Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003392

Physical Location & Seq

Genomic Coordinates Forward (+)

17030519 .. 17034067

Gene Structure 3549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0179000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGGCTAGAAGTCTCACCTTGATTTTCATTCTCATCACCCTGTTGGACTCCGGCACCTTTAACCTTATTCAGAGAGTGAAGTCCGATGATGATTCGGCTCCTCCAGGAACATTTCTGCCAGGCAAGAAGCTAGGTGTGAACCATAGAACCGGCAACATCTGGTCACTTTCATCATCACCAAGTCCTTTGGGTGCTTTCACACTTTCTTGGGAGCACAAACGACGCCAATTGCATATTAGCCTAGGTGAGGTGGTTTATTGGAGTAGTGGAGTCTTTAAAGATGGGAGGTTCGAATATATATCATCACCCAGGTACAATTTCACCATCGTTTCAAATAAAATAGAAGACTCCATCACCTACAGCACCGTGGATCATACTGATAAAGTGTCAGCATGGCTGCTGAAGGACACGGGGGATCTGTATGATACTTATACAGGAGATGACATTGCGCGAGCAGACTGCGATGGCTATAGCACCGAGAAAGGGTGCCTTAGAAGACTCCGGCCAAGTAGTTGCATGGCGACATTTGGGGTTGAGTTTCAGCTGAGAAAAGCTCGCTGTCATTCAACTAGTGAAAGAACCCCATATTATTTTAGGAATGTAAGTAATGGCGCTAGTGAGTGCAAGGCTGCTTGTTGGCAAGATTGTGAATGCCGTGGCTTTGACATTGCGATTAATCAAACCGCTGGATGCCGGTTTTGGAGTGCAGACTGTCAATTTGATAAAGTCAGTGGATTCAGTTCTGGATCTAGTTTCGGTTCTGGATCTAGTTTTGTGCTGTCAAGATTAATCCCTTTACAACCATCGTCTCCCAGAAGTATTAAACAAGATCCAGCACGTAGGTTGATCTGGATTGGCACTGCTGTTGTCTCTGCTCTACTGGTAATGGTGAGTTTGTTCGCCTGCTATCTACTAATAAGAAGAATAGGAAGGAAATTAGTACATTCAGGCCGAAATGGAGCAAAGGTTCAGGAAATTCTTACCTTGATGAAACCTAATATACCTACTCATGAAAATGATGGAAAGATAGGAAATGATATAAGCGTTTTTAGCTACACATCTGTTATGGCTGCTACACGCAACTTCTCAGACGAAAACAAGCTCGGTGAAGGGGGGTTTGGATCTGTTTATCAGGGAAAATTGGTGACGGGACAAGAAATAGCCGTAAAGAAGCTTTCCAAAAATTCAGAGCAAGGCGCTCTAGAGTTTAAGAATGAATTGATACTCGTATATGAACTCCAGCATACTAACCTTGTTCAACTTTTTGGATTTTGCATTCGTGGTGAAGAGAGGATGTTGATATATGAGTACATGCCAAACAAAAGTCTGGACTACTTTTTGTTTGATTCAACCAGAGGTGTGCTACTCGATTGGAAAAGGCGTTTCAACATAATTGAAGGAGTCGCTCAAGGATTGCTTTACTTGCACAAATACTCCAGAATGAGAGTGATTCATAGAGATTTGAAGGCCAGTAATATTCTACTTGATGAAAGCATGAATCCAAGAATTTCTGATTTTGGTATGGCAAGGACTTTTACACAAAATGAACTGGAAGCAACTACTAAGAGGATTGTCGGGACATATGGTTACATGTCACCTGAGTATGTCTTTGAGGGGAACTTTTCTATAAAGTCCGATGTGTACAGTTTTGGAGTCTTAATGCTTGAAATCATCAGTGGTAGGAGAAACAACAGCTTCTACAATGATGATCGTGTGCTCACTTTAGCAGGATATACATGGGAGCTATGGAAAAAAGATGCAGCGCTGGAACTAATGGATCCAACACTAGGCAATTCCTGTGATGAGGATCAATTGTTAAGATGCATCCATGTCGGTCTGCTCTGTGTGGAAGAGAAAGCAACCGATCGGCCGAACATGTCGGATCTCATATCTATGTTGACAAATGAAAGCGTGCCTTTACCTAAACCAACAAAGCCAGCATTTTGTACAAGGAGAAATGTGATCACGTCTGGTATAGATAGGAAGGGGCCAGATCTTGAATCTATAAATGGTCTGTCCATTTCTGATTTTGCCGCCCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

680

Amino Acids

76.39

Weight (kDa)

8.33

Isoelectric Point (pI)

46.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	363 - 562	8.4e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	365 - 633	1.2e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21920
fragaria_vesca	FvH4_3g02220 FvH4_3g22640
malus_domestica	MD05G1345200.v1.1 MD10G1320500.v1.1 MD11G1218800.v1.1
prunus_persica	Prupe.4G021600_v2.0.a1 Prupe.4G212400_v2.0.a1
pyrus_communis	pycom03g15280 pycom05g31410 pycom10g27120 pycom11g19280
rosa_chinensis	RchiOBHm_Chr5g0003291 RchiOBHm_Chr5g0039411
rosa_laevigata	RLG00000031122 RLG00000033912
rosa_multiflora	Rmu_co8348757.1_g000001 Rmu_sc0004395.1_g000009 Rmu_sc0007310.1_g000001 Rmu_sc0010917.1_g000007
rosa_roxburghii	Rroxscaffold_1G00040540 Rroxscaffold_1G00072670
rosa_rugosa	Rorug04G0402500 Rorug05G0179000
rosa_samantha	Rh5AG028600 Rh5AG265600 Rh5BG028700 Rh5BG270000 Rh5CG031000 Rh5CG303100 Rh5DG029200 Rh5DG278100
rosa_wichuraiana	Rw0G014060 Rw5G002660 Rw5G002710 Rw5G024890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	53, 486
AccII	CGCG	1 cut(s)	451
AciI	CCGC	2 cut(s)	684, 2034
AcoI	YGGCCR	2 cut(s)	503, 1868
AcsI	RAATTY	3 cut(s)	975, 1183, 1506
AcuI	CTGAAG	1 cut(s)	422
AcyI	GRCGYC	1 cut(s)	223
AfaI	GTAC	5 cut(s)	314, 942, 1310, 1643, 1948
AfeI	AGCGCT	1 cut(s)	1764
AfiI	CCNNNNNNNGG	3 cut(s)	247, 483, 1787
AflIII	ACRYGT	2 cut(s)	1590, 1875
AgsI	TTSAA	9 cut(s)	333, 567, 1259, 1350, 1387, 1397, 1465, 1667, 2000
AhlI	ACTAGT	1 cut(s)	569
AjiI	CACGTC	1 cut(s)	1968
AjnI	CCWGG	3 cut(s)	103, 118, 308
AjuI	GAANNNNNNNTTGG	2 cut(s)	1101, 1133
AloI	GAACNNNNNNTCC	2 cut(s)	951, 983
AluBI	AGCT	8 cut(s)	130, 544, 554, 1053, 1102, 1174, 1695, 1744
AluI	AGCT	8 cut(s)	130, 544, 554, 1053, 1102, 1174, 1695, 1744
Alw21I	GWGCWC	2 cut(s)	216, 1719
Alw26I	GTCTC	3 cut(s)	17, 813, 874
Aor51HI	AGCGCT	1 cut(s)	1764
AoxI	GGCC	5 cut(s)	503, 949, 1467, 1868, 1988
ApeKI	GCWGC	4 cut(s)	397, 629, 1070, 1760
ApoI	RAATTY	3 cut(s)	975, 1183, 1506
ArsI	GACNNNNNNTTYG	2 cut(s)	701, 733
AseI	ATTAAT	2 cut(s)	675, 788
AspA2I	CCTAGG	1 cut(s)	241
AspLEI	GCGC	4 cut(s)	451, 614, 1199, 1765
AspS9I	GGNCC	1 cut(s)	1988
AsuII	TTCGAA	1 cut(s)	291
AvrII	CCTAGG	1 cut(s)	241
BamHI	GGATCC	1 cut(s)	1777
BanI	GGYRCC	2 cut(s)	53, 486
BbsI	GAAGAC	2 cut(s)	351, 502
Bbv12I	GWGCWC	2 cut(s)	216, 1719
BbvI	GCAGC	4 cut(s)	384, 616, 1057, 1772
BccI	CCATC	6 cut(s)	275, 332, 359, 458, 811, 1013
BceAI	ACGGC	2 cut(s)	639, 1148
BcgI	CGANNNNNNTGC	4 cut(s)	441, 475, 1813, 1847
BciT130I	CCWGG	3 cut(s)	105, 120, 310
BclI	TGATCA	1 cut(s)	1962
BcoDI	GTCTC	3 cut(s)	17, 813, 874
BcuI	ACTAGT	1 cut(s)	569
BfaI	CTAG	9 cut(s)	6, 131, 242, 570, 615, 750, 768, 1202, 1787
BfmI	CTRYAG	2 cut(s)	358, 469
BfoI	RGCGCY	3 cut(s)	615, 1200, 1766
BglII	AGATCT	1 cut(s)	1993
BisI	GCNGC	5 cut(s)	398, 630, 1071, 1761, 2034
BlnI	CCTAGG	1 cut(s)	241
BlsI	GCNGC	5 cut(s)	399, 631, 1072, 1762, 2035
Bme1390I	CCNGG	3 cut(s)	105, 120, 310
BmgBI	CACGTC	1 cut(s)	1968
BmgT120I	GGNCC	1 cut(s)	1988
BmiI	GGNNCC	5 cut(s)	55, 99, 488, 1779, 1989
BmrFI	CCNGG	3 cut(s)	105, 120, 310
BmsI	GCATC	4 cut(s)	680, 1747, 1811, 1833
BpiI	GAAGAC	2 cut(s)	351, 502
BplI	GAGNNNNNCTC	2 cut(s)	538, 570
BpmI	CTGGAG	3 cut(s)	87, 1223, 1420
Bpu14I	TTCGAA	1 cut(s)	291
BpuEI	CTTGAG	1 cut(s)	1392
BsaAI	YACGTR	1 cut(s)	839
BsaBI	GATNNNNATC	1 cut(s)	1806
BsaHI	GRCGYC	1 cut(s)	223
BsaJI	CCNNGG	4 cut(s)	241, 308, 366, 655
BsaXI	ACNNNNNCTCC	4 cut(s)	951, 981, 1418, 1448
Bsc4I	CCNNNNNNNGG	3 cut(s)	247, 483, 1787
Bse118I	RCCGGY	2 cut(s)	149, 693
Bse1I	ACTGG	3 cut(s)	885, 1470, 1554
Bse3DI	GCAATG	2 cut(s)	444, 666
Bse8I	GATNNNNATC	1 cut(s)	1806
BseBI	CCWGG	3 cut(s)	105, 120, 310
BseDI	CCNNGG	4 cut(s)	241, 308, 366, 655
BseGI	GGATG	3 cut(s)	695, 1299, 1824
BseJI	GATNNNNATC	1 cut(s)	1806
BseLI	CCNNNNNNNGG	3 cut(s)	247, 483, 1787
BseMI	GCAATG	2 cut(s)	444, 666
BseMII	CTCAG	3 cut(s)	536, 1101, 1590
BseNI	ACTGG	3 cut(s)	885, 1470, 1554
BseRI	GAGGAG	1 cut(s)	90
BseX3I	CGGCCG	1 cut(s)	1868
BseXI	GCAGC	4 cut(s)	384, 616, 1057, 1772
BsgI	GTGCAG	1 cut(s)	726
Bsh1236I	CGCG	1 cut(s)	451
Bsh1285I	CGRYCG	2 cut(s)	1867, 1871
BshFI	GGCC	5 cut(s)	505, 951, 1469, 1870, 1990
BshNI	GGYRCC	2 cut(s)	53, 486
BsiEI	CGRYCG	2 cut(s)	1867, 1871
BsiHKAI	GWGCWC	2 cut(s)	216, 1719
BsiSI	CCGG	4 cut(s)	51, 150, 502, 694
BslFI	GGGAC	2 cut(s)	1164, 1591
BslI	CCNNNNNNNGG	3 cut(s)	247, 483, 1787
BsmAI	GTCTC	3 cut(s)	17, 813, 874
BsmBI	CGTCTC	1 cut(s)	813
BsmFI	GGGAC	2 cut(s)	1164, 1591
BsmI	GAATGC	2 cut(s)	656, 1275
BsnI	GGCC	5 cut(s)	505, 951, 1469, 1870, 1990
Bsp119I	TTCGAA	1 cut(s)	291
Bsp1286I	GDGCHC	2 cut(s)	216, 1719
Bsp1407I	TGTACA	2 cut(s)	1641, 1946
BspACI	CCGC	2 cut(s)	684, 2034
BspANI	GGCC	5 cut(s)	505, 951, 1469, 1870, 1990
BspCNI	CTCAG	3 cut(s)	537, 1100, 1591
BspFNI	CGCG	1 cut(s)	451
BspHI	TCATGA	1 cut(s)	1009
BspLI	GGNNCC	5 cut(s)	55, 99, 488, 1779, 1989
BspT104I	TTCGAA	1 cut(s)	291
BspT107I	GGYRCC	2 cut(s)	53, 486
BsrDI	GCAATG	2 cut(s)	444, 666
BsrFI	RCCGGY	2 cut(s)	149, 693
BsrGI	TGTACA	2 cut(s)	1641, 1946
BsrI	ACTGG	3 cut(s)	885, 1470, 1554
BssAI	RCCGGY	2 cut(s)	149, 693
BssECI	CCNNGG	4 cut(s)	241, 308, 366, 655
BssNI	GRCGYC	1 cut(s)	223
BssT1I	CCWWGG	1 cut(s)	241
Bst2UI	CCWGG	3 cut(s)	105, 120, 310
Bst4CI	ACNGT	3 cut(s)	367, 713, 1646
Bst6I	CTCTTC	2 cut(s)	1281, 1845
BstACI	GRCGYC	1 cut(s)	223
BstAUI	TGTACA	2 cut(s)	1641, 1946
BstBAI	YACGTR	1 cut(s)	839
BstBI	TTCGAA	1 cut(s)	291
BstC8I	GCNNGC	5 cut(s)	453, 556, 904, 1913, 1938
BstDEI	CTNAG	5 cut(s)	491, 545, 1087, 1563, 1599
BstDSI	CCRYGG	2 cut(s)	366, 655
BstENI	CCTNNNNNAGG	1 cut(s)	245
BstF5I	GGATG	3 cut(s)	695, 1299, 1824
BstFNI	CGCG	1 cut(s)	451
BstH2I	RGCGCY	3 cut(s)	615, 1200, 1766
BstHHI	GCGC	4 cut(s)	451, 614, 1199, 1765
BstMAI	GTCTC	3 cut(s)	17, 813, 874
BstMCI	CGRYCG	2 cut(s)	1867, 1871
BstMWI	GCNNNNNNNGC	2 cut(s)	1050, 1423
BstNI	CCWGG	3 cut(s)	105, 120, 310
BstNSI	RCATGY	3 cut(s)	1315, 1594, 1879
BstSCI	CCNGG	3 cut(s)	103, 118, 308
BstSFI	CTRYAG	2 cut(s)	358, 469
BstUI	CGCG	1 cut(s)	451
BstV1I	GCAGC	4 cut(s)	384, 616, 1057, 1772
BstV2I	GAAGAC	2 cut(s)	351, 502
BstX2I	RGATCY	8 cut(s)	415, 746, 764, 829, 1121, 1777, 1882, 1993
BstYI	RGATCY	8 cut(s)	415, 746, 764, 829, 1121, 1777, 1882, 1993
BstZI	CGGCCG	1 cut(s)	1868
BsuRI	GGCC	5 cut(s)	505, 951, 1469, 1870, 1990
BtgI	CCRYGG	2 cut(s)	366, 655
BtgZI	GCGATG	1 cut(s)	477
BtrI	CACGTC	1 cut(s)	1968
BtsCI	GGATG	3 cut(s)	695, 1299, 1824
BtsI	GCAGTG	1 cut(s)	858
BtsIMutI	CAGTG	3 cut(s)	736, 858, 1681
Cac8I	GCNNGC	5 cut(s)	453, 556, 904, 1913, 1938
CciI	TCATGA	1 cut(s)	1009
CfoI	GCGC	4 cut(s)	451, 614, 1199, 1765
Cfr10I	RCCGGY	2 cut(s)	149, 693
Cfr13I	GGNCC	1 cut(s)	1988
CseI	GACGC	1 cut(s)	231
Csp6I	GTAC	5 cut(s)	313, 941, 1309, 1642, 1947
CviAII	CATG	9 cut(s)	393, 517, 1010, 1312, 1495, 1591, 1737, 1829, 1876
CviQI	GTAC	5 cut(s)	313, 941, 1309, 1642, 1947
DdeI	CTNAG	5 cut(s)	491, 545, 1087, 1563, 1599
DraI	TTTAAA	1 cut(s)	277
EaeI	YGGCCR	2 cut(s)	503, 1868
EagI	CGGCCG	1 cut(s)	1868
Eam1104I	CTCTTC	2 cut(s)	1281, 1845
EarI	CTCTTC	2 cut(s)	1281, 1845
EclXI	CGGCCG	1 cut(s)	1868
Eco130I	CCWWGG	1 cut(s)	241
Eco47III	AGCGCT	1 cut(s)	1764
Eco52I	CGGCCG	1 cut(s)	1868
Eco57I	CTGAAG	1 cut(s)	422
EcoNI	CCTNNNNNAGG	1 cut(s)	245
EcoRII	CCWGG	3 cut(s)	103, 118, 308
EcoT14I	CCWWGG	1 cut(s)	241
EcoT22I	ATGCAT	1 cut(s)	1826
ErhI	CCWWGG	1 cut(s)	241
Esp3I	CGTCTC	1 cut(s)	813
FaeI	CATG	9 cut(s)	396, 520, 1013, 1315, 1498, 1594, 1740, 1832, 1879
FalI	AAGNNNNNCTT	6 cut(s)	474, 506, 1401, 1433, 1900, 1932
FaqI	GGGAC	2 cut(s)	1164, 1591
FatI	CATG	9 cut(s)	392, 516, 1009, 1311, 1494, 1590, 1736, 1828, 1875
FauNDI	CATATG	1 cut(s)	1582
FbaI	TGATCA	1 cut(s)	1962
Fnu4HI	GCNGC	5 cut(s)	398, 630, 1071, 1761, 2034
FokI	GGATG	3 cut(s)	702, 1306, 1811
Fsp4HI	GCNGC	5 cut(s)	398, 630, 1071, 1761, 2034
FspBI	CTAG	9 cut(s)	6, 131, 242, 570, 615, 750, 768, 1202, 1787
GlaI	GCGC	4 cut(s)	450, 613, 1198, 1764
GluI	GCNGC	5 cut(s)	398, 630, 1071, 1761, 2034
GsuI	CTGGAG	3 cut(s)	87, 1223, 1420
HaeII	RGCGCY	3 cut(s)	615, 1200, 1766
HaeIII	GGCC	5 cut(s)	505, 951, 1469, 1870, 1990
HapII	CCGG	4 cut(s)	51, 150, 502, 694
HgaI	GACGC	1 cut(s)	231
HhaI	GCGC	4 cut(s)	451, 614, 1199, 1765
Hin1I	GRCGYC	1 cut(s)	223
Hin1II	CATG	9 cut(s)	396, 520, 1013, 1315, 1498, 1594, 1740, 1832, 1879
Hin6I	GCGC	4 cut(s)	449, 612, 1197, 1763
HinP1I	GCGC	4 cut(s)	449, 612, 1197, 1763
HincII	GTYRAC	1 cut(s)	1899
HindII	GTYRAC	1 cut(s)	1899
HindIII	AAGCTT	1 cut(s)	1172
HpaII	CCGG	4 cut(s)	51, 150, 502, 694
Hpy166II	GTNNAC	3 cut(s)	139, 1642, 1899
Hpy188I	TCNGA	8 cut(s)	72, 85, 1090, 1189, 1513, 1636, 1882, 2026
Hpy8I	GTNNAC	3 cut(s)	139, 1642, 1899
Hpy99I	CGWCG	1 cut(s)	225
HpyAV	CCTTC	6 cut(s)	397, 924, 1103, 1391, 1459, 1978
HpyCH4III	ACNGT	3 cut(s)	367, 713, 1646
HpyCH4IV	ACGT	2 cut(s)	838, 1967
HpyCH4V	TGCA	8 cut(s)	232, 516, 624, 707, 1275, 1426, 1760, 1824
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1050, 1423
HpyF3I	CTNAG	5 cut(s)	491, 545, 1087, 1563, 1599
HpySE526I	ACGT	2 cut(s)	838, 1967
Hsp92I	GRCGYC	1 cut(s)	223
Hsp92II	CATG	9 cut(s)	396, 520, 1013, 1315, 1498, 1594, 1740, 1832, 1879
HspAI	GCGC	4 cut(s)	449, 612, 1197, 1763
Ksp22I	TGATCA	1 cut(s)	1962
LmnI	GCTCC	4 cut(s)	103, 211, 959, 1741
Lsp1109I	GCAGC	4 cut(s)	384, 616, 1057, 1772
LweI	GCATC	4 cut(s)	680, 1747, 1811, 1833
MaeI	CTAG	9 cut(s)	6, 131, 242, 570, 615, 750, 768, 1202, 1787
MaeII	ACGT	2 cut(s)	838, 1967
MaeIII	GTNAC	4 cut(s)	162, 1144, 1586, 1593
MboII	GAAGA	5 cut(s)	356, 507, 933, 1298, 1862
MfeI	CAATTG	2 cut(s)	227, 1811
MflI	RGATCY	8 cut(s)	415, 746, 764, 829, 1121, 1777, 1882, 1993
MhlI	GDGCHC	2 cut(s)	216, 1719
MlyI	GAGTC	6 cut(s)	41, 279, 341, 492, 1410, 1662
MmeI	TCCRAC	3 cut(s)	24, 1805, 1860
MnlI	CCTC	8 cut(s)	111, 241, 279, 1284, 1349, 1560, 1606, 1798
Mph1103I	ATGCAT	1 cut(s)	1826
MseI	TTAA	9 cut(s)	60, 276, 675, 788, 822, 1209, 1658, 1817, 2041
MslI	CAYNNNNRTG	2 cut(s)	1014, 1892
MspA1I	CMGCKG	2 cut(s)	544, 686
MspI	CCGG	4 cut(s)	51, 150, 502, 694
MspR9I	CCNGG	3 cut(s)	105, 120, 310
MunI	CAATTG	2 cut(s)	227, 1811
Mva1269I	GAATGC	2 cut(s)	656, 1275
MvaI	CCWGG	3 cut(s)	105, 120, 310
MvnI	CGCG	1 cut(s)	451
MwoI	GCNNNNNNNGC	2 cut(s)	1050, 1423
NdeI	CATATG	1 cut(s)	1582
NlaIII	CATG	9 cut(s)	396, 520, 1013, 1315, 1498, 1594, 1740, 1832, 1879
NlaIV	GGNNCC	5 cut(s)	55, 99, 488, 1779, 1989
NmuCI	GTSAC	3 cut(s)	162, 1144, 1593
NsiI	ATGCAT	1 cut(s)	1826
NspI	RCATGY	3 cut(s)	1315, 1594, 1879
NspV	TTCGAA	1 cut(s)	291
PagI	TCATGA	1 cut(s)	1009
PciI	ACATGT	2 cut(s)	1590, 1875
PctI	GAATGC	2 cut(s)	656, 1275
PfeI	GAWTC	6 cut(s)	92, 735, 1346, 1450, 1498, 2000
PfoI	TCCNGGA	1 cut(s)	103
PkrI	GCNGC	5 cut(s)	399, 631, 1072, 1762, 2035
Ple19I	CGATCG	1 cut(s)	1867
PleI	GAGTC	6 cut(s)	41, 278, 341, 492, 1409, 1661
PpsI	GAGTC	6 cut(s)	41, 278, 341, 492, 1409, 1661
Ppu21I	YACGTR	1 cut(s)	839
PscI	ACATGT	2 cut(s)	1590, 1875
PshBI	ATTAAT	2 cut(s)	675, 788
Psp6I	CCWGG	3 cut(s)	103, 118, 308
PspGI	CCWGG	3 cut(s)	103, 118, 308
PspN4I	GGNNCC	5 cut(s)	55, 99, 488, 1779, 1989
PspPI	GGNCC	1 cut(s)	1988
PsuI	RGATCY	8 cut(s)	415, 746, 764, 829, 1121, 1777, 1882, 1993
PvuI	CGATCG	1 cut(s)	1867
PvuII	CAGCTG	1 cut(s)	544
RsaI	GTAC	5 cut(s)	314, 942, 1310, 1643, 1948
RsaNI	GTAC	5 cut(s)	313, 941, 1309, 1642, 1947
RseI	CAYNNNNRTG	2 cut(s)	1014, 1892
SaqAI	TTAA	9 cut(s)	60, 276, 675, 788, 822, 1209, 1658, 1817, 2041
SatI	GCNGC	5 cut(s)	398, 630, 1071, 1761, 2034
Sau96I	GGNCC	1 cut(s)	1988
SchI	GAGTC	6 cut(s)	41, 279, 341, 492, 1410, 1662
ScrFI	CCNGG	3 cut(s)	105, 120, 310
SduI	GDGCHC	2 cut(s)	216, 1719
SfaNI	GCATC	4 cut(s)	680, 1747, 1811, 1833
SfcI	CTRYAG	2 cut(s)	358, 469
SfuI	TTCGAA	1 cut(s)	291
SmiMI	CAYNNNNRTG	2 cut(s)	1014, 1892
SmlI	CTYRAG	1 cut(s)	1407
SmoI	CTYRAG	1 cut(s)	1407
SpeI	ACTAGT	1 cut(s)	569
SsiI	CCGC	2 cut(s)	684, 2034
SspI	AATATT	1 cut(s)	1477
SspMI	CTAG	9 cut(s)	6, 131, 242, 570, 615, 750, 768, 1202, 1787
StyD4I	CCNGG	3 cut(s)	103, 118, 308
StyI	CCWWGG	1 cut(s)	241
TaaI	ACNGT	3 cut(s)	367, 713, 1646
TaiI	ACGT	2 cut(s)	841, 1970
TaqI	TCGA	2 cut(s)	291, 1368
TaqII	GACCGA	1 cut(s)	1823
TatI	WGTACW	4 cut(s)	940, 1308, 1641, 1946
TauI	GCSGC	1 cut(s)	2036
TfiI	GAWTC	6 cut(s)	92, 735, 1346, 1450, 1498, 2000
Tru1I	TTAA	9 cut(s)	60, 276, 675, 788, 822, 1209, 1658, 1817, 2041
Tru9I	TTAA	9 cut(s)	60, 276, 675, 788, 822, 1209, 1658, 1817, 2041
TscAI	CASTG	3 cut(s)	736, 865, 1681
TseFI	GTSAC	3 cut(s)	162, 1144, 1593
TseI	GCWGC	4 cut(s)	397, 629, 1070, 1760
Tsp45I	GTSAC	3 cut(s)	162, 1144, 1593
TspRI	CASTG	3 cut(s)	736, 865, 1681
VspI	ATTAAT	2 cut(s)	675, 788
XagI	CCTNNNNNAGG	1 cut(s)	245
XapI	RAATTY	3 cut(s)	975, 1183, 1506
XbaI	TCTAGA	1 cut(s)	1201
XceI	RCATGY	3 cut(s)	1315, 1594, 1879
XmaJI	CCTAGG	1 cut(s)	241
XspI	CTAG	9 cut(s)	6, 131, 242, 570, 615, 750, 768, 1202, 1787
Zsp2I	ATGCAT	1 cut(s)	1826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.