Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010118

Physical Location & Seq

Genomic Coordinates Forward (+)

22190490 .. 22192476

Gene Structure 1987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0154600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGGCTAAGCCTATAGCTCTCGCCTTTTCTCTTTGCTTGCTTGTCCTCTTCCACAGCTGCTTAGCAGCTCGCCAACAATCTCAGTCAAGCCAGCAGAACGAGTGCCAGCTAGATCAGCTCCAAGCTCGCGAACCTGATAACCGCATTGAGACTGAAGCGGGTAGGATCGAGTCTTGGGACTACAACCGCGACGACTTCCAGTGCGCTGGTGTTGCTGTTCAACGAATCACCATTGAAAGAAATGGCCTTCACTTGCCTTCTTACACCCACGCTCCACAACTCATTTACATAGTCCAAGGAAGTGGTTTTCTATCTACTGTATTTCCTGGCTGTCCTGAGACTTTCGAAGAATCTGAACAATCTGATGAAGAACAACAAGGGCAAGGGCAGCAGGGGCGCCATGGACAGCAAGGCCGTGGACAACGGGGTCAACAAGAACAAGAAGAGGAAGAACAACGACAACGCCAACGCCAACGCCAACGTCAACAGGGACAACAAGGCCATGGACAGCATGATAGACAACAAGGACAGCAAGGCCAACGGGGACAAGAGAGCTTCGAACAGCTAGACAGACACCAGAAGGTTCGACGCATAAAAGAAGGTGATATTGTTGCTATTCCTGCCGGAGTCACCTACTGGTCCTACAATGACGGTGACCAACCTCTAGTTGCTGTCAGTCTTCTTGACATCAGCAACAACCAAAACCAGCTTGATCGTAACCCGAGGAGATTCTATCTTGCTGGTAACCCACAAGATGAGTTTAACCAACAAGGGCAAAGCCAGAGTCGAAGGGGCCAGCAAGGACGTGGACAACAAGGGCAAGGCCAAAGTCAATGGGACCAGGACCAGCAACAGCAACAGCAAGGAGGAAGGAGCAGGCACCAGCAACAACAGCATGGAAACAACAACAACATCTTCGCTGGCTTCAACACACAGCTCCTCGCTGACGCTCTGAACATCGACCAACAGACTGCGCAGCAGCTTCAGGGACAAAACGACAACAGACCCCAAATCGTCAGAGTTAGAGGACGTCTTGATTTTATCCAGCCGCCACAGTCACAACAGGAGGAAAGACAAGAACAGGGAATTCAGAGACAACAGGGACAGAATGGTCTTGAGGAAACTCTCTGCAACTGGAAGATCAGAGAGAATATTGGCAGGCCTTCACGTGCTGACGTCTTCAGTCCCCAAGCCGGTCGCATCAGCACCCTCAACAGCTTTAAGTTGCCTATTCTCAGGTACCTTGACCTCAGCGCTGAGAGAGGCTTCTTCTACAATAATGCTATCTACAGCCCACACTGGAACTTGAACGCCCACGAAGTGTACTACGTCATTCGAGGTAGCGCTAGGGTTCAGGTTGTGAACGACAACGGCCAGGCCATCTTGGACAACGAAGTCCGCCAGGGACAGCTCTTCATTGTGCCACAGAACCACGCAGTGTTACAAAAGGCTAGCAACAACGGCTACGAGTACATTGCCTTCAAGACCCAGGACAATGCCAAGATTAACACTCTGGCTGGCCGGACCTCAGTCCTGCGGGCACTCCCCGACGTCGTCCTTGCTAACGCATACCAGATTGACCGACAACAGGCAAGGAATCTCAAATACAACAGACAGGAGACTGTTGCTTTGAGCTCTTCAAGGTCTTCCCAATCCCAGAGGAGCTGGTGGGCTATTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDDEXK_6

Protein Analysis

560

Amino Acids

63.99

Weight (kDa)

7.21

Isoelectric Point (pI)

63.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 250	1.8e-25	Cupin
Cupin_1	PF00190	384 - 531	3e-40	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07350
fragaria_vesca	FvH4_2g18090
malus_domestica	MD00G1206900.v1.1 MD05G1165600.v1.1 MD07G1000200.v1.1 MD07G1287900.v1.1 MD10G1156000.v1.1
prunus_persica	Prupe.8G193800_v2.0.a1
pyrus_communis	pycom05g15430 pycom10g13420
rosa_chinensis	RchiOBHm_Chr6g0283481
rosa_laevigata	RLG00000012822
rosa_multiflora	Rmu_co8471259.1_g000001 Rmu_sc0004959.1_g000011
rosa_roxburghii	Rroxscaffold_7G00185490
rosa_rugosa	Rorug06G0154600
rosa_samantha	Rh6AG267000 Rh6BG269600 Rh6CG269400 Rh6DG262800
rosa_wichuraiana	Rw6G023110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	426, 1110, 1394
AatII	GACGTC	3 cut(s)	1033, 1179, 1554
Acc16I	TGCGCA	1 cut(s)	975
Acc65I	GGTACC	1 cut(s)	1239
AccB1I	GGYRCC	3 cut(s)	396, 879, 1239
AccII	CGCG	2 cut(s)	129, 189
AciI	CCGC	6 cut(s)	142, 158, 187, 1049, 1399, 1537
AclWI	GGATC	1 cut(s)	173
AcoI	YGGCCR	2 cut(s)	1372, 1519
AcsI	RAATTY	1 cut(s)	1086
AcuI	CTGAAG	3 cut(s)	174, 968, 1165
AcvI	CACGTG	1 cut(s)	1169
AcyI	GRCGYC	4 cut(s)	397, 1030, 1176, 1551
AdeI	CACNNNGTG	2 cut(s)	1321, 1438
AfaI	GTAC	3 cut(s)	1241, 1325, 1472
AfeI	AGCGCT	2 cut(s)	1255, 1345
AfiI	CCNNNNNNNGG	2 cut(s)	1193, 1588
AgsI	TTSAA	6 cut(s)	221, 236, 928, 1309, 1483, 1641
AjiI	CACGTC	1 cut(s)	806
AjnI	CCWGG	5 cut(s)	325, 840, 1374, 1401, 1488
Alw21I	GWGCWC	1 cut(s)	1637
Alw26I	GTCTC	4 cut(s)	143, 332, 1087, 1613
AlwI	GGATC	1 cut(s)	173
Ama87I	CYCGRG	1 cut(s)	721
Aor51HI	AGCGCT	2 cut(s)	1255, 1345
ApeKI	GCWGC	5 cut(s)	57, 65, 388, 976, 979
ApoI	RAATTY	1 cut(s)	1086
ArsI	GACNNNNNNTTYG	4 cut(s)	769, 801, 1612, 1644
Asp718I	GGTACC	1 cut(s)	1239
AspLEI	GCGC	5 cut(s)	206, 399, 976, 1256, 1346
AspS9I	GGNCC	5 cut(s)	639, 793, 838, 844, 1524
AsuHPI	GGTGA	4 cut(s)	220, 614, 622, 665
AsuII	TTCGAA	2 cut(s)	345, 558
AsuNHI	GCTAGC	1 cut(s)	1451
AvaI	CYCGRG	1 cut(s)	721
AvaII	GGWCC	4 cut(s)	639, 838, 844, 1524
BaeGI	GKGCMC	1 cut(s)	1543
BanI	GGYRCC	3 cut(s)	396, 879, 1239
BanII	GRGCYC	1 cut(s)	1637
BarI	GAAGNNNNNNTAC	2 cut(s)	1463, 1495
BbrPI	CACGTG	1 cut(s)	1169
BbsI	GAAGAC	3 cut(s)	671, 1171, 1638
Bbv12I	GWGCWC	1 cut(s)	1637
BbvCI	CCTCAGC	1 cut(s)	1250
BbvI	GCAGC	5 cut(s)	44, 77, 400, 988, 991
BccI	CCATC	1 cut(s)	1388
BceAI	ACGGC	3 cut(s)	399, 1387, 1477
BcgI	CGANNNNNNTGC	2 cut(s)	1457, 1491
BciT130I	CCWGG	5 cut(s)	327, 842, 1376, 1403, 1490
BcoDI	GTCTC	4 cut(s)	143, 332, 1087, 1613
BfaI	CTAG	5 cut(s)	110, 566, 665, 1347, 1452
BfmI	CTRYAG	2 cut(s)	12, 1288
BfoI	RGCGCY	3 cut(s)	400, 1257, 1347
BisI	GCNGC	6 cut(s)	58, 66, 389, 977, 980, 1049
BlpI	GCTNAGC	2 cut(s)	6, 61
BlsI	GCNGC	6 cut(s)	59, 67, 390, 978, 981, 1050
Bme1390I	CCNGG	5 cut(s)	327, 842, 1376, 1403, 1490
Bme18I	GGWCC	4 cut(s)	639, 838, 844, 1524
BmeT110I	CYCGRG	1 cut(s)	721
BmgBI	CACGTC	1 cut(s)	806
BmgT120I	GGNCC	5 cut(s)	639, 793, 838, 844, 1524
BmiI	GGNNCC	5 cut(s)	398, 794, 839, 881, 1241
BmrFI	CCNGG	5 cut(s)	327, 842, 1376, 1403, 1490
BmsI	GCATC	1 cut(s)	1209
BmtI	GCTAGC	1 cut(s)	1455
BoxI	GACNNNNGTC	1 cut(s)	1529
BpiI	GAAGAC	3 cut(s)	671, 1171, 1638
Bpu10I	CCTNAGC	1 cut(s)	1250
Bpu1102I	GCTNAGC	2 cut(s)	6, 61
Bpu14I	TTCGAA	2 cut(s)	345, 558
BpuEI	CTTGAG	1 cut(s)	1136
BsaAI	YACGTR	1 cut(s)	1169
BsaHI	GRCGYC	4 cut(s)	397, 1030, 1176, 1551
BsaJI	CCNNGG	7 cut(s)	295, 400, 415, 502, 722, 1402, 1488
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	2 cut(s)	1193, 1588
Bse118I	RCCGGY	1 cut(s)	1193
Bse1I	ACTGG	4 cut(s)	199, 641, 1139, 1304
Bse3DI	GCAATG	1 cut(s)	1473
BseBI	CCWGG	5 cut(s)	327, 842, 1376, 1403, 1490
BseDI	CCNNGG	7 cut(s)	295, 400, 415, 502, 722, 1402, 1488
BseLI	CCNNNNNNNGG	2 cut(s)	1193, 1588
BseMI	GCAATG	1 cut(s)	1473
BseMII	CTCAG	6 cut(s)	95, 327, 1248, 1249, 1264, 1542
BseNI	ACTGG	4 cut(s)	199, 641, 1139, 1304
BseRI	GAGGAG	3 cut(s)	739, 929, 1675
BseSI	GKGCMC	1 cut(s)	1543
BseXI	GCAGC	5 cut(s)	44, 77, 400, 988, 991
Bsh1236I	CGCG	2 cut(s)	129, 189
Bsh1285I	CGRYCG	1 cut(s)	1198
BshNI	GGYRCC	3 cut(s)	396, 879, 1239
BsiEI	CGRYCG	1 cut(s)	1198
BsiHKAI	GWGCWC	1 cut(s)	1637
BsiHKCI	CYCGRG	1 cut(s)	721
BsiSI	CCGG	3 cut(s)	624, 1194, 1522
BslFI	GGGAC	8 cut(s)	191, 504, 558, 851, 1002, 1116, 1170, 1419
BslI	CCNNNNNNNGG	2 cut(s)	1193, 1588
BsmAI	GTCTC	4 cut(s)	143, 332, 1087, 1613
BsmFI	GGGAC	8 cut(s)	191, 504, 558, 851, 1002, 1116, 1170, 1419
BsoBI	CYCGRG	1 cut(s)	721
Bsp119I	TTCGAA	2 cut(s)	345, 558
Bsp1286I	GDGCHC	2 cut(s)	1543, 1637
Bsp143I	GATC	4 cut(s)	112, 165, 712, 1140
Bsp1720I	GCTNAGC	2 cut(s)	6, 61
Bsp19I	CCATGG	2 cut(s)	400, 502
Bsp68I	TCGCGA	1 cut(s)	129
BspACI	CCGC	6 cut(s)	142, 158, 187, 1049, 1399, 1537
BspCNI	CTCAG	6 cut(s)	94, 328, 1248, 1249, 1263, 1541
BspFNI	CGCG	2 cut(s)	129, 189
BspLI	GGNNCC	5 cut(s)	398, 794, 839, 881, 1241
BspOI	GCTAGC	1 cut(s)	1455
BspPI	GGATC	1 cut(s)	173
BspQI	GCTCTTC	2 cut(s)	1418, 1642
BspT104I	TTCGAA	2 cut(s)	345, 558
BspT107I	GGYRCC	3 cut(s)	396, 879, 1239
BsrDI	GCAATG	1 cut(s)	1473
BsrFI	RCCGGY	1 cut(s)	1193
BsrI	ACTGG	4 cut(s)	199, 641, 1139, 1304
BssAI	RCCGGY	1 cut(s)	1193
BssECI	CCNNGG	7 cut(s)	295, 400, 415, 502, 722, 1402, 1488
BssMI	GATC	4 cut(s)	112, 165, 712, 1140
BssNI	GRCGYC	4 cut(s)	397, 1030, 1176, 1551
BssT1I	CCWWGG	3 cut(s)	295, 400, 502
Bst2UI	CCWGG	5 cut(s)	327, 842, 1376, 1403, 1490
Bst4CI	ACNGT	4 cut(s)	319, 653, 1056, 1624
Bst6I	CTCTTC	4 cut(s)	53, 438, 1418, 1642
BstACI	GRCGYC	4 cut(s)	397, 1030, 1176, 1551
BstBAI	YACGTR	1 cut(s)	1169
BstBI	TTCGAA	2 cut(s)	345, 558
BstDEI	CTNAG	8 cut(s)	6, 61, 81, 336, 1235, 1250, 1257, 1528
BstDSI	CCRYGG	3 cut(s)	400, 415, 502
BstEII	GGTNACC	2 cut(s)	653, 743
BstFNI	CGCG	2 cut(s)	129, 189
BstH2I	RGCGCY	3 cut(s)	400, 1257, 1347
BstHHI	GCGC	5 cut(s)	206, 399, 976, 1256, 1346
BstKTI	GATC	4 cut(s)	115, 168, 715, 1143
BstMAI	GTCTC	4 cut(s)	143, 332, 1087, 1613
BstMBI	GATC	4 cut(s)	112, 165, 712, 1140
BstMCI	CGRYCG	1 cut(s)	1198
BstMWI	GCNNNNNNNGC	7 cut(s)	115, 212, 388, 394, 620, 892, 1461
BstNI	CCWGG	5 cut(s)	327, 842, 1376, 1403, 1490
BstPAI	GACNNNNGTC	1 cut(s)	1529
BstPI	GGTNACC	2 cut(s)	653, 743
BstSCI	CCNGG	5 cut(s)	325, 840, 1374, 1401, 1488
BstSFI	CTRYAG	2 cut(s)	12, 1288
BstSLI	GKGCMC	1 cut(s)	1543
BstUI	CGCG	2 cut(s)	129, 189
BstV1I	GCAGC	5 cut(s)	44, 77, 400, 988, 991
BstV2I	GAAGAC	3 cut(s)	671, 1171, 1638
BstXI	CCANNNNNNTGG	2 cut(s)	206, 302
BtgI	CCRYGG	3 cut(s)	400, 415, 502
BtrI	CACGTC	1 cut(s)	806
BtsI	GCAGTG	1 cut(s)	1443
BtsIMutI	CAGTG	3 cut(s)	206, 1297, 1443
BtuMI	TCGCGA	1 cut(s)	129
CfoI	GCGC	5 cut(s)	206, 399, 976, 1256, 1346
Cfr10I	RCCGGY	1 cut(s)	1193
Cfr13I	GGNCC	5 cut(s)	639, 793, 838, 844, 1524
CseI	GACGC	2 cut(s)	597, 956
Csp6I	GTAC	3 cut(s)	1240, 1324, 1471
CviAII	CATG	4 cut(s)	401, 503, 512, 896
CviQI	GTAC	3 cut(s)	1240, 1324, 1471
DdeI	CTNAG	8 cut(s)	6, 61, 81, 336, 1235, 1250, 1257, 1528
DinI	GGCGCC	1 cut(s)	398
DpnI	GATC	4 cut(s)	114, 167, 714, 1142
DpnII	GATC	4 cut(s)	112, 165, 712, 1140
DraIII	CACNNNGTG	2 cut(s)	1321, 1438
DrdI	GACNNNNNNGTC	3 cut(s)	426, 1110, 1394
DseDI	GACNNNNNNGTC	3 cut(s)	426, 1110, 1394
EaeI	YGGCCR	2 cut(s)	1372, 1519
Eam1104I	CTCTTC	4 cut(s)	53, 438, 1418, 1642
EarI	CTCTTC	4 cut(s)	53, 438, 1418, 1642
EciI	GGCGGA	1 cut(s)	1388
Ecl136II	GAGCTC	1 cut(s)	1635
Eco130I	CCWWGG	3 cut(s)	295, 400, 502
Eco147I	AGGCCT	1 cut(s)	1162
Eco24I	GRGCYC	1 cut(s)	1637
Eco47I	GGWCC	4 cut(s)	639, 838, 844, 1524
Eco47III	AGCGCT	2 cut(s)	1255, 1345
Eco53kI	GAGCTC	1 cut(s)	1635
Eco57I	CTGAAG	3 cut(s)	174, 968, 1165
Eco72I	CACGTG	1 cut(s)	1169
Eco88I	CYCGRG	1 cut(s)	721
Eco91I	GGTNACC	2 cut(s)	653, 743
EcoICRI	GAGCTC	1 cut(s)	1635
EcoO65I	GGTNACC	2 cut(s)	653, 743
EcoRI	GAATTC	1 cut(s)	1086
EcoRII	CCWGG	5 cut(s)	325, 840, 1374, 1401, 1488
EcoT14I	CCWWGG	3 cut(s)	295, 400, 502
EcoT38I	GRGCYC	1 cut(s)	1637
EgeI	GGCGCC	1 cut(s)	398
EheI	GGCGCC	1 cut(s)	398
ErhI	CCWWGG	3 cut(s)	295, 400, 502
FaeI	CATG	4 cut(s)	404, 506, 515, 899
FaiI	YATR	8 cut(s)	14, 290, 402, 504, 513, 593, 897, 1570
FaqI	GGGAC	8 cut(s)	191, 504, 558, 851, 1002, 1116, 1170, 1419
FatI	CATG	4 cut(s)	400, 502, 511, 895
FauI	CCCGC	2 cut(s)	151, 1530
Fnu4HI	GCNGC	6 cut(s)	58, 66, 389, 977, 980, 1049
FriOI	GRGCYC	1 cut(s)	1637
Fsp4HI	GCNGC	6 cut(s)	58, 66, 389, 977, 980, 1049
FspBI	CTAG	5 cut(s)	110, 566, 665, 1347, 1452
FspI	TGCGCA	1 cut(s)	975
GlaI	GCGC	5 cut(s)	205, 398, 975, 1255, 1345
GluI	GCNGC	6 cut(s)	58, 66, 389, 977, 980, 1049
HaeII	RGCGCY	3 cut(s)	400, 1257, 1347
HapII	CCGG	3 cut(s)	624, 1194, 1522
HgaI	GACGC	2 cut(s)	597, 956
HhaI	GCGC	5 cut(s)	206, 399, 976, 1256, 1346
Hin1I	GRCGYC	4 cut(s)	397, 1030, 1176, 1551
Hin1II	CATG	4 cut(s)	404, 506, 515, 899
Hin6I	GCGC	5 cut(s)	204, 397, 974, 1254, 1344
HinP1I	GCGC	5 cut(s)	204, 397, 974, 1254, 1344
HincII	GTYRAC	2 cut(s)	431, 485
HindII	GTYRAC	2 cut(s)	431, 485
HinfI	GANTC	7 cut(s)	170, 225, 350, 627, 729, 784, 1597
HpaII	CCGG	3 cut(s)	624, 1194, 1522
HphI	GGTGA	4 cut(s)	220, 614, 622, 665
Hpy166II	GTNNAC	6 cut(s)	419, 431, 485, 809, 1324, 1363
Hpy188I	TCNGA	6 cut(s)	355, 364, 954, 1019, 1092, 1145
Hpy188III	TCNNGA	6 cut(s)	128, 335, 683, 1034, 1115, 1483
Hpy8I	GTNNAC	6 cut(s)	419, 431, 485, 809, 1324, 1363
Hpy99I	CGWCG	4 cut(s)	194, 591, 1553, 1556
HpyAV	CCTTC	8 cut(s)	257, 267, 574, 593, 783, 864, 1173, 1489
HpyCH4III	ACNGT	4 cut(s)	319, 653, 1056, 1624
HpyCH4IV	ACGT	7 cut(s)	481, 805, 1030, 1168, 1176, 1329, 1551
HpyCH4V	TGCA	1 cut(s)	1131
HpyF10VI	GCNNNNNNNGC	7 cut(s)	115, 212, 388, 394, 620, 892, 1461
HpyF3I	CTNAG	8 cut(s)	6, 61, 81, 336, 1235, 1250, 1257, 1528
HpySE526I	ACGT	7 cut(s)	481, 805, 1030, 1168, 1176, 1329, 1551
Hsp92I	GRCGYC	4 cut(s)	397, 1030, 1176, 1551
Hsp92II	CATG	4 cut(s)	404, 506, 515, 899
HspAI	GCGC	5 cut(s)	204, 397, 974, 1254, 1344
KasI	GGCGCC	1 cut(s)	396
KpnI	GGTACC	1 cut(s)	1243
Kzo9I	GATC	4 cut(s)	112, 165, 712, 1140
LguI	GCTCTTC	2 cut(s)	1418, 1642
LmnI	GCTCC	5 cut(s)	123, 277, 873, 942, 1662
Lsp1109I	GCAGC	5 cut(s)	44, 77, 400, 988, 991
LweI	GCATC	1 cut(s)	1209
MaeI	CTAG	5 cut(s)	110, 566, 665, 1347, 1452
MaeII	ACGT	7 cut(s)	481, 805, 1030, 1168, 1176, 1329, 1551
MaeIII	GTNAC	6 cut(s)	628, 653, 716, 743, 1056, 1440
MalI	GATC	4 cut(s)	114, 167, 714, 1142
MboI	GATC	4 cut(s)	112, 165, 712, 1140
MhlI	GDGCHC	2 cut(s)	1543, 1637
MluCI	AATT	1 cut(s)	1086
Mly113I	GGCGCC	1 cut(s)	397
MlyI	GAGTC	3 cut(s)	179, 636, 793
MseI	TTAA	3 cut(s)	762, 1221, 1506
MspA1I	CMGCKG	1 cut(s)	57
MspI	CCGG	3 cut(s)	624, 1194, 1522
MspR9I	CCNGG	5 cut(s)	327, 842, 1376, 1403, 1490
MvaI	CCWGG	5 cut(s)	327, 842, 1376, 1403, 1490
MvnI	CGCG	2 cut(s)	129, 189
MwoI	GCNNNNNNNGC	7 cut(s)	115, 212, 388, 394, 620, 892, 1461
NarI	GGCGCC	1 cut(s)	397
NcoI	CCATGG	2 cut(s)	400, 502
NdeII	GATC	4 cut(s)	112, 165, 712, 1140
NheI	GCTAGC	1 cut(s)	1451
NlaIII	CATG	4 cut(s)	404, 506, 515, 899
NlaIV	GGNNCC	5 cut(s)	398, 794, 839, 881, 1241
NmuCI	GTSAC	3 cut(s)	628, 653, 1056
NruI	TCGCGA	1 cut(s)	129
NsbI	TGCGCA	1 cut(s)	975
NspV	TTCGAA	2 cut(s)	345, 558
PceI	AGGCCT	1 cut(s)	1162
PciSI	GCTCTTC	2 cut(s)	1418, 1642
PfeI	GAWTC	4 cut(s)	225, 350, 729, 1597
PflFI	GACNNNGTC	1 cut(s)	1553
PkrI	GCNGC	6 cut(s)	59, 67, 390, 978, 981, 1050
PleI	GAGTC	3 cut(s)	178, 635, 792
PluTI	GGCGCC	1 cut(s)	400
PmaCI	CACGTG	1 cut(s)	1169
PmlI	CACGTG	1 cut(s)	1169
PpsI	GAGTC	3 cut(s)	178, 635, 792
Ppu21I	YACGTR	1 cut(s)	1169
PshAI	GACNNNNGTC	1 cut(s)	1529
Psp124BI	GAGCTC	1 cut(s)	1637
Psp6I	CCWGG	5 cut(s)	325, 840, 1374, 1401, 1488
PspCI	CACGTG	1 cut(s)	1169
PspEI	GGTNACC	2 cut(s)	653, 743
PspGI	CCWGG	5 cut(s)	325, 840, 1374, 1401, 1488
PspN4I	GGNNCC	5 cut(s)	398, 794, 839, 881, 1241
PspPI	GGNCC	5 cut(s)	639, 793, 838, 844, 1524
PsyI	GACNNNGTC	1 cut(s)	1553
PvuII	CAGCTG	1 cut(s)	57
RruI	TCGCGA	1 cut(s)	129
RsaI	GTAC	3 cut(s)	1241, 1325, 1472
RsaNI	GTAC	3 cut(s)	1240, 1324, 1471
SacI	GAGCTC	1 cut(s)	1637
SapI	GCTCTTC	2 cut(s)	1418, 1642
SaqAI	TTAA	3 cut(s)	762, 1221, 1506
SatI	GCNGC	6 cut(s)	58, 66, 389, 977, 980, 1049
Sau3AI	GATC	4 cut(s)	112, 165, 712, 1140
Sau96I	GGNCC	5 cut(s)	639, 793, 838, 844, 1524
SchI	GAGTC	3 cut(s)	179, 636, 793
ScrFI	CCNGG	5 cut(s)	327, 842, 1376, 1403, 1490
SduI	GDGCHC	2 cut(s)	1543, 1637
SfaNI	GCATC	1 cut(s)	1209
SfcI	CTRYAG	2 cut(s)	12, 1288
SfoI	GGCGCC	1 cut(s)	398
SfuI	TTCGAA	2 cut(s)	345, 558
SinI	GGWCC	4 cut(s)	639, 838, 844, 1524
SmlI	CTYRAG	1 cut(s)	1115
SmoI	CTYRAG	1 cut(s)	1115
Sse9I	AATT	1 cut(s)	1086
SseBI	AGGCCT	1 cut(s)	1162
SsiI	CCGC	6 cut(s)	142, 158, 187, 1049, 1399, 1537
SspDI	GGCGCC	1 cut(s)	396
SspI	AATATT	1 cut(s)	1153
SspMI	CTAG	5 cut(s)	110, 566, 665, 1347, 1452
SstI	GAGCTC	1 cut(s)	1637
StuI	AGGCCT	1 cut(s)	1162
StyD4I	CCNGG	5 cut(s)	325, 840, 1374, 1401, 1488
StyI	CCWWGG	3 cut(s)	295, 400, 502
TaaI	ACNGT	4 cut(s)	319, 653, 1056, 1624
TaiI	ACGT	7 cut(s)	484, 808, 1033, 1171, 1179, 1332, 1554
TaqI	TCGA	7 cut(s)	168, 345, 558, 586, 787, 960, 1336
TaqII	GACCGA	1 cut(s)	1596
TasI	AATT	1 cut(s)	1086
TatI	WGTACW	2 cut(s)	1323, 1470
TauI	GCSGC	1 cut(s)	1051
TfiI	GAWTC	4 cut(s)	225, 350, 729, 1597
Tru1I	TTAA	3 cut(s)	762, 1221, 1506
Tru9I	TTAA	3 cut(s)	762, 1221, 1506
TscAI	CASTG	3 cut(s)	206, 1304, 1443
TseFI	GTSAC	3 cut(s)	628, 653, 1056
TseI	GCWGC	5 cut(s)	57, 65, 388, 976, 979
Tsp45I	GTSAC	3 cut(s)	628, 653, 1056
TspDTI	ATGAA	2 cut(s)	381, 1405
TspRI	CASTG	3 cut(s)	206, 1304, 1443
Tth111I	GACNNNGTC	1 cut(s)	1553
VpaK11BI	GGWCC	4 cut(s)	639, 838, 844, 1524
XapI	RAATTY	1 cut(s)	1086
XcmI	CCANNNNNNNNNTGG	1 cut(s)	803
XspI	CTAG	5 cut(s)	110, 566, 665, 1347, 1452
ZraI	GACGTC	3 cut(s)	1031, 1177, 1552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.