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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33780 |
| fragaria_vesca | FvH4_2g03150 FvH4_2g03150 FvH4_2g03150 FvH4_2g03150 FvH4_2g03150 |
| malus_domestica | MD05G1106700.v1.1 MD10G1111500.v1.1 |
| prunus_persica | Prupe.8G150800_v2.0.a1 Prupe.8G150800_v2.0.a1 Prupe.8G150800_v2.0.a1 |
| pyrus_communis | pycom05g10360 pycom10g09630 |
| rosa_chinensis | RchiOBHm_Chr6g0248281 |
| rosa_multiflora | Rmu_sc0005018.1_g000005 Rmu_sc0005018.1_g000008 Rmu_ssc0000359.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00213430 |
| rosa_rugosa | Rorug05G0530400 Rorug05G0530500 Rorug05G0530500 Rorug05G0530600.1 Rorug05G0530700 |
| rosa_samantha | Rh6AG045700 Rh6BG041400 Rh6BG041800 Rh6BG042100 Rh6CG039000 Rh6DG035800 |
| rosa_wichuraiana | Rw6G003960 Rw6G003990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 53 |
| AclWI | GGATC | 4 cut(s) | 302, 315, 1579, 1766 |
| AcuI | CTGAAG | 5 cut(s) | 749, 1806, 1839, 2402, 2417 |
| AfaI | GTAC | 2 cut(s) | 1585, 2135 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 255, 394, 695, 1131, 1748, 2218 |
| AflIII | ACRYGT | 2 cut(s) | 1689, 1804 |
| AgeI | ACCGGT | 1 cut(s) | 634 |
| AjnI | CCWGG | 1 cut(s) | 655 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 36 |
| AluBI | AGCT | 7 cut(s) | 135, 158, 374, 502, 584, 2424, 2471 |
| AluI | AGCT | 7 cut(s) | 135, 158, 374, 502, 584, 2424, 2471 |
| Alw26I | GTCTC | 2 cut(s) | 226, 1770 |
| AlwI | GGATC | 4 cut(s) | 302, 315, 1579, 1766 |
| Ama87I | CYCGRG | 2 cut(s) | 481, 1767 |
| AoxI | GGCC | 2 cut(s) | 1037, 2007 |
| ApeKI | GCWGC | 6 cut(s) | 112, 499, 1423, 2105, 2468, 2471 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1723, 1755 |
| AsiGI | ACCGGT | 1 cut(s) | 634 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 322, 716, 854 |
| AspS9I | GGNCC | 3 cut(s) | 637, 663, 1925 |
| AsuC2I | CCSGG | 1 cut(s) | 1234 |
| AsuHPI | GGTGA | 3 cut(s) | 636, 1167, 1842 |
| AvaI | CYCGRG | 2 cut(s) | 481, 1767 |
| AvaII | GGWCC | 3 cut(s) | 637, 663, 1925 |
| AxyI | CCTNAGG | 1 cut(s) | 2349 |
| BamHI | GGATCC | 1 cut(s) | 307 |
| BbsI | GAAGAC | 2 cut(s) | 1002, 1462 |
| BbvI | GCAGC | 6 cut(s) | 124, 511, 1410, 2117, 2458, 2480 |
| BciT130I | CCWGG | 1 cut(s) | 657 |
| BclI | TGATCA | 1 cut(s) | 1960 |
| BcnI | CCSGG | 1 cut(s) | 1234 |
| BcoDI | GTCTC | 2 cut(s) | 226, 1770 |
| BfaI | CTAG | 2 cut(s) | 1796, 2049 |
| BglII | AGATCT | 1 cut(s) | 1058 |
| BisI | GCNGC | 6 cut(s) | 113, 500, 1424, 2106, 2469, 2472 |
| BlsI | GCNGC | 6 cut(s) | 114, 501, 1425, 2107, 2470, 2473 |
| Bme1390I | CCNGG | 2 cut(s) | 657, 1234 |
| Bme18I | GGWCC | 3 cut(s) | 637, 663, 1925 |
| BmeT110I | CYCGRG | 2 cut(s) | 481, 1767 |
| BmgT120I | GGNCC | 3 cut(s) | 637, 663, 1925 |
| BmiI | GGNNCC | 2 cut(s) | 309, 1714 |
| BmrFI | CCNGG | 2 cut(s) | 657, 1234 |
| BmsI | GCATC | 8 cut(s) | 115, 410, 1065, 1801, 2092, 2149, 2234, 2403 |
| BpiI | GAAGAC | 2 cut(s) | 1002, 1462 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 983, 1015, 1367, 1399 |
| BpuEI | CTTGAG | 1 cut(s) | 1010 |
| BpuMI | CCSGG | 1 cut(s) | 1234 |
| BsaJI | CCNNGG | 2 cut(s) | 1233, 2010 |
| BsaWI | WCCGGW | 1 cut(s) | 634 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1027, 1057, 1957, 1987 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 255, 394, 695, 1131, 1748, 2218 |
| Bse118I | RCCGGY | 1 cut(s) | 634 |
| Bse1I | ACTGG | 2 cut(s) | 572, 1716 |
| Bse21I | CCTNAGG | 1 cut(s) | 2349 |
| Bse3DI | GCAATG | 4 cut(s) | 14, 541, 689, 805 |
| BseBI | CCWGG | 1 cut(s) | 657 |
| BseDI | CCNNGG | 2 cut(s) | 1233, 2010 |
| BseGI | GGATG | 8 cut(s) | 18, 556, 745, 976, 1098, 1816, 2164, 2275 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 255, 394, 695, 1131, 1748, 2218 |
| BseMI | GCAATG | 4 cut(s) | 14, 541, 689, 805 |
| BseMII | CTCAG | 9 cut(s) | 211, 807, 1331, 1668, 1886, 2208, 2334, 2363, 2417 |
| BseNI | ACTGG | 2 cut(s) | 572, 1716 |
| BseRI | GAGGAG | 4 cut(s) | 330, 1887, 2027, 2234 |
| BseXI | GCAGC | 6 cut(s) | 124, 511, 1410, 2117, 2458, 2480 |
| BseYI | CCCAGC | 1 cut(s) | 158 |
| BsgI | GTGCAG | 3 cut(s) | 1413, 2457, 2468 |
| BshFI | GGCC | 2 cut(s) | 1039, 2009 |
| BshTI | ACCGGT | 1 cut(s) | 634 |
| BsiHKCI | CYCGRG | 2 cut(s) | 481, 1767 |
| BsiSI | CCGG | 2 cut(s) | 635, 1233 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 255, 394, 695, 1131, 1748, 2218 |
| BsmAI | GTCTC | 2 cut(s) | 226, 1770 |
| BsmI | GAATGC | 1 cut(s) | 1784 |
| BsnI | GGCC | 2 cut(s) | 1039, 2009 |
| BsoBI | CYCGRG | 2 cut(s) | 481, 1767 |
| Bsp1407I | TGTACA | 1 cut(s) | 1583 |
| Bsp143I | GATC | 8 cut(s) | 295, 307, 1058, 1210, 1571, 1771, 1960, 2120 |
| BspANI | GGCC | 2 cut(s) | 1039, 2009 |
| BspCNI | CTCAG | 9 cut(s) | 210, 808, 1332, 1669, 1885, 2209, 2335, 2362, 2416 |
| BspHI | TCATGA | 2 cut(s) | 892, 1888 |
| BspLI | GGNNCC | 2 cut(s) | 309, 1714 |
| BspPI | GGATC | 4 cut(s) | 302, 315, 1579, 1766 |
| BsrDI | GCAATG | 4 cut(s) | 14, 541, 689, 805 |
| BsrFI | RCCGGY | 1 cut(s) | 634 |
| BsrGI | TGTACA | 1 cut(s) | 1583 |
| BsrI | ACTGG | 2 cut(s) | 572, 1716 |
| BssAI | RCCGGY | 1 cut(s) | 634 |
| BssECI | CCNNGG | 2 cut(s) | 1233, 2010 |
| BssMI | GATC | 8 cut(s) | 295, 307, 1058, 1210, 1571, 1771, 1960, 2120 |
| Bst2UI | CCWGG | 1 cut(s) | 657 |
| Bst4CI | ACNGT | 7 cut(s) | 698, 766, 1055, 1448, 1832, 2138, 2266 |
| Bst6I | CTCTTC | 3 cut(s) | 1368, 2234, 2310 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2111, 2159 |
| BstAUI | TGTACA | 1 cut(s) | 1583 |
| BstC8I | GCNNGC | 4 cut(s) | 244, 1282, 1333, 1750 |
| BstF5I | GGATG | 8 cut(s) | 18, 556, 745, 976, 1098, 1816, 2164, 2275 |
| BstKTI | GATC | 8 cut(s) | 298, 310, 1061, 1213, 1574, 1774, 1963, 2123 |
| BstMAI | GTCTC | 2 cut(s) | 226, 1770 |
| BstMBI | GATC | 8 cut(s) | 295, 307, 1058, 1210, 1571, 1771, 1960, 2120 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 112, 590, 2111, 2159 |
| BstNI | CCWGG | 1 cut(s) | 657 |
| BstNSI | RCATGY | 2 cut(s) | 1693, 1808 |
| BstSCI | CCNGG | 2 cut(s) | 655, 1232 |
| BstV1I | GCAGC | 6 cut(s) | 124, 511, 1410, 2117, 2458, 2480 |
| BstV2I | GAAGAC | 2 cut(s) | 1002, 1462 |
| BstX2I | RGATCY | 3 cut(s) | 307, 1058, 1771 |
| BstYI | RGATCY | 3 cut(s) | 307, 1058, 1771 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2349 |
| BsuRI | GGCC | 2 cut(s) | 1039, 2009 |
| BtsCI | GGATG | 8 cut(s) | 18, 556, 745, 976, 1098, 1816, 2164, 2275 |
| BtsI | GCAGTG | 2 cut(s) | 1375, 1401 |
| BtsIMutI | CAGTG | 6 cut(s) | 56, 1375, 1401, 1828, 2143, 2271 |
| Cac8I | GCNNGC | 4 cut(s) | 244, 1282, 1333, 1750 |
| CciI | TCATGA | 2 cut(s) | 892, 1888 |
| Cfr10I | RCCGGY | 1 cut(s) | 634 |
| Cfr13I | GGNCC | 3 cut(s) | 637, 663, 1925 |
| CseI | GACGC | 2 cut(s) | 722, 2474 |
| Csp6I | GTAC | 2 cut(s) | 1584, 2134 |
| CspAI | ACCGGT | 1 cut(s) | 634 |
| CviQI | GTAC | 2 cut(s) | 1584, 2134 |
| DpnI | GATC | 8 cut(s) | 297, 309, 1060, 1212, 1573, 1773, 1962, 2122 |
| DpnII | GATC | 8 cut(s) | 295, 307, 1058, 1210, 1571, 1771, 1960, 2120 |
| DraI | TTTAAA | 1 cut(s) | 1612 |
| Eam1104I | CTCTTC | 3 cut(s) | 1368, 2234, 2310 |
| EarI | CTCTTC | 3 cut(s) | 1368, 2234, 2310 |
| Eco32I | GATATC | 1 cut(s) | 778 |
| Eco47I | GGWCC | 3 cut(s) | 637, 663, 1925 |
| Eco57I | CTGAAG | 5 cut(s) | 749, 1806, 1839, 2402, 2417 |
| Eco81I | CCTNAGG | 1 cut(s) | 2349 |
| Eco88I | CYCGRG | 2 cut(s) | 481, 1767 |
| EcoO109I | RGGNCCY | 1 cut(s) | 663 |
| EcoRI | GAATTC | 1 cut(s) | 2384 |
| EcoRII | CCWGG | 1 cut(s) | 655 |
| EcoRV | GATATC | 1 cut(s) | 778 |
| EcoT22I | ATGCAT | 2 cut(s) | 142, 1080 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 307, 339, 2347, 2379 |
| FauNDI | CATATG | 1 cut(s) | 292 |
| FbaI | TGATCA | 1 cut(s) | 1960 |
| FblI | GTMKAC | 1 cut(s) | 53 |
| Fnu4HI | GCNGC | 6 cut(s) | 113, 500, 1424, 2106, 2469, 2472 |
| FokI | GGATG | 8 cut(s) | 25, 563, 752, 983, 1105, 1823, 2171, 2282 |
| Fsp4HI | GCNGC | 6 cut(s) | 113, 500, 1424, 2106, 2469, 2472 |
| FspBI | CTAG | 2 cut(s) | 1796, 2049 |
| GluI | GCNGC | 6 cut(s) | 113, 500, 1424, 2106, 2469, 2472 |
| GsaI | CCCAGC | 1 cut(s) | 162 |
| HaeIII | GGCC | 2 cut(s) | 1039, 2009 |
| HapII | CCGG | 2 cut(s) | 635, 1233 |
| HgaI | GACGC | 2 cut(s) | 722, 2474 |
| HincII | GTYRAC | 3 cut(s) | 1434, 1653, 2392 |
| HindII | GTYRAC | 3 cut(s) | 1434, 1653, 2392 |
| HpaII | CCGG | 2 cut(s) | 635, 1233 |
| HphI | GGTGA | 3 cut(s) | 636, 1167, 1842 |
| HpyCH4III | ACNGT | 7 cut(s) | 698, 766, 1055, 1448, 1832, 2138, 2266 |
| HpyCH4IV | ACGT | 1 cut(s) | 588 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 112, 590, 2111, 2159 |
| HpySE526I | ACGT | 1 cut(s) | 588 |
| Ksp22I | TGATCA | 1 cut(s) | 1960 |
| Kzo9I | GATC | 8 cut(s) | 295, 307, 1058, 1210, 1571, 1771, 1960, 2120 |
| LmnI | GCTCC | 3 cut(s) | 343, 433, 686 |
| Lsp1109I | GCAGC | 6 cut(s) | 124, 511, 1410, 2117, 2458, 2480 |
| LweI | GCATC | 8 cut(s) | 115, 410, 1065, 1801, 2092, 2149, 2234, 2403 |
| MaeI | CTAG | 2 cut(s) | 1796, 2049 |
| MaeII | ACGT | 1 cut(s) | 588 |
| MaeIII | GTNAC | 3 cut(s) | 286, 1173, 1903 |
| MalI | GATC | 8 cut(s) | 297, 309, 1060, 1212, 1573, 1773, 1962, 2122 |
| MboI | GATC | 8 cut(s) | 295, 307, 1058, 1210, 1571, 1771, 1960, 2120 |
| MfeI | CAATTG | 1 cut(s) | 1666 |
| MflI | RGATCY | 3 cut(s) | 307, 1058, 1771 |
| MlyI | GAGTC | 7 cut(s) | 518, 992, 1181, 1385, 1886, 2251, 2387 |
| MmeI | TCCRAC | 1 cut(s) | 2300 |
| Mph1103I | ATGCAT | 2 cut(s) | 142, 1080 |
| MroXI | GAANNNNTTC | 3 cut(s) | 322, 716, 854 |
| MseI | TTAA | 7 cut(s) | 354, 360, 824, 1005, 1263, 1611, 2370 |
| MslI | CAYNNNNRTG | 2 cut(s) | 767, 1809 |
| MspA1I | CMGCKG | 2 cut(s) | 158, 2471 |
| MspI | CCGG | 2 cut(s) | 635, 1233 |
| MspR9I | CCNGG | 2 cut(s) | 657, 1234 |
| MssI | GTTTAAAC | 1 cut(s) | 1612 |
| MunI | CAATTG | 1 cut(s) | 1666 |
| Mva1269I | GAATGC | 1 cut(s) | 1784 |
| MvaI | CCWGG | 1 cut(s) | 657 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 112, 590, 2111, 2159 |
| NciI | CCSGG | 1 cut(s) | 1234 |
| NdeI | CATATG | 1 cut(s) | 292 |
| NdeII | GATC | 8 cut(s) | 295, 307, 1058, 1210, 1571, 1771, 1960, 2120 |
| NlaIV | GGNNCC | 2 cut(s) | 309, 1714 |
| NmeAIII | GCCGAG | 1 cut(s) | 2035 |
| NmuCI | GTSAC | 2 cut(s) | 286, 1173 |
| NsiI | ATGCAT | 2 cut(s) | 142, 1080 |
| NspI | RCATGY | 2 cut(s) | 1693, 1808 |
| PaeR7I | CTCGAG | 2 cut(s) | 481, 1767 |
| PagI | TCATGA | 2 cut(s) | 892, 1888 |
| PciI | ACATGT | 2 cut(s) | 1689, 1804 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1785 |
| PctI | GAATGC | 1 cut(s) | 1784 |
| PdmI | GAANNNNTTC | 3 cut(s) | 322, 716, 854 |
| PfeI | GAWTC | 7 cut(s) | 377, 830, 1418, 1706, 2165, 2282, 2339 |
| PinAI | ACCGGT | 1 cut(s) | 634 |
| PkrI | GCNGC | 6 cut(s) | 114, 501, 1425, 2107, 2470, 2473 |
| PleI | GAGTC | 7 cut(s) | 517, 992, 1180, 1384, 1886, 2250, 2387 |
| PmeI | GTTTAAAC | 1 cut(s) | 1612 |
| PpsI | GAGTC | 7 cut(s) | 517, 992, 1180, 1384, 1886, 2250, 2387 |
| PpuMI | RGGWCCY | 1 cut(s) | 663 |
| PscI | ACATGT | 2 cut(s) | 1689, 1804 |
| Psp5II | RGGWCCY | 1 cut(s) | 663 |
| Psp6I | CCWGG | 1 cut(s) | 655 |
| PspFI | CCCAGC | 1 cut(s) | 158 |
| PspGI | CCWGG | 1 cut(s) | 655 |
| PspN4I | GGNNCC | 2 cut(s) | 309, 1714 |
| PspPI | GGNCC | 3 cut(s) | 637, 663, 1925 |
| PspPPI | RGGWCCY | 1 cut(s) | 663 |
| PspXI | VCTCGAGB | 1 cut(s) | 481 |
| PsuI | RGATCY | 3 cut(s) | 307, 1058, 1771 |
| PvuII | CAGCTG | 2 cut(s) | 158, 2471 |
| RsaI | GTAC | 2 cut(s) | 1585, 2135 |
| RsaNI | GTAC | 2 cut(s) | 1584, 2134 |
| RseI | CAYNNNNRTG | 2 cut(s) | 767, 1809 |
| SaqAI | TTAA | 7 cut(s) | 354, 360, 824, 1005, 1263, 1611, 2370 |
| SatI | GCNGC | 6 cut(s) | 113, 500, 1424, 2106, 2469, 2472 |
| Sau3AI | GATC | 8 cut(s) | 295, 307, 1058, 1210, 1571, 1771, 1960, 2120 |
| Sau96I | GGNCC | 3 cut(s) | 637, 663, 1925 |
| SchI | GAGTC | 7 cut(s) | 518, 992, 1181, 1385, 1886, 2251, 2387 |
| ScrFI | CCNGG | 2 cut(s) | 657, 1234 |
| SfaNI | GCATC | 8 cut(s) | 115, 410, 1065, 1801, 2092, 2149, 2234, 2403 |
| Sfr274I | CTCGAG | 2 cut(s) | 481, 1767 |
| SinI | GGWCC | 3 cut(s) | 637, 663, 1925 |
| SlaI | CTCGAG | 2 cut(s) | 481, 1767 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 767, 1809 |
| SmlI | CTYRAG | 3 cut(s) | 481, 989, 1767 |
| SmoI | CTYRAG | 3 cut(s) | 481, 989, 1767 |
| SspI | AATATT | 3 cut(s) | 77, 933, 1561 |
| SspMI | CTAG | 2 cut(s) | 1796, 2049 |
| StyD4I | CCNGG | 2 cut(s) | 655, 1232 |
| TaaI | ACNGT | 7 cut(s) | 698, 766, 1055, 1448, 1832, 2138, 2266 |
| TaiI | ACGT | 1 cut(s) | 591 |
| TaqI | TCGA | 7 cut(s) | 44, 215, 482, 1187, 1768, 1788, 2314 |
| TatI | WGTACW | 2 cut(s) | 1583, 2133 |
| TfiI | GAWTC | 7 cut(s) | 377, 830, 1418, 1706, 2165, 2282, 2339 |
| Tru1I | TTAA | 7 cut(s) | 354, 360, 824, 1005, 1263, 1611, 2370 |
| Tru9I | TTAA | 7 cut(s) | 354, 360, 824, 1005, 1263, 1611, 2370 |
| TscAI | CASTG | 6 cut(s) | 63, 1375, 1401, 1835, 2143, 2271 |
| TseFI | GTSAC | 2 cut(s) | 286, 1173 |
| TseI | GCWGC | 6 cut(s) | 112, 499, 1423, 2105, 2468, 2471 |
| Tsp45I | GTSAC | 2 cut(s) | 286, 1173 |
| TspDTI | ATGAA | 8 cut(s) | 471, 594, 1023, 1170, 1335, 1458, 1877, 2286 |
| TspGWI | ACGGA | 1 cut(s) | 1631 |
| TspRI | CASTG | 6 cut(s) | 63, 1375, 1401, 1835, 2143, 2271 |
| VpaK11BI | GGWCC | 3 cut(s) | 637, 663, 1925 |
| XbaI | TCTAGA | 1 cut(s) | 2048 |
| XceI | RCATGY | 2 cut(s) | 1693, 1808 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1665 |
| XhoI | CTCGAG | 2 cut(s) | 481, 1767 |
| XmiI | GTMKAC | 1 cut(s) | 53 |
| XmnI | GAANNNNTTC | 3 cut(s) | 322, 716, 854 |
| XspI | CTAG | 2 cut(s) | 1796, 2049 |
| Zsp2I | ATGCAT | 2 cut(s) | 142, 1080 |