Basic Information
Type: gene
Biological Identity
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
29074625 .. 29074840
Rorug05G0258800.1
Length: 216 bp
ATGTTGGCAATACCCGAGCATGAGATGAAGATGAATCGACATTTAAGGGTTGTCATTGTTGGTTTTATCTGTGATTTTTTCAATGTCCGCATGTATGGCTCTCCTCTTTTCAACGTCAGTACTGTCATTAAAACAAAGAGTGTGAAATATATGCCATTCTCGCTCTCACTTTCCAATTTTGAATGGTTGTTGCTGGACTTCCTATGCTCTTATTGA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
Protein Analysis
8.71
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| MtN3_slv |
PF03083 |
19 - 60 |
5.7e-09 |
Sugar efflux transporter for intercellular exchange |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0003241)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AciI |
CCGC |
1 cut(s)
|
88 |
| AfaI |
GTAC |
1 cut(s)
|
121 |
| AgsI |
TTSAA |
3 cut(s)
|
82, 112, 182 |
| Ama87I |
CYCGRG |
1 cut(s)
|
14 |
| AvaI |
CYCGRG |
1 cut(s)
|
14 |
| BmcAI |
AGTACT |
1 cut(s)
|
121 |
| BmeT110I |
CYCGRG |
1 cut(s)
|
14 |
| BseRI |
GAGGAG |
1 cut(s)
|
93 |
| BsiHKCI |
CYCGRG |
1 cut(s)
|
14 |
| BsoBI |
CYCGRG |
1 cut(s)
|
14 |
| BspACI |
CCGC |
1 cut(s)
|
88 |
| Bst4CI |
ACNGT |
1 cut(s)
|
124 |
| BstMWI |
GCNNNNNNNGC |
2 cut(s)
|
96, 160 |
| BstNSI |
RCATGY |
1 cut(s)
|
94 |
| Csp6I |
GTAC |
1 cut(s)
|
120 |
| CviAII |
CATG |
2 cut(s)
|
20, 91 |
| CviJI |
RGCY |
1 cut(s)
|
99 |
| CviKI_1 |
RGCY |
1 cut(s)
|
99 |
| CviQI |
GTAC |
1 cut(s)
|
120 |
| Eco88I |
CYCGRG |
1 cut(s)
|
14 |
| FaeI |
CATG |
2 cut(s)
|
23, 94 |
| FaiI |
YATR |
6 cut(s)
|
21, 92, 96, 150, 152, 205 |
| FatI |
CATG |
2 cut(s)
|
19, 90 |
| Hin1II |
CATG |
2 cut(s)
|
23, 94 |
| HinfI |
GANTC |
1 cut(s)
|
34 |
| HpyCH4III |
ACNGT |
1 cut(s)
|
124 |
| HpyCH4IV |
ACGT |
1 cut(s)
|
114 |
| HpyF10VI |
GCNNNNNNNGC |
2 cut(s)
|
96, 160 |
| HpySE526I |
ACGT |
1 cut(s)
|
114 |
| Hsp92II |
CATG |
2 cut(s)
|
23, 94 |
| LpnPI |
CCDG |
1 cut(s)
|
179 |
| MaeII |
ACGT |
1 cut(s)
|
114 |
| MboII |
GAAGA |
1 cut(s)
|
40 |
| MluCI |
AATT |
1 cut(s)
|
175 |
| MnlI |
CCTC |
1 cut(s)
|
114 |
| MseI |
TTAA |
2 cut(s)
|
44, 129 |
| MwoI |
GCNNNNNNNGC |
2 cut(s)
|
96, 160 |
| NlaIII |
CATG |
2 cut(s)
|
23, 94 |
| NspI |
RCATGY |
1 cut(s)
|
94 |
| PfeI |
GAWTC |
1 cut(s)
|
34 |
| RsaI |
GTAC |
1 cut(s)
|
121 |
| RsaNI |
GTAC |
1 cut(s)
|
120 |
| SaqAI |
TTAA |
2 cut(s)
|
44, 129 |
| ScaI |
AGTACT |
1 cut(s)
|
121 |
| SetI |
ASST |
1 cut(s)
|
117 |
| SgeI |
CNNG |
6 cut(s)
|
26, 28, 32, 103, 172, 206 |
| Sse9I |
AATT |
1 cut(s)
|
175 |
| SsiI |
CCGC |
1 cut(s)
|
88 |
| TaaI |
ACNGT |
1 cut(s)
|
124 |
| TaiI |
ACGT |
1 cut(s)
|
117 |
| TaqI |
TCGA |
1 cut(s)
|
37 |
| TasI |
AATT |
1 cut(s)
|
175 |
| TatI |
WGTACW |
1 cut(s)
|
119 |
| TfiI |
GAWTC |
1 cut(s)
|
34 |
| Tru1I |
TTAA |
2 cut(s)
|
44, 129 |
| Tru9I |
TTAA |
2 cut(s)
|
44, 129 |
| TspDTI |
ATGAA |
2 cut(s)
|
41, 47 |
| XceI |
RCATGY |
1 cut(s)
|
94 |
| ZrmI |
AGTACT |
1 cut(s)
|
121 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.