 80 |
| EcoICRI | GAGCTC | 1 cut(s) | 1232 |
| EcoO109I | RGGNCCY | 2 cut(s) | 84, 103 |
| EcoT14I | CCWWGG | 2 cut(s) | 318, 568 |
| EcoT22I | ATGCAT | 3 cut(s) | 298, 934, 1706 |
| EcoT38I | GRGCYC | 1 cut(s) | 1234 |
| ErhI | CCWWGG | 2 cut(s) | 318, 568 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1275, 1307 |
| FaqI | GGGAC | 3 cut(s) | 116, 1038, 1471 |
| FauNDI | CATATG | 1 cut(s) | 1462 |
| FbaI | TGATCA | 1 cut(s) | 283 |
| FblI | GTMKAC | 1 cut(s) | 1717 |
| Fnu4HI | GCNGC | 2 cut(s) | 416, 565 |
| FokI | GGATG | 2 cut(s) | 615, 1180 |
| FriOI | GRGCYC | 1 cut(s) | 1234 |
| Fsp4HI | GCNGC | 2 cut(s) | 416, 565 |
| FspBI | CTAG | 3 cut(s) | 1241, 1344, 1667 |
| GlaI | GCGC | 2 cut(s) | 360, 403 |
| GluI | GCNGC | 2 cut(s) | 416, 565 |
| GsuI | CTGGAG | 2 cut(s) | 634, 1461 |
| HaeIII | GGCC | 2 cut(s) | 86, 1750 |
| HapII | CCGG | 2 cut(s) | 81, 108 |
| HhaI | GCGC | 2 cut(s) | 361, 404 |
| Hin6I | GCGC | 2 cut(s) | 359, 402 |
| HinP1I | GCGC | 2 cut(s) | 359, 402 |
| HincII | GTYRAC | 1 cut(s) | 1779 |
| HindII | GTYRAC | 1 cut(s) | 1779 |
| HpaI | GTTAAC | 1 cut(s) | 1779 |
| HpaII | CCGG | 2 cut(s) | 81, 108 |
| HphI | GGTGA | 6 cut(s) | 122, 293, 449, 1030, 1402, 1682 |
| Hpy166II | GTNNAC | 5 cut(s) | 57, 659, 874, 1718, 1779 |
| Hpy188III | TCNNGA | 7 cut(s) | 95, 470, 1062, 1241, 1311, 1478, 1682 |
| Hpy8I | GTNNAC | 5 cut(s) | 57, 659, 874, 1718, 1779 |
| HpyAV | CCTTC | 4 cut(s) | 97, 136, 1265, 1628 |
| HpyCH4III | ACNGT | 7 cut(s) | 71, 374, 389, 656, 1075, 1606, 1858 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 768, 1297, 1646 |
| HpyF3I | CTNAG | 6 cut(s) | 807, 963, 1094, 1131, 1437, 1443 |
| HspAI | GCGC | 2 cut(s) | 359, 402 |
| KflI | GGGWCCC | 1 cut(s) | 103 |
| Ksp22I | TGATCA | 1 cut(s) | 283 |
| KspAI | GTTAAC | 1 cut(s) | 1779 |
| Kzo9I | GATC | 7 cut(s) | 126, 283, 642, 1404, 1657, 1687, 1744 |
| LmnI | GCTCC | 2 cut(s) | 412, 1739 |
| Lsp1109I | GCAGC | 2 cut(s) | 427, 551 |
| LweI | GCATC | 5 cut(s) | 283, 305, 593, 941, 1691 |
| MaeI | CTAG | 3 cut(s) | 1241, 1344, 1667 |
| MaeIII | GTNAC | 7 cut(s) | 32, 42, 374, 1018, 1346, 1466, 1794 |
| MalI | GATC | 7 cut(s) | 128, 285, 644, 1406, 1659, 1689, 1746 |
| MboI | GATC | 7 cut(s) | 126, 283, 642, 1404, 1657, 1687, 1744 |
| MboII | GAAGA | 7 cut(s) | 136, 189, 266, 650, 798, 1054, 1399 |
| MfeI | CAATTG | 1 cut(s) | 1691 |
| MflI | RGATCY | 2 cut(s) | 1404, 1657 |
| MhlI | GDGCHC | 2 cut(s) | 117, 1234 |
| MluI | ACGCGT | 1 cut(s) | 1591 |
| MlyI | GAGTC | 3 cut(s) | 511, 1092, 1246 |
| MmeI | TCCRAC | 5 cut(s) | 131, 530, 1138, 1685, 1840 |
| Mph1103I | ATGCAT | 3 cut(s) | 298, 934, 1706 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1501, 1867 |
| MseI | TTAA | 7 cut(s) | 588, 797, 914, 938, 1083, 1172, 1778 |
| MslI | CAYNNNNRTG | 4 cut(s) | 301, 435, 1158, 1772 |
| MspA1I | CMGCKG | 1 cut(s) | 806 |
| MspI | CCGG | 2 cut(s) | 81, 108 |
| MspR9I | CCNGG | 3 cut(s) | 81, 82, 108 |
| MunI | CAATTG | 1 cut(s) | 1691 |
| Mva1269I | GAATGC | 5 cut(s) | 1149, 1320, 1649, 1704, 1820 |
| MvnI | CGCG | 3 cut(s) | 361, 404, 1593 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 768, 1297, 1646 |
| NciI | CCSGG | 3 cut(s) | 81, 82, 108 |
| NcoI | CCATGG | 1 cut(s) | 318 |
| NdeI | CATATG | 1 cut(s) | 1462 |
| NdeII | GATC | 7 cut(s) | 126, 283, 642, 1404, 1657, 1687, 1744 |
| NlaIV | GGNNCC | 6 cut(s) | 85, 104, 105, 463, 1659, 1741 |
| NmuCI | GTSAC | 4 cut(s) | 32, 42, 1018, 1794 |
| NsiI | ATGCAT | 3 cut(s) | 298, 934, 1706 |
| NspI | RCATGY | 5 cut(s) | 434, 954, 1189, 1474, 1795 |
| NspV | TTCGAA | 1 cut(s) | 242 |
| PagI | TCATGA | 1 cut(s) | 1681 |
| PciI | ACATGT | 2 cut(s) | 430, 1470 |
| PctI | GAATGC | 5 cut(s) | 1149, 1320, 1649, 1704, 1820 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1501, 1867 |
| PkrI | GCNGC | 2 cut(s) | 417, 566 |
| Ple19I | CGATCG | 1 cut(s) | 1747 |
| PleI | GAGTC | 3 cut(s) | 511, 1092, 1246 |
| PpsI | GAGTC | 3 cut(s) | 511, 1092, 1246 |
| PpuMI | RGGWCCY | 1 cut(s) | 103 |
| PscI | ACATGT | 2 cut(s) | 430, 1470 |
| PsiI | TTATAA | 2 cut(s) | 24, 1005 |
| Psp124BI | GAGCTC | 1 cut(s) | 1234 |
| Psp5II | RGGWCCY | 1 cut(s) | 103 |
| PspN4I | GGNNCC | 6 cut(s) | 85, 104, 105, 463, 1659, 1741 |
| PspPI | GGNCC | 3 cut(s) | 84, 103, 995 |
| PspPPI | RGGWCCY | 1 cut(s) | 103 |
| PsuI | RGATCY | 2 cut(s) | 1404, 1657 |
| PvuI | CGATCG | 1 cut(s) | 1747 |
| PvuII | CAGCTG | 1 cut(s) | 806 |
| RsaI | GTAC | 9 cut(s) | 68, 224, 611, 744, 777, 1184, 1307, 1542, 1855 |
| RsaNI | GTAC | 9 cut(s) | 67, 223, 610, 743, 776, 1183, 1306, 1541, 1854 |
| RseI | CAYNNNNRTG | 4 cut(s) | 301, 435, 1158, 1772 |
| SacI | GAGCTC | 1 cut(s) | 1234 |
| SaqAI | TTAA | 7 cut(s) | 588, 797, 914, 938, 1083, 1172, 1778 |
| SatI | GCNGC | 2 cut(s) | 416, 565 |
| Sau3AI | GATC | 7 cut(s) | 126, 283, 642, 1404, 1657, 1687, 1744 |
| Sau96I | GGNCC | 3 cut(s) | 84, 103, 995 |
| ScaI | AGTACT | 2 cut(s) | 611, 1307 |
| SchI | GAGTC | 3 cut(s) | 511, 1092, 1246 |
| ScrFI | CCNGG | 3 cut(s) | 81, 82, 108 |
| SduI | GDGCHC | 2 cut(s) | 117, 1234 |
| SfaNI | GCATC | 5 cut(s) | 283, 305, 593, 941, 1691 |
| SfcI | CTRYAG | 1 cut(s) | 1825 |
| SfuI | TTCGAA | 1 cut(s) | 242 |
| SinI | GGWCC | 2 cut(s) | 103, 995 |
| SmaI | CCCGGG | 1 cut(s) | 82 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 301, 435, 1158, 1772 |
| SmlI | CTYRAG | 2 cut(s) | 1281, 1309 |
| SmoI | CTYRAG | 2 cut(s) | 1281, 1309 |
| SspMI | CTAG | 3 cut(s) | 1241, 1344, 1667 |
| SstI | GAGCTC | 1 cut(s) | 1234 |
| StyD4I | CCNGG | 3 cut(s) | 79, 80, 106 |
| StyI | CCWWGG | 2 cut(s) | 318, 568 |
| TaaI | ACNGT | 7 cut(s) | 71, 374, 389, 656, 1075, 1606, 1858 |
| TaqI | TCGA | 8 cut(s) | 96, 242, 339, 469, 636, 683, 1269, 1883 |
| TatI | WGTACW | 6 cut(s) | 66, 609, 742, 775, 1182, 1305 |
| Tru1I | TTAA | 7 cut(s) | 588, 797, 914, 938, 1083, 1172, 1778 |
| Tru9I | TTAA | 7 cut(s) | 588, 797, 914, 938, 1083, 1172, 1778 |
| TscAI | CASTG | 5 cut(s) | 76, 394, 652, 730, 1080 |
| TseFI | GTSAC | 4 cut(s) | 32, 42, 1018, 1794 |
| TseI | GCWGC | 2 cut(s) | 415, 564 |
| Tsp45I | GTSAC | 4 cut(s) | 32, 42, 1018, 1794 |
| TspGWI | ACGGA | 2 cut(s) | 891, 1495 |
| TspMI | CCCGGG | 1 cut(s) | 80 |
| TspRI | CASTG | 5 cut(s) | 76, 394, 652, 730, 1080 |
| VpaK11BI | GGWCC | 2 cut(s) | 103, 995 |
| XapI | RAATTY | 3 cut(s) | 443, 791, 1497 |
| XbaI | TCTAGA | 1 cut(s) | 1240 |
| XceI | RCATGY | 5 cut(s) | 434, 954, 1189, 1474, 1795 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 614 |
| XmaI | CCCGGG | 1 cut(s) | 80 |
| XmiI | GTMKAC | 1 cut(s) | 1717 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1501, 1867 |
| XspI | CTAG | 3 cut(s) | 1241, 1344, 1667 |
| ZrmI | AGTACT | 2 cut(s) | 611, 1307 |
| Zsp2I | ATGCAT | 3 cut(s) | 298, 934, 1706 |