Rab5-interacting protein (Rab5ip)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0266321 RchiOBHm_Chr6g0287401 |
| rosa_laevigata | RLG00000012482 |
| rosa_roxburghii | Rroxscaffold_7G00180970 |
| rosa_rugosa | Rorug06G0188100 Rorug06G0189500 |
| rosa_samantha | Rh1BG003600 Rh5DG181900 Rh6AG299100 Rh6BG305800 Rh6BG305900 Rh6CG303300 Rh6CG303500 Rh6CG303700 Rh6CG304900 Rh6CG305000 Rh6CG313200 Rh6CG314300 Rh6CG314500 Rh6DG296500 Rh6DG297700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 3 cut(s) | 5, 577, 631 |
| AcsI | RAATTY | 1 cut(s) | 476 |
| AcuI | CTGAAG | 1 cut(s) | 545 |
| AfaI | GTAC | 1 cut(s) | 313 |
| AjnI | CCWGG | 1 cut(s) | 70 |
| AluBI | AGCT | 1 cut(s) | 40 |
| AluI | AGCT | 1 cut(s) | 40 |
| Alw26I | GTCTC | 3 cut(s) | 327, 372, 405 |
| ApoI | RAATTY | 1 cut(s) | 476 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 432, 477, 558 |
| AspS9I | GGNCC | 2 cut(s) | 100, 210 |
| AvaII | GGWCC | 2 cut(s) | 100, 210 |
| BbsI | GAAGAC | 1 cut(s) | 551 |
| BccI | CCATC | 1 cut(s) | 101 |
| BciT130I | CCWGG | 1 cut(s) | 72 |
| BcoDI | GTCTC | 3 cut(s) | 327, 372, 405 |
| BfaI | CTAG | 1 cut(s) | 17 |
| Bme1390I | CCNGG | 1 cut(s) | 72 |
| Bme18I | GGWCC | 2 cut(s) | 100, 210 |
| BmgT120I | GGNCC | 2 cut(s) | 100, 210 |
| BmrFI | CCNGG | 1 cut(s) | 72 |
| BmsI | GCATC | 2 cut(s) | 241, 536 |
| BpiI | GAAGAC | 1 cut(s) | 551 |
| BpmI | CTGGAG | 1 cut(s) | 206 |
| BsaJI | CCNNGG | 1 cut(s) | 70 |
| BsaWI | WCCGGW | 1 cut(s) | 60 |
| Bse1I | ACTGG | 1 cut(s) | 309 |
| BseBI | CCWGG | 1 cut(s) | 72 |
| BseDI | CCNNGG | 1 cut(s) | 70 |
| BseGI | GGATG | 2 cut(s) | 346, 379 |
| BseMII | CTCAG | 1 cut(s) | 136 |
| BseNI | ACTGG | 1 cut(s) | 309 |
| BseRI | GAGGAG | 1 cut(s) | 397 |
| BsiSI | CCGG | 1 cut(s) | 61 |
| BslFI | GGGAC | 1 cut(s) | 53 |
| BsmAI | GTCTC | 3 cut(s) | 327, 372, 405 |
| BsmFI | GGGAC | 1 cut(s) | 53 |
| BspCNI | CTCAG | 1 cut(s) | 135 |
| BsrI | ACTGG | 1 cut(s) | 309 |
| BssECI | CCNNGG | 1 cut(s) | 70 |
| Bst2UI | CCWGG | 1 cut(s) | 72 |
| Bst4CI | ACNGT | 1 cut(s) | 97 |
| BstC8I | GCNNGC | 2 cut(s) | 445, 490 |
| BstDEI | CTNAG | 4 cut(s) | 122, 175, 194, 220 |
| BstF5I | GGATG | 2 cut(s) | 346, 379 |
| BstMAI | GTCTC | 3 cut(s) | 327, 372, 405 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 608 |
| BstNI | CCWGG | 1 cut(s) | 72 |
| BstSCI | CCNGG | 1 cut(s) | 70 |
| BstV2I | GAAGAC | 1 cut(s) | 551 |
| BtsCI | GGATG | 2 cut(s) | 346, 379 |
| Cac8I | GCNNGC | 2 cut(s) | 445, 490 |
| Cfr13I | GGNCC | 2 cut(s) | 100, 210 |
| CseI | GACGC | 1 cut(s) | 608 |
| Csp6I | GTAC | 1 cut(s) | 312 |
| CviJI | RGCY | 7 cut(s) | 25, 40, 166, 443, 488, 611, 641 |
| CviKI_1 | RGCY | 7 cut(s) | 25, 40, 166, 443, 488, 611, 641 |
| CviQI | GTAC | 1 cut(s) | 312 |
| DdeI | CTNAG | 4 cut(s) | 122, 175, 194, 220 |
| Eco47I | GGWCC | 2 cut(s) | 100, 210 |
| Eco57I | CTGAAG | 1 cut(s) | 545 |
| EcoRII | CCWGG | 1 cut(s) | 70 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 534, 566, 576, 608, 588, 620 |
| FaqI | GGGAC | 1 cut(s) | 53 |
| FblI | GTMKAC | 3 cut(s) | 5, 577, 631 |
| FokI | GGATG | 2 cut(s) | 333, 366 |
| FspBI | CTAG | 1 cut(s) | 17 |
| GsuI | CTGGAG | 1 cut(s) | 206 |
| HapII | CCGG | 1 cut(s) | 61 |
| HgaI | GACGC | 1 cut(s) | 608 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HpaII | CCGG | 1 cut(s) | 61 |
| Hpy166II | GTNNAC | 3 cut(s) | 6, 578, 632 |
| Hpy188I | TCNGA | 2 cut(s) | 125, 564 |
| Hpy8I | GTNNAC | 3 cut(s) | 6, 578, 632 |
| Hpy99I | CGWCG | 5 cut(s) | 301, 355, 358, 388, 391 |
| HpyAV | CCTTC | 2 cut(s) | 340, 526 |
| HpyCH4III | ACNGT | 1 cut(s) | 97 |
| HpyCH4IV | ACGT | 6 cut(s) | 154, 296, 343, 376, 556, 574 |
| HpyCH4V | TGCA | 4 cut(s) | 51, 232, 447, 492 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 608 |
| HpyF3I | CTNAG | 4 cut(s) | 122, 175, 194, 220 |
| HpySE526I | ACGT | 6 cut(s) | 154, 296, 343, 376, 556, 574 |
| LmnI | GCTCC | 2 cut(s) | 37, 139 |
| LweI | GCATC | 2 cut(s) | 241, 536 |
| MaeI | CTAG | 1 cut(s) | 17 |
| MaeII | ACGT | 6 cut(s) | 154, 296, 343, 376, 556, 574 |
| MaeIII | GTNAC | 4 cut(s) | 292, 339, 372, 498 |
| MboII | GAAGA | 3 cut(s) | 437, 485, 551 |
| MluCI | AATT | 2 cut(s) | 86, 476 |
| MmeI | TCCRAC | 5 cut(s) | 15, 95, 117, 341, 374 |
| MnlI | CCTC | 6 cut(s) | 68, 113, 283, 418, 622, 652 |
| MroXI | GAANNNNTTC | 3 cut(s) | 432, 477, 558 |
| MseI | TTAA | 9 cut(s) | 45, 89, 132, 414, 455, 462, 507, 522, 594 |
| MspI | CCGG | 1 cut(s) | 61 |
| MspR9I | CCNGG | 1 cut(s) | 72 |
| MvaI | CCWGG | 1 cut(s) | 72 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 608 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 232, 302 |
| PdmI | GAANNNNTTC | 3 cut(s) | 432, 477, 558 |
| Psp6I | CCWGG | 1 cut(s) | 70 |
| PspGI | CCWGG | 1 cut(s) | 70 |
| PspPI | GGNCC | 2 cut(s) | 100, 210 |
| RsaI | GTAC | 1 cut(s) | 313 |
| RsaNI | GTAC | 1 cut(s) | 312 |
| SalI | GTCGAC | 1 cut(s) | 4 |
| SaqAI | TTAA | 9 cut(s) | 45, 89, 132, 414, 455, 462, 507, 522, 594 |
| Sau96I | GGNCC | 2 cut(s) | 100, 210 |
| ScrFI | CCNGG | 1 cut(s) | 72 |
| SfaNI | GCATC | 2 cut(s) | 241, 536 |
| SinI | GGWCC | 2 cut(s) | 100, 210 |
| Sse9I | AATT | 2 cut(s) | 86, 476 |
| SspMI | CTAG | 1 cut(s) | 17 |
| StyD4I | CCNGG | 1 cut(s) | 70 |
| TaaI | ACNGT | 1 cut(s) | 97 |
| TaiI | ACGT | 6 cut(s) | 157, 299, 346, 379, 559, 577 |
| TaqI | TCGA | 4 cut(s) | 5, 105, 235, 530 |
| TasI | AATT | 2 cut(s) | 86, 476 |
| TatI | WGTACW | 1 cut(s) | 311 |
| Tru1I | TTAA | 9 cut(s) | 45, 89, 132, 414, 455, 462, 507, 522, 594 |
| Tru9I | TTAA | 9 cut(s) | 45, 89, 132, 414, 455, 462, 507, 522, 594 |
| TspDTI | ATGAA | 1 cut(s) | 614 |
| TspGWI | ACGGA | 2 cut(s) | 339, 372 |
| VpaK11BI | GGWCC | 2 cut(s) | 100, 210 |
| XapI | RAATTY | 1 cut(s) | 476 |
| XmiI | GTMKAC | 3 cut(s) | 5, 577, 631 |
| XmnI | GAANNNNTTC | 3 cut(s) | 432, 477, 558 |
| XspI | CTAG | 1 cut(s) | 17 |