No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0266321 RchiOBHm_Chr6g0287401 |
| rosa_laevigata | RLG00000012482 |
| rosa_roxburghii | Rroxscaffold_7G00180970 |
| rosa_rugosa | Rorug06G0188100 Rorug06G0189500 |
| rosa_samantha | Rh1BG003600 Rh5DG181900 Rh6AG299100 Rh6BG305800 Rh6BG305900 Rh6CG303300 Rh6CG303500 Rh6CG303700 Rh6CG304900 Rh6CG305000 Rh6CG313200 Rh6CG314300 Rh6CG314500 Rh6DG296500 Rh6DG297700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 182 |
| AdeI | CACNNNGTG | 1 cut(s) | 95 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 182 |
| AgsI | TTSAA | 1 cut(s) | 15 |
| AjnI | CCWGG | 1 cut(s) | 124 |
| Alw21I | GWGCWC | 1 cut(s) | 158 |
| Alw26I | GTCTC | 2 cut(s) | 62, 203 |
| Alw44I | GTGCAC | 1 cut(s) | 154 |
| AoxI | GGCC | 1 cut(s) | 173 |
| ApaLI | GTGCAC | 1 cut(s) | 154 |
| ApeKI | GCWGC | 1 cut(s) | 192 |
| AspS9I | GGNCC | 2 cut(s) | 107, 128 |
| AsuHPI | GGTGA | 1 cut(s) | 81 |
| AvaII | GGWCC | 2 cut(s) | 107, 128 |
| BaeGI | GKGCMC | 1 cut(s) | 158 |
| BbsI | GAAGAC | 1 cut(s) | 78 |
| Bbv12I | GWGCWC | 1 cut(s) | 158 |
| BbvI | GCAGC | 1 cut(s) | 179 |
| BciT130I | CCWGG | 1 cut(s) | 126 |
| BcoDI | GTCTC | 2 cut(s) | 62, 203 |
| BisI | GCNGC | 1 cut(s) | 193 |
| BlsI | GCNGC | 1 cut(s) | 194 |
| Bme1390I | CCNGG | 1 cut(s) | 126 |
| Bme18I | GGWCC | 2 cut(s) | 107, 128 |
| BmgT120I | GGNCC | 2 cut(s) | 107, 128 |
| BmrFI | CCNGG | 1 cut(s) | 126 |
| BmsI | GCATC | 1 cut(s) | 107 |
| BoxI | GACNNNNGTC | 1 cut(s) | 126 |
| BpiI | GAAGAC | 1 cut(s) | 78 |
| BpmI | CTGGAG | 1 cut(s) | 44 |
| BsaJI | CCNNGG | 2 cut(s) | 110, 124 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 182 |
| Bse1I | ACTGG | 2 cut(s) | 54, 176 |
| BseBI | CCWGG | 1 cut(s) | 126 |
| BseDI | CCNNGG | 2 cut(s) | 110, 124 |
| BseGI | GGATG | 1 cut(s) | 122 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 182 |
| BseNI | ACTGG | 2 cut(s) | 54, 176 |
| BseSI | GKGCMC | 1 cut(s) | 158 |
| BseXI | GCAGC | 1 cut(s) | 179 |
| BseYI | CCCAGC | 1 cut(s) | 196 |
| BshFI | GGCC | 1 cut(s) | 175 |
| BsiHKAI | GWGCWC | 1 cut(s) | 158 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 182 |
| BsmAI | GTCTC | 2 cut(s) | 62, 203 |
| BsnI | GGCC | 1 cut(s) | 175 |
| Bsp1286I | GDGCHC | 1 cut(s) | 158 |
| BspANI | GGCC | 1 cut(s) | 175 |
| BsrI | ACTGG | 2 cut(s) | 54, 176 |
| BssECI | CCNNGG | 2 cut(s) | 110, 124 |
| BssT1I | CCWWGG | 1 cut(s) | 110 |
| Bst2UI | CCWGG | 1 cut(s) | 126 |
| Bst4CI | ACNGT | 1 cut(s) | 160 |
| BstDEI | CTNAG | 1 cut(s) | 37 |
| BstF5I | GGATG | 1 cut(s) | 122 |
| BstMAI | GTCTC | 2 cut(s) | 62, 203 |
| BstNI | CCWGG | 1 cut(s) | 126 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 126 |
| BstSCI | CCNGG | 1 cut(s) | 124 |
| BstSLI | GKGCMC | 1 cut(s) | 158 |
| BstV1I | GCAGC | 1 cut(s) | 179 |
| BstV2I | GAAGAC | 1 cut(s) | 78 |
| BsuRI | GGCC | 1 cut(s) | 175 |
| BtsCI | GGATG | 1 cut(s) | 122 |
| BtsIMutI | CAGTG | 1 cut(s) | 156 |
| Cfr13I | GGNCC | 2 cut(s) | 107, 128 |
| CviAII | CATG | 1 cut(s) | 132 |
| CviJI | RGCY | 1 cut(s) | 175 |
| CviKI_1 | RGCY | 1 cut(s) | 175 |
| DdeI | CTNAG | 1 cut(s) | 37 |
| DraIII | CACNNNGTG | 1 cut(s) | 95 |
| Eco130I | CCWWGG | 1 cut(s) | 110 |
| Eco47I | GGWCC | 2 cut(s) | 107, 128 |
| EcoO109I | RGGNCCY | 1 cut(s) | 107 |
| EcoRII | CCWGG | 1 cut(s) | 124 |
| EcoT14I | CCWWGG | 1 cut(s) | 110 |
| ErhI | CCWWGG | 1 cut(s) | 110 |
| FaeI | CATG | 1 cut(s) | 135 |
| FaiI | YATR | 2 cut(s) | 133, 214 |
| FatI | CATG | 1 cut(s) | 131 |
| Fnu4HI | GCNGC | 1 cut(s) | 193 |
| FokI | GGATG | 1 cut(s) | 129 |
| Fsp4HI | GCNGC | 1 cut(s) | 193 |
| GluI | GCNGC | 1 cut(s) | 193 |
| GsaI | CCCAGC | 1 cut(s) | 200 |
| GsuI | CTGGAG | 1 cut(s) | 44 |
| HaeIII | GGCC | 1 cut(s) | 175 |
| Hin1II | CATG | 1 cut(s) | 135 |
| HinfI | GANTC | 2 cut(s) | 18, 83 |
| HphI | GGTGA | 1 cut(s) | 81 |
| Hpy166II | GTNNAC | 1 cut(s) | 156 |
| Hpy188III | TCNNGA | 1 cut(s) | 15 |
| Hpy8I | GTNNAC | 1 cut(s) | 156 |
| HpyAV | CCTTC | 3 cut(s) | 32, 88, 98 |
| HpyCH4III | ACNGT | 1 cut(s) | 160 |
| HpyCH4V | TGCA | 1 cut(s) | 156 |
| HpyF3I | CTNAG | 1 cut(s) | 37 |
| Hsp92II | CATG | 1 cut(s) | 135 |
| LpnPI | CCDG | 7 cut(s) | 67, 74, 111, 138, 164, 189, 210 |
| Lsp1109I | GCAGC | 1 cut(s) | 179 |
| LweI | GCATC | 1 cut(s) | 107 |
| MboII | GAAGA | 2 cut(s) | 3, 78 |
| MhlI | GDGCHC | 1 cut(s) | 158 |
| MlyI | GAGTC | 1 cut(s) | 92 |
| MspR9I | CCNGG | 1 cut(s) | 126 |
| MvaI | CCWGG | 1 cut(s) | 126 |
| NlaIII | CATG | 1 cut(s) | 135 |
| PfeI | GAWTC | 1 cut(s) | 18 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 182 |
| PkrI | GCNGC | 1 cut(s) | 194 |
| PleI | GAGTC | 1 cut(s) | 91 |
| PpsI | GAGTC | 1 cut(s) | 91 |
| PpuMI | RGGWCCY | 1 cut(s) | 107 |
| PshAI | GACNNNNGTC | 1 cut(s) | 126 |
| Psp5II | RGGWCCY | 1 cut(s) | 107 |
| Psp6I | CCWGG | 1 cut(s) | 124 |
| PspFI | CCCAGC | 1 cut(s) | 196 |
| PspGI | CCWGG | 1 cut(s) | 124 |
| PspPI | GGNCC | 2 cut(s) | 107, 128 |
| PspPPI | RGGWCCY | 1 cut(s) | 107 |
| SatI | GCNGC | 1 cut(s) | 193 |
| Sau96I | GGNCC | 2 cut(s) | 107, 128 |
| SchI | GAGTC | 1 cut(s) | 92 |
| ScrFI | CCNGG | 1 cut(s) | 126 |
| SduI | GDGCHC | 1 cut(s) | 158 |
| SetI | ASST | 2 cut(s) | 80, 112 |
| SfaNI | GCATC | 1 cut(s) | 107 |
| SinI | GGWCC | 2 cut(s) | 107, 128 |
| StyD4I | CCNGG | 1 cut(s) | 124 |
| StyI | CCWWGG | 1 cut(s) | 110 |
| TaaI | ACNGT | 1 cut(s) | 160 |
| TaqI | TCGA | 1 cut(s) | 81 |
| TaqII | GACCGA | 1 cut(s) | 156 |
| TfiI | GAWTC | 1 cut(s) | 18 |
| TscAI | CASTG | 1 cut(s) | 163 |
| TseI | GCWGC | 1 cut(s) | 192 |
| TspDTI | ATGAA | 1 cut(s) | 117 |
| TspRI | CASTG | 1 cut(s) | 163 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 182 |
| VneI | GTGCAC | 1 cut(s) | 154 |
| VpaK11BI | GGWCC | 2 cut(s) | 107, 128 |