Rorug06G0189500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0010626
Physical Location & Seq
Reverse (-)
30409950 .. 30413751
3802 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0189500.1

Sequence Viewer

Length: 1776 bp
ATGGTCTCAGGAGACGACTTGGCGTCCGCCTTCTGCGACGGCAACTTTTGGCAGCCGGGGTTTCGGTTCCATCCCACCGACGAGGAACTCGTCCTCTACTATCTCAAGCGGAAGATCTGTAAGAAGAGGCTCAAGCTTAACGTCATCGCCGAGACCGACGTCTATAAGTGGGACCCTGAGGAACTTCCTGGATTGTCTTTATTGAAAACTGGAGACAGGCAATGGTTCTTTTTCAGTCCGAGAGATCGGAAGTACCCTAATGGGGGGAGATCAAACAGGGCAACCAGACATGGGTATTGGAAAGCAACTGGAAAGGATCGCAACATTTCCTGTTATAACCGATCAGTTGGACTGAAGAAGACCTTAGTTTTCTATAAAGGCCGTGCACCTACTGGGGAGCGCACTGATTGGGTGATGCATGAGTATACCTTGGATGAGGAGGAGTTAAAGAGATGCCAGAATGTACAGGAATATTATGCTCTTTACAAAGTTTTCAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAGCAATATGGGGCGCCATTTAGAGAAGAAGATTGGGCTGATGATGAATGCCCGATAATAAATAGCTCTGCTGATAGGGAAATCTCAGTTGAGCAAGTTGGAGAGCTTGCTGCCAATTATAATGTGAAACCTTTTGGAGAAATTCCATTGAAGCAAGTTGAAGAGATTACTGCTAATGGTTATGTGAACGTTAACAGCGAAGTCCATTCTACAATAGATGACTTGGAGGAGTTCATGAAACAGATTGCTGATGACGCTGTGCTTGAACTGCCACAGTTTAATGATCATGTTTACACCCTATCTCAGGTTGTTAGTGAAGAAGAAACACAAAGTACTGTGGTGGATCTGTACTCCAGTGAAGTTAAATGTCCACAATCGGTTATGACTTTTGATCCTAGTGGTGAGCAAGGCAATGCACATGCATGCTTGGACTTCACACAGTCAGCTACTTCACAGATGCAACTGTACGAGGTATCTGCTTCTGACGTTCATCAACCGGAGCCTTTCACTCCCATACTACGTGAGGACTTCCTGGAGATGGATGATCTCCTGGGTCCTGAACCTACTATTTCAAACACTGGGAATTCCGGGGGTAACTTGCAGTTTGATGAGTTGGATGGATTTGACTTCCATGATGCGGCCATGTTTTTCAATGACATGGGGCCCATTGAACAAGGAACTATTTCTCATCAATTCATGAATTCAATGGAGGGTAATATTGTAAACCAGTTTGATTACCAGATACAACCAGCACCTCCAATTCAGATCAACCATCAACTGAATCAAGAGTCAACTCAGATTAACAATCAACTATGGGCACAGAATGAAAGGCAAGATCTCTATACTTCAGCAGAATCAAAGCAGGGGTCTGGACCTCAATTCAACTCAGGTGTGGTATACGATTCGTCAAATCATCCTCCACAAGCAAATCAAAATCAAAGTGGCAATGAAGCTGCCAGTGTTACTAGTCAGTTTTCTTCTGCCCTGTGGTCTTTTGTGGAGTCTATACCTACTACTCCTGCATCTGCATCGGAGAATGCCTTGGTGAGTCGGGCCTTTGAACGGATGAATAGCTTTAGCAGGATGAGAATAATTGCGAGGAGCGCAAATGTCCCTGCAGGTAATGATTCTGAAACTAAGGGATCCCGAAAGAGGGGATTCTTCTTCATTCCAGTTCTTGTGGCACTATGTGCTATTTTTTGGGTCTTGATGGCATCTCTCAGGCAATGGGGGAGATGCATCTCCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

591

Amino Acids

66.68

Weight (kDa)

4.8

Isoelectric Point (pI)

44.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 19 - 144 1e-46 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 336, 645
AatII GACGTC 1 cut(s) 162
Acc36I ACCTGC 1 cut(s) 1634
AccB1I GGYRCC 1 cut(s) 538
AccI GTMKAC 2 cut(s) 425, 1422
AciI CCGC 3 cut(s) 27, 109, 1163
AclI AACGTT 1 cut(s) 714
AclWI GGATC 5 cut(s) 324, 876, 911, 1662, 1675
AcoI YGGCCR 1 cut(s) 1164
AcsI RAATTY 3 cut(s) 666, 1108, 1225
AcuI CTGAAG 2 cut(s) 374, 1356
AcyI GRCGYC 3 cut(s) 23, 159, 539
AdeI CACNNNGTG 1 cut(s) 1715
AfaI GTAC 5 cut(s) 254, 465, 859, 875, 992
AhdI GACNNNNNGTC 1 cut(s) 22
AhlI ACTAGT 1 cut(s) 1490
AjnI CCWGG 4 cut(s) 187, 508, 1056, 1074
AluBI AGCT 6 cut(s) 136, 591, 631, 971, 1478, 1599
AluI AGCT 6 cut(s) 136, 591, 631, 971, 1478, 1599
Alw21I GWGCWC 1 cut(s) 388
Alw26I GTCTC 4 cut(s) 6, 10, 146, 207
Alw44I GTGCAC 1 cut(s) 384
AlwI GGATC 5 cut(s) 324, 876, 911, 1662, 1675
AoxI GGCC 4 cut(s) 379, 1164, 1187, 1578
ApaI GGGCCC 1 cut(s) 1191
ApaLI GTGCAC 1 cut(s) 384
ApeKI GCWGC 3 cut(s) 52, 635, 1478
ApoI RAATTY 3 cut(s) 666, 1108, 1225
ArsI GACNNNNNNTTYG 2 cut(s) 1376, 1408
Asp700I GAANNNNTTC 1 cut(s) 1207
AspLEI GCGC 3 cut(s) 402, 541, 1631
AspS9I GGNCC 8 cut(s) 172, 506, 512, 1079, 1187, 1188, 1397, 1578
AsuC2I CCSGG 2 cut(s) 57, 1114
AsuHPI GGTGA 4 cut(s) 424, 536, 938, 1582
AvaII GGWCC 5 cut(s) 172, 506, 512, 1079, 1397
AxyI CCTNAGG 1 cut(s) 177
BaeGI GKGCMC 3 cut(s) 388, 1191, 1345
BamHI GGATCC 1 cut(s) 1667
BanI GGYRCC 1 cut(s) 538
BanII GRGCYC 1 cut(s) 1191
BbsI GAAGAC 1 cut(s) 365
Bbv12I GWGCWC 1 cut(s) 388
BbvI GCAGC 3 cut(s) 64, 622, 1465
BccI CCATC 5 cut(s) 78, 1057, 1136, 1305, 1729
BceAI ACGGC 2 cut(s) 55, 366
BcgI CGANNNNNNTGC 4 cut(s) 983, 1017, 1536, 1570
BciT130I CCWGG 4 cut(s) 189, 510, 1058, 1076
BclI TGATCA 1 cut(s) 808
BcnI CCSGG 2 cut(s) 57, 1114
BcoDI GTCTC 4 cut(s) 6, 10, 146, 207
BcuI ACTAGT 1 cut(s) 1490
BfaI CTAG 2 cut(s) 921, 1491
BfmI CTRYAG 1 cut(s) 1641
BfoI RGCGCY 1 cut(s) 542
BfuAI ACCTGC 1 cut(s) 1634
BglII AGATCT 2 cut(s) 114, 1360
BisI GCNGC 4 cut(s) 53, 636, 1164, 1479
BlsI GCNGC 4 cut(s) 54, 637, 1165, 1480
BmcAI AGTACT 1 cut(s) 859
Bme1390I CCNGG 6 cut(s) 57, 189, 510, 1058, 1076, 1114
Bme18I GGWCC 5 cut(s) 172, 506, 512, 1079, 1397
BmeRI GACNNNNNGTC 1 cut(s) 22
BmgT120I GGNCC 8 cut(s) 172, 506, 512, 1079, 1187, 1188, 1397, 1578
BmiI GGNNCC 9 cut(s) 68, 173, 174, 540, 1026, 1080, 1188, 1189, 1669
BmrFI CCNGG 6 cut(s) 57, 189, 510, 1058, 1076, 1114
BmrI ACTGGG 2 cut(s) 402, 1113
BmsI GCATC 8 cut(s) 405, 443, 972, 1150, 1556, 1562, 1748, 1751
BmuI ACTGGG 2 cut(s) 402, 1113
BoxI GACNNNNGTC 1 cut(s) 158
BpiI GAAGAC 1 cut(s) 365
BpmI CTGGAG 3 cut(s) 231, 862, 1079
BpuEI CTTGAG 2 cut(s) 89, 116
BpuMI CCSGG 2 cut(s) 57, 1114
BsaAI YACGTR 1 cut(s) 1046
BsaHI GRCGYC 3 cut(s) 23, 159, 539
BsaI GGTCTC 2 cut(s) 10, 146
BsaJI CCNNGG 5 cut(s) 56, 429, 1075, 1113, 1566
BsaWI WCCGGW 1 cut(s) 1021
Bse1I ACTGG 8 cut(s) 214, 313, 397, 879, 1108, 1252, 1482, 1697
Bse21I CCTNAGG 1 cut(s) 177
Bse3DI GCAATG 4 cut(s) 227, 943, 1477, 1757
BseBI CCWGG 4 cut(s) 189, 510, 1058, 1076
BseDI CCNNGG 5 cut(s) 56, 429, 1075, 1113, 1566
BseGI GGATG 7 cut(s) 70, 439, 1072, 1147, 1438, 1596, 1614
BseMI GCAATG 4 cut(s) 227, 943, 1477, 1757
BseMII CTCAG 7 cut(s) 21, 168, 624, 842, 1334, 1425, 1759
BseNI ACTGG 8 cut(s) 214, 313, 397, 879, 1108, 1252, 1482, 1697
BseRI GAGGAG 5 cut(s) 452, 455, 767, 1639, 1759
BseSI GKGCMC 3 cut(s) 388, 1191, 1345
BseXI GCAGC 3 cut(s) 64, 622, 1465
BshFI GGCC 4 cut(s) 381, 1166, 1189, 1580
BshNI GGYRCC 1 cut(s) 538
BsiHKAI GWGCWC 1 cut(s) 388
BsiSI CCGG 3 cut(s) 56, 1022, 1113
BslFI GGGAC 2 cut(s) 185, 1622
BsmAI GTCTC 4 cut(s) 6, 10, 146, 207
BsmBI CGTCTC 1 cut(s) 6
BsmFI GGGAC 2 cut(s) 185, 1622
BsmI GAATGC 2 cut(s) 578, 1567
BsnI GGCC 4 cut(s) 381, 1166, 1189, 1580
Bso31I GGTCTC 2 cut(s) 10, 146
Bsp120I GGGCCC 1 cut(s) 1187
Bsp1286I GDGCHC 3 cut(s) 388, 1191, 1345
Bsp1407I TGTACA 1 cut(s) 463
BspACI CCGC 3 cut(s) 27, 109, 1163
BspANI GGCC 4 cut(s) 381, 1166, 1189, 1580
BspCNI CTCAG 7 cut(s) 20, 169, 623, 841, 1333, 1424, 1758
BspHI TCATGA 3 cut(s) 759, 1221, 1772
BspLI GGNNCC 9 cut(s) 68, 173, 174, 540, 1026, 1080, 1188, 1189, 1669
BspMAI CTGCAG 1 cut(s) 1645
BspMI ACCTGC 1 cut(s) 1634
BspPI GGATC 5 cut(s) 324, 876, 911, 1662, 1675
BspT107I GGYRCC 1 cut(s) 538
BspTNI GGTCTC 2 cut(s) 10, 146
BsrDI GCAATG 4 cut(s) 227, 943, 1477, 1757
BsrGI TGTACA 1 cut(s) 463
BsrI ACTGG 8 cut(s) 214, 313, 397, 879, 1108, 1252, 1482, 1697
BssECI CCNNGG 5 cut(s) 56, 429, 1075, 1113, 1566
BssNAI GTATAC 2 cut(s) 426, 1423
BssNI GRCGYC 3 cut(s) 23, 159, 539
BssT1I CCWWGG 2 cut(s) 429, 1566
Bst1107I GTATAC 2 cut(s) 426, 1423
Bst2UI CCWGG 4 cut(s) 189, 510, 1058, 1076
Bst4CI ACNGT 4 cut(s) 801, 862, 966, 990
Bst6I CTCTTC 2 cut(s) 119, 681
BstACI GRCGYC 3 cut(s) 23, 159, 539
BstAPI GCANNNNNTGC 1 cut(s) 1715
BstAUI TGTACA 1 cut(s) 463
BstBAI YACGTR 1 cut(s) 1046
BstC8I GCNNGC 2 cut(s) 633, 949
BstDEI CTNAG 9 cut(s) 7, 177, 364, 610, 828, 1320, 1411, 1662, 1745
BstENI CCTNNNNNAGG 1 cut(s) 827
BstF5I GGATG 7 cut(s) 70, 439, 1072, 1147, 1438, 1596, 1614
BstH2I RGCGCY 1 cut(s) 542
BstHHI GCGC 3 cut(s) 402, 541, 1631
BstMAI GTCTC 4 cut(s) 6, 10, 146, 207
BstMWI GCNNNNNNNGC 4 cut(s) 779, 793, 1628, 1715
BstNI CCWGG 4 cut(s) 189, 510, 1058, 1076
BstNSI RCATGY 2 cut(s) 947, 951
BstPAI GACNNNNGTC 1 cut(s) 158
BstSCI CCNGG 6 cut(s) 55, 187, 508, 1056, 1074, 1112
BstSFI CTRYAG 1 cut(s) 1641
BstSLI GKGCMC 3 cut(s) 388, 1191, 1345
BstV1I GCAGC 3 cut(s) 64, 622, 1465
BstV2I GAAGAC 1 cut(s) 365
BstX2I RGATCY 4 cut(s) 114, 868, 1360, 1667
BstYI RGATCY 4 cut(s) 114, 868, 1360, 1667
BstZ17I GTATAC 2 cut(s) 426, 1423
Bsu36I CCTNAGG 1 cut(s) 177
BsuRI GGCC 4 cut(s) 381, 1166, 1189, 1580
BtgZI GCGATG 1 cut(s) 130
BtsCI GGATG 7 cut(s) 70, 439, 1072, 1147, 1438, 1596, 1614
BtsIMutI CAGTG 4 cut(s) 402, 886, 1101, 1489
BveI ACCTGC 1 cut(s) 1634
Cac8I GCNNGC 2 cut(s) 633, 949
CciI TCATGA 3 cut(s) 759, 1221, 1772
CfoI GCGC 3 cut(s) 402, 541, 1631
Cfr13I GGNCC 8 cut(s) 172, 506, 512, 1079, 1187, 1188, 1397, 1578
CseI GACGC 2 cut(s) 12, 788
CsiI ACCWGGT 1 cut(s) 508
Csp6I GTAC 5 cut(s) 253, 464, 858, 874, 991
CspCI CAANNNNNGTGG 2 cut(s) 484, 519
CviQI GTAC 5 cut(s) 253, 464, 858, 874, 991
DdeI CTNAG 9 cut(s) 7, 177, 364, 610, 828, 1320, 1411, 1662, 1745
DinI GGCGCC 1 cut(s) 540
DraIII CACNNNGTG 1 cut(s) 1715
DriI GACNNNNNGTC 1 cut(s) 22
EaeI YGGCCR 1 cut(s) 1164
Eam1104I CTCTTC 2 cut(s) 119, 681
Eam1105I GACNNNNNGTC 1 cut(s) 22
EarI CTCTTC 2 cut(s) 119, 681
EciI GGCGGA 1 cut(s) 16
Eco130I CCWWGG 2 cut(s) 429, 1566
Eco24I GRGCYC 1 cut(s) 1191
Eco31I GGTCTC 2 cut(s) 10, 146
Eco47I GGWCC 5 cut(s) 172, 506, 512, 1079, 1397
Eco57I CTGAAG 2 cut(s) 374, 1356
Eco81I CCTNAGG 1 cut(s) 177
EcoNI CCTNNNNNAGG 1 cut(s) 827
EcoO109I RGGNCCY 3 cut(s) 172, 1079, 1187
EcoRI GAATTC 2 cut(s) 1108, 1225
EcoRII CCWGG 4 cut(s) 187, 508, 1056, 1074
EcoT14I CCWWGG 2 cut(s) 429, 1566
EcoT22I ATGCAT 3 cut(s) 420, 949, 1766
EcoT38I GRGCYC 1 cut(s) 1191
EgeI GGCGCC 1 cut(s) 540
EheI GGCGCC 1 cut(s) 540
ErhI CCWWGG 2 cut(s) 429, 1566
Esp3I CGTCTC 1 cut(s) 6
FalI AAGNNNNNCTT 2 cut(s) 347, 379
FaqI GGGAC 2 cut(s) 185, 1622
FbaI TGATCA 1 cut(s) 808
FblI GTMKAC 2 cut(s) 425, 1422
Fnu4HI GCNGC 4 cut(s) 53, 636, 1164, 1479
FokI GGATG 7 cut(s) 57, 446, 1079, 1154, 1425, 1603, 1621
FriOI GRGCYC 1 cut(s) 1191
Fsp4HI GCNGC 4 cut(s) 53, 636, 1164, 1479
FspBI CTAG 2 cut(s) 921, 1491
GlaI GCGC 3 cut(s) 401, 540, 1630
GluI GCNGC 4 cut(s) 53, 636, 1164, 1479
GsuI CTGGAG 3 cut(s) 231, 862, 1079
HaeII RGCGCY 1 cut(s) 542
HaeIII GGCC 4 cut(s) 381, 1166, 1189, 1580
HapII CCGG 3 cut(s) 56, 1022, 1113
HgaI GACGC 2 cut(s) 12, 788
HhaI GCGC 3 cut(s) 402, 541, 1631
Hin1I GRCGYC 3 cut(s) 23, 159, 539
Hin6I GCGC 3 cut(s) 400, 539, 1629
HinP1I GCGC 3 cut(s) 400, 539, 1629
HincII GTYRAC 2 cut(s) 718, 1317
HindII GTYRAC 2 cut(s) 718, 1317
HindIII AAGCTT 1 cut(s) 134
HinfI GANTC 8 cut(s) 1306, 1313, 1379, 1427, 1526, 1573, 1652, 1683
HpaI GTTAAC 1 cut(s) 718
HpaII CCGG 3 cut(s) 56, 1022, 1113
HphI GGTGA 4 cut(s) 424, 536, 938, 1582
Hpy188I TCNGA 7 cut(s) 240, 249, 1009, 1290, 1323, 1558, 1657
Hpy99I CGWCG 3 cut(s) 41, 83, 161
HpyAV CCTTC 1 cut(s) 40
HpyCH4III ACNGT 4 cut(s) 801, 862, 966, 990
HpyCH4IV ACGT 5 cut(s) 141, 159, 714, 1011, 1045
HpyF10VI GCNNNNNNNGC 4 cut(s) 779, 793, 1628, 1715
HpyF3I CTNAG 9 cut(s) 7, 177, 364, 610, 828, 1320, 1411, 1662, 1745
HpySE526I ACGT 5 cut(s) 141, 159, 714, 1011, 1045
Hsp92I GRCGYC 3 cut(s) 23, 159, 539
HspAI GCGC 3 cut(s) 400, 539, 1629
KasI GGCGCC 1 cut(s) 538
KflI GGGWCCC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 808
KspAI GTTAAC 1 cut(s) 718
LmnI GCTCC 3 cut(s) 397, 1024, 1626
Lsp1109I GCAGC 3 cut(s) 64, 622, 1465
LweI GCATC 8 cut(s) 405, 443, 972, 1150, 1556, 1562, 1748, 1751
MabI ACCWGGT 1 cut(s) 508
MaeI CTAG 2 cut(s) 921, 1491
MaeII ACGT 5 cut(s) 141, 159, 714, 1011, 1045
MaeIII GTNAC 2 cut(s) 1118, 1486
MflI RGATCY 4 cut(s) 114, 868, 1360, 1667
MhlI GDGCHC 3 cut(s) 388, 1191, 1345
MluCI AATT 8 cut(s) 640, 666, 1108, 1217, 1225, 1284, 1403, 1617
Mly113I GGCGCC 1 cut(s) 539
MlyI GAGTC 3 cut(s) 1322, 1535, 1582
MmeI TCCRAC 3 cut(s) 328, 604, 1119
Mph1103I ATGCAT 3 cut(s) 420, 949, 1766
MroXI GAANNNNTTC 1 cut(s) 1207
MseI TTAA 6 cut(s) 138, 446, 717, 804, 888, 1326
MslI CAYNNNNRTG 1 cut(s) 946
MspI CCGG 3 cut(s) 56, 1022, 1113
MspR9I CCNGG 6 cut(s) 57, 189, 510, 1058, 1076, 1114
Mva1269I GAATGC 2 cut(s) 578, 1567
MvaI CCWGG 4 cut(s) 189, 510, 1058, 1076
MwoI GCNNNNNNNGC 4 cut(s) 779, 793, 1628, 1715
NarI GGCGCC 1 cut(s) 539
NciI CCSGG 2 cut(s) 57, 1114
NlaIV GGNNCC 9 cut(s) 68, 173, 174, 540, 1026, 1080, 1188, 1189, 1669
NmeAIII GCCGAG 1 cut(s) 175
NsiI ATGCAT 3 cut(s) 420, 949, 1766
NspI RCATGY 2 cut(s) 947, 951
PaeI GCATGC 1 cut(s) 951
PagI TCATGA 3 cut(s) 759, 1221, 1772
PcsI WCGNNNNNNNCGW 4 cut(s) 87, 147, 153, 720
PctI GAATGC 2 cut(s) 578, 1567
PdmI GAANNNNTTC 1 cut(s) 1207
PfeI GAWTC 5 cut(s) 1306, 1379, 1427, 1652, 1683
PflFI GACNNNGTC 1 cut(s) 510
PfoI TCCNGGA 2 cut(s) 187, 1056
PkrI GCNGC 4 cut(s) 54, 637, 1165, 1480
PleI GAGTC 3 cut(s) 1321, 1534, 1581
PluTI GGCGCC 1 cut(s) 542
PpsI GAGTC 3 cut(s) 1321, 1534, 1581
Ppu21I YACGTR 1 cut(s) 1046
PpuMI RGGWCCY 2 cut(s) 172, 1079
PshAI GACNNNNGTC 1 cut(s) 158
PsiI TTATAA 2 cut(s) 336, 645
Psp1406I AACGTT 1 cut(s) 714
Psp5II RGGWCCY 2 cut(s) 172, 1079
Psp6I CCWGG 4 cut(s) 187, 508, 1056, 1074
PspGI CCWGG 4 cut(s) 187, 508, 1056, 1074
PspN4I GGNNCC 9 cut(s) 68, 173, 174, 540, 1026, 1080, 1188, 1189, 1669
PspOMI GGGCCC 1 cut(s) 1187
PspPI GGNCC 8 cut(s) 172, 506, 512, 1079, 1187, 1188, 1397, 1578
PspPPI RGGWCCY 2 cut(s) 172, 1079
PstI CTGCAG 1 cut(s) 1645
PsuI RGATCY 4 cut(s) 114, 868, 1360, 1667
PsyI GACNNNGTC 1 cut(s) 510
RsaI GTAC 5 cut(s) 254, 465, 859, 875, 992
RsaNI GTAC 5 cut(s) 253, 464, 858, 874, 991
RseI CAYNNNNRTG 1 cut(s) 946
SaqAI TTAA 6 cut(s) 138, 446, 717, 804, 888, 1326
SatI GCNGC 4 cut(s) 53, 636, 1164, 1479
Sau96I GGNCC 8 cut(s) 172, 506, 512, 1079, 1187, 1188, 1397, 1578
SbfI CCTGCAGG 1 cut(s) 1645
ScaI AGTACT 1 cut(s) 859
SchI GAGTC 3 cut(s) 1322, 1535, 1582
ScrFI CCNGG 6 cut(s) 57, 189, 510, 1058, 1076, 1114
SdaI CCTGCAGG 1 cut(s) 1645
SduI GDGCHC 3 cut(s) 388, 1191, 1345
SexAI ACCWGGT 1 cut(s) 508
SfaNI GCATC 8 cut(s) 405, 443, 972, 1150, 1556, 1562, 1748, 1751
SfcI CTRYAG 1 cut(s) 1641
SfoI GGCGCC 1 cut(s) 540
SinI GGWCC 5 cut(s) 172, 506, 512, 1079, 1397
SmiMI CAYNNNNRTG 1 cut(s) 946
SmlI CTYRAG 2 cut(s) 104, 131
SmoI CTYRAG 2 cut(s) 104, 131
SpeI ACTAGT 1 cut(s) 1490
SphI GCATGC 1 cut(s) 951
Sse8387I CCTGCAGG 1 cut(s) 1645
Sse9I AATT 8 cut(s) 640, 666, 1108, 1217, 1225, 1284, 1403, 1617
SsiI CCGC 3 cut(s) 27, 109, 1163
SspDI GGCGCC 1 cut(s) 538
SspI AATATT 2 cut(s) 473, 1243
SspMI CTAG 2 cut(s) 921, 1491
StyD4I CCNGG 6 cut(s) 55, 187, 508, 1056, 1074, 1112
StyI CCWWGG 2 cut(s) 429, 1566
TaaI ACNGT 4 cut(s) 801, 862, 966, 990
TaiI ACGT 5 cut(s) 144, 162, 717, 1014, 1048
TaqII GACCGA 1 cut(s) 170
TasI AATT 8 cut(s) 640, 666, 1108, 1217, 1225, 1284, 1403, 1617
TatI WGTACW 3 cut(s) 463, 857, 873
TauI GCSGC 1 cut(s) 1166
TfiI GAWTC 5 cut(s) 1306, 1379, 1427, 1652, 1683
Tru1I TTAA 6 cut(s) 138, 446, 717, 804, 888, 1326
Tru9I TTAA 6 cut(s) 138, 446, 717, 804, 888, 1326
TscAI CASTG 4 cut(s) 409, 886, 1108, 1489
TseI GCWGC 3 cut(s) 52, 635, 1478
TspGWI ACGGA 1 cut(s) 1603
TspRI CASTG 4 cut(s) 409, 886, 1108, 1489
Tth111I GACNNNGTC 1 cut(s) 510
VneI GTGCAC 1 cut(s) 384
VpaK11BI GGWCC 5 cut(s) 172, 506, 512, 1079, 1397
XagI CCTNNNNNAGG 1 cut(s) 827
XapI RAATTY 3 cut(s) 666, 1108, 1225
XceI RCATGY 2 cut(s) 947, 951
XmiI GTMKAC 2 cut(s) 425, 1422
XmnI GAANNNNTTC 1 cut(s) 1207
XspI CTAG 2 cut(s) 921, 1491
ZraI GACGTC 1 cut(s) 160
ZrmI AGTACT 1 cut(s) 859
Zsp2I ATGCAT 3 cut(s) 420, 949, 1766
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.