Protein RETICULATA-related
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22790 |
| fragaria_vesca | FvH4_3g30080 FvH4_3g30080 FvH4_3g30080 |
| malus_domestica | MD03G1132600.v1.1 MD11G1154900.v1.1 |
| prunus_persica | Prupe.6G117100_v2.0.a1 |
| pyrus_communis | pycom11g12630 pycom11g12640 |
| rosa_chinensis | RchiOBHm_Chr5g0055771 |
| rosa_laevigata | RLG00000035009 |
| rosa_multiflora | Rmu_sc0007355.1_g000014 Rmu_sc0037521.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00024560 |
| rosa_rugosa | Rorug05G0294800 |
| rosa_samantha | Rh5AG365700 Rh5BG376200 Rh5CG399300 Rh5DG389300 |
| rosa_wichuraiana | Rw5G034300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 227 |
| AccII | CGCG | 1 cut(s) | 258 |
| AciI | CCGC | 1 cut(s) | 154 |
| AcvI | CACGTG | 1 cut(s) | 43 |
| AflIII | ACRYGT | 1 cut(s) | 40 |
| AgsI | TTSAA | 1 cut(s) | 17 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 67 |
| AleI | CACNNNNGTG | 1 cut(s) | 312 |
| AluBI | AGCT | 1 cut(s) | 302 |
| AluI | AGCT | 1 cut(s) | 302 |
| ApeKI | GCWGC | 3 cut(s) | 4, 139, 299 |
| AspLEI | GCGC | 1 cut(s) | 258 |
| AsuHPI | GGTGA | 2 cut(s) | 91, 223 |
| BbrPI | CACGTG | 1 cut(s) | 43 |
| BbvI | GCAGC | 2 cut(s) | 126, 311 |
| BfaI | CTAG | 1 cut(s) | 126 |
| BfmI | CTRYAG | 1 cut(s) | 147 |
| BisI | GCNGC | 3 cut(s) | 5, 140, 300 |
| BlsI | GCNGC | 3 cut(s) | 6, 141, 301 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 67 |
| BmsI | GCATC | 1 cut(s) | 72 |
| BsaAI | YACGTR | 1 cut(s) | 43 |
| BseGI | GGATG | 2 cut(s) | 289, 309 |
| BseMII | CTCAG | 1 cut(s) | 237 |
| BseXI | GCAGC | 2 cut(s) | 126, 311 |
| Bsh1236I | CGCG | 1 cut(s) | 258 |
| BslFI | GGGAC | 1 cut(s) | 74 |
| BsmFI | GGGAC | 1 cut(s) | 74 |
| BspACI | CCGC | 1 cut(s) | 154 |
| BspCNI | CTCAG | 1 cut(s) | 238 |
| BspFNI | CGCG | 1 cut(s) | 258 |
| BspHI | TCATGA | 1 cut(s) | 201 |
| Bst4CI | ACNGT | 1 cut(s) | 67 |
| BstBAI | YACGTR | 1 cut(s) | 43 |
| BstC8I | GCNNGC | 1 cut(s) | 154 |
| BstDEI | CTNAG | 1 cut(s) | 246 |
| BstF5I | GGATG | 2 cut(s) | 289, 309 |
| BstFNI | CGCG | 1 cut(s) | 258 |
| BstHHI | GCGC | 1 cut(s) | 258 |
| BstSFI | CTRYAG | 1 cut(s) | 147 |
| BstUI | CGCG | 1 cut(s) | 258 |
| BstV1I | GCAGC | 2 cut(s) | 126, 311 |
| BtsCI | GGATG | 2 cut(s) | 289, 309 |
| Cac8I | GCNNGC | 1 cut(s) | 154 |
| CciI | TCATGA | 1 cut(s) | 201 |
| CfoI | GCGC | 1 cut(s) | 258 |
| CviAII | CATG | 1 cut(s) | 202 |
| CviJI | RGCY | 2 cut(s) | 152, 302 |
| CviKI_1 | RGCY | 2 cut(s) | 152, 302 |
| DdeI | CTNAG | 1 cut(s) | 246 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 227 |
| DriI | GACNNNNNGTC | 1 cut(s) | 67 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 227 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 67 |
| Eco72I | CACGTG | 1 cut(s) | 43 |
| FaeI | CATG | 1 cut(s) | 205 |
| FaiI | YATR | 5 cut(s) | 162, 203, 217, 219, 237 |
| FaqI | GGGAC | 1 cut(s) | 74 |
| FatI | CATG | 1 cut(s) | 201 |
| FauI | CCCGC | 1 cut(s) | 161 |
| FauNDI | CATATG | 1 cut(s) | 217 |
| Fnu4HI | GCNGC | 3 cut(s) | 5, 140, 300 |
| FokI | GGATG | 2 cut(s) | 296, 296 |
| Fsp4HI | GCNGC | 3 cut(s) | 5, 140, 300 |
| FspBI | CTAG | 1 cut(s) | 126 |
| GlaI | GCGC | 1 cut(s) | 257 |
| GluI | GCNGC | 3 cut(s) | 5, 140, 300 |
| HhaI | GCGC | 1 cut(s) | 258 |
| Hin1II | CATG | 1 cut(s) | 205 |
| Hin6I | GCGC | 1 cut(s) | 256 |
| HinP1I | GCGC | 1 cut(s) | 256 |
| HinfI | GANTC | 2 cut(s) | 87, 260 |
| HphI | GGTGA | 2 cut(s) | 91, 223 |
| Hpy188I | TCNGA | 2 cut(s) | 73, 247 |
| Hpy188III | TCNNGA | 1 cut(s) | 202 |
| HpyAV | CCTTC | 1 cut(s) | 199 |
| HpyCH4III | ACNGT | 1 cut(s) | 67 |
| HpyCH4IV | ACGT | 2 cut(s) | 19, 42 |
| HpyCH4V | TGCA | 2 cut(s) | 107, 299 |
| HpyF3I | CTNAG | 1 cut(s) | 246 |
| HpySE526I | ACGT | 2 cut(s) | 19, 42 |
| Hsp92II | CATG | 1 cut(s) | 205 |
| HspAI | GCGC | 1 cut(s) | 256 |
| LpnPI | CCDG | 4 cut(s) | 21, 82, 93, 291 |
| Lsp1109I | GCAGC | 2 cut(s) | 126, 311 |
| LweI | GCATC | 1 cut(s) | 72 |
| MaeI | CTAG | 1 cut(s) | 126 |
| MaeII | ACGT | 2 cut(s) | 19, 42 |
| MaeIII | GTNAC | 3 cut(s) | 20, 229, 305 |
| MboII | GAAGA | 1 cut(s) | 82 |
| MluCI | AATT | 1 cut(s) | 29 |
| MlyI | GAGTC | 1 cut(s) | 254 |
| MmeI | TCCRAC | 1 cut(s) | 51 |
| MnlI | CCTC | 4 cut(s) | 19, 233, 241, 280 |
| MslI | CAYNNNNRTG | 1 cut(s) | 312 |
| MvnI | CGCG | 1 cut(s) | 258 |
| NdeI | CATATG | 1 cut(s) | 217 |
| NlaIII | CATG | 1 cut(s) | 205 |
| NmuCI | GTSAC | 3 cut(s) | 20, 229, 305 |
| OliI | CACNNNNGTG | 1 cut(s) | 312 |
| PagI | TCATGA | 1 cut(s) | 201 |
| PfeI | GAWTC | 1 cut(s) | 87 |
| PkrI | GCNGC | 3 cut(s) | 6, 141, 301 |
| PleI | GAGTC | 1 cut(s) | 254 |
| PmaCI | CACGTG | 1 cut(s) | 43 |
| PmlI | CACGTG | 1 cut(s) | 43 |
| PpsI | GAGTC | 1 cut(s) | 254 |
| Ppu21I | YACGTR | 1 cut(s) | 43 |
| PspCI | CACGTG | 1 cut(s) | 43 |
| RseI | CAYNNNNRTG | 1 cut(s) | 312 |
| SatI | GCNGC | 3 cut(s) | 5, 140, 300 |
| SchI | GAGTC | 1 cut(s) | 254 |
| SetI | ASST | 9 cut(s) | 22, 45, 101, 210, 225, 236, 252, 280, 304 |
| SfaNI | GCATC | 1 cut(s) | 72 |
| SfcI | CTRYAG | 1 cut(s) | 147 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 312 |
| Sse9I | AATT | 1 cut(s) | 29 |
| SsiI | CCGC | 1 cut(s) | 154 |
| SspMI | CTAG | 1 cut(s) | 126 |
| TaaI | ACNGT | 1 cut(s) | 67 |
| TaiI | ACGT | 2 cut(s) | 22, 45 |
| TaqI | TCGA | 1 cut(s) | 274 |
| TasI | AATT | 1 cut(s) | 29 |
| TfiI | GAWTC | 1 cut(s) | 87 |
| TseFI | GTSAC | 3 cut(s) | 20, 229, 305 |
| TseI | GCWGC | 3 cut(s) | 4, 139, 299 |
| Tsp45I | GTSAC | 3 cut(s) | 20, 229, 305 |
| TspDTI | ATGAA | 3 cut(s) | 190, 204, 218 |
| TspGWI | ACGGA | 1 cut(s) | 302 |
| XspI | CTAG | 1 cut(s) | 126 |