Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0009327

Physical Location & Seq

Genomic Coordinates Forward (+)

38052100 .. 38053440

Gene Structure 1341 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0238100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1131 bp

ATGGAAGCCCTCTTCGTCAACCAATACTCCATCTCCGGCGGCCTCAAACTCTCCCCCAACCTCACCGCCTCCTCTTTCCCTTCCCAACCCCACCTCATCATCCGCCTCAGACTCAGACTCAGACCCGCCCCCAAATCATCCATCTCCGTCATCCAAAACCAACAAAACCAATTCCTCGAAACGCAGAAACCGCTCTCATCAGACTCCTCCGACGAGTCGTACGGAGAAGTCGACAAGATAATCGGCAGCAGAGCGGTGGAGGGCGGCACCGGAATGCAGTACCTGATCCAGTGGAAAGACGGGCACGCCCCTTCCTGGGTCTCCTCCGACTCCATAGCCAAAGACGTGGTGGCCGAGTACGACAGCCCCTGGTGGACCGCCGCCAAAAAGGCCGACGACGCCGCTCTCAGGGAGCTCCTGGAAGCCGAAGACGACCGCGACGTTGACGCCGTCGACTCCGACGGCCGCACGGCTCTTCTGTTCGTCGCCGGTCTGGGATCCGAGCCGTGCGTCCGGCTGCTGGCGGAGGCCGGAGCCGACCTCGATCACAGGGACAACGTCGGCGGGTTAGCTGCCCTGCACATGGCGGCCGGGTACGTGAGGCCAGGTGTCGTGAAGCTATTGGTGGAGCTGGAGGCGGACCCGGAGGTGGAGGACGACAGAGGACGGAAGCCGTTGGATTTGGCCAAGGAGGTACTGAGCACGACTCCCAAGGGGAACCCGGTTCAGTTCGCGAGGAGGTTGGGGTTGGAGAGCGTGATTAGGGAGCTGGAGGGGGCGGTGTTCGAGTACGCCGAGGTGCACCAGTTGTTGGAGAAGAGAGGGAAGGGGGATGCCGTCGAATATTTGGTCAAATGGAAGGACGGTGGAGATAACGAGTGGGTCAACGCGCGGTTCATTGGGGAGGACTTGGTGAGGGACTTTGAGGCGGGGCTGGAGTACGCTGTGGCCGAGGGAGTGGTGGGGAAGAGAGTCGGGGACGACCGGAAGATGGAGTACTTGGTCAAATGGACGGATATAGATGAGGCCACGTGGGAGCCCGAGGAGAACGTCGACCCCGATTTGATCAAGGAGTTTGAGGACAAGGGGAGTAGTGCTAGTACTGGGACTGGGGTGCCCAATGTGGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nop16

Protein Analysis

376

Amino Acids

41.19

Weight (kDa)

4.6

Isoelectric Point (pI)

25.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	126 - 219	1.8e-11	Ankyrin repeats (3 copies)
Ank_5	PF13857	174 - 229	1.5e-06	Ankyrin repeats (many copies)
Chromo	PF00385	317 - 362	9.6e-11	Chromo (CHRromatin Organisation MOdifier) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02870
fragaria_vesca	FvH4_2g25580
malus_domestica	MD03G1286500.v1.1 MD05G1198200.v1.1 MD11G1313700.v1.1
prunus_persica	Prupe.8G259900_v2.0.a1
pyrus_communis	pycom03g22710 pycom11g27260
rosa_chinensis	RchiOBHm_Chr2g0134071 RchiOBHm_Chr6g0293791
rosa_laevigata	RLG00000011923
rosa_multiflora	Rmu_sc0001782.1_g000027
rosa_roxburghii	Rroxscaffold_7G00173900
rosa_rugosa	Rorug06G0238100
rosa_samantha	Rh2BG373700 Rh2DG390300 Rh5BG142100 Rh6AG351400 Rh6BG358300 Rh6CG365400 Rh6DG352100
rosa_wichuraiana	Rw6G030570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	266, 1114
AccB7I	CCANNNNNTGG	1 cut(s)	811
AccBSI	CCGCTC	3 cut(s)	193, 254, 404
AccI	GTMKAC	3 cut(s)	231, 453, 1053
AccII	CGCG	4 cut(s)	438, 734, 890, 892
AclWI	GGATC	3 cut(s)	280, 492, 505
AcoI	YGGCCR	5 cut(s)	351, 463, 588, 684, 948
AcvI	CACGTG	1 cut(s)	1032
AcyI	GRCGYC	2 cut(s)	399, 447
AfaI	GTAC	9 cut(s)	221, 281, 359, 596, 696, 791, 941, 998, 1102
AfiI	CCNNNNNNNGG	9 cut(s)	315, 316, 408, 520, 583, 649, 811, 991, 1124
AjiI	CACGTC	1 cut(s)	346
AjnI	CCWGG	4 cut(s)	314, 368, 417, 604
AluBI	AGCT	5 cut(s)	415, 572, 619, 631, 769
AluI	AGCT	5 cut(s)	415, 572, 619, 631, 769
Alw21I	GWGCWC	3 cut(s)	417, 704, 804
Alw26I	GTCTC	1 cut(s)	325
Alw44I	GTGCAC	1 cut(s)	800
AlwI	GGATC	3 cut(s)	280, 492, 505
AlwNI	CAGNNNCTG	2 cut(s)	283, 369
Ama87I	CYCGRG	1 cut(s)	1040
ApaLI	GTGCAC	1 cut(s)	800
ApeKI	GCWGC	3 cut(s)	246, 517, 572
ArsI	GACNNNNNNTTYG	2 cut(s)	834, 866
AspLEI	GCGC	1 cut(s)	892
AspS9I	GGNCC	2 cut(s)	375, 640
AsuC2I	CCSGG	3 cut(s)	592, 644, 722
AsuHPI	GGTGA	2 cut(s)	55, 925
AvaI	CYCGRG	1 cut(s)	1040
AvaII	GGWCC	2 cut(s)	375, 640
BaeGI	GKGCMC	3 cut(s)	306, 804, 1119
BalI	TGGCCA	1 cut(s)	686
BamHI	GGATCC	1 cut(s)	497
BanI	GGYRCC	2 cut(s)	266, 1114
BanII	GRGCYC	2 cut(s)	417, 1041
BarI	GAAGNNNNNNTAC	2 cut(s)	980, 1012
BbrPI	CACGTG	1 cut(s)	1032
BbsI	GAAGAC	1 cut(s)	435
Bbv12I	GWGCWC	3 cut(s)	417, 704, 804
BbvI	GCAGC	3 cut(s)	258, 504, 559
BccI	CCATC	3 cut(s)	38, 149, 985
BceAI	ACGGC	6 cut(s)	434, 478, 486, 490, 658, 821
BciT130I	CCWGG	4 cut(s)	316, 370, 419, 606
BclI	TGATCA	1 cut(s)	1065
BcnI	CCSGG	3 cut(s)	592, 644, 722
BcoDI	GTCTC	1 cut(s)	325
BfaI	CTAG	1 cut(s)	1098
BglI	GCCNNNNNGGC	1 cut(s)	389
BisI	GCNGC	9 cut(s)	40, 247, 265, 381, 402, 466, 518, 573, 588
BlsI	GCNGC	9 cut(s)	41, 248, 266, 382, 403, 467, 519, 574, 589
BmcAI	AGTACT	2 cut(s)	998, 1102
Bme1390I	CCNGG	7 cut(s)	316, 370, 419, 592, 606, 644, 722
Bme18I	GGWCC	2 cut(s)	375, 640
BmeT110I	CYCGRG	1 cut(s)	1040
BmgBI	CACGTC	1 cut(s)	346
BmgT120I	GGNCC	2 cut(s)	375, 640
BmiI	GGNNCC	7 cut(s)	268, 499, 535, 642, 719, 1038, 1116
BmrFI	CCNGG	7 cut(s)	316, 370, 419, 592, 606, 644, 722
BmrI	ACTGGG	2 cut(s)	1113, 1119
BmsI	GCATC	1 cut(s)	823
BmuI	ACTGGG	2 cut(s)	1113, 1119
BpiI	GAAGAC	1 cut(s)	435
BplI	GAGNNNNNCTC	4 cut(s)	525, 557, 691, 723
BpmI	CTGGAG	3 cut(s)	653, 791, 956
BpuMI	CCSGG	3 cut(s)	592, 644, 722
BsaAI	YACGTR	2 cut(s)	598, 1032
BsaHI	GRCGYC	2 cut(s)	399, 447
BsaI	GGTCTC	1 cut(s)	325
BsaJI	CCNNGG	7 cut(s)	315, 368, 687, 711, 795, 951, 1041
BsaWI	WCCGGW	2 cut(s)	269, 984
BsaXI	ACNNNNNCTCC	4 cut(s)	11, 17, 41, 47
Bsc4I	CCNNNNNNNGG	9 cut(s)	315, 316, 408, 520, 583, 649, 811, 991, 1124
Bse118I	RCCGGY	1 cut(s)	488
Bse1I	ACTGG	4 cut(s)	289, 805, 1108, 1114
BseBI	CCWGG	4 cut(s)	316, 370, 419, 606
BseDI	CCNNGG	7 cut(s)	315, 368, 687, 711, 795, 951, 1041
BseGI	GGATG	4 cut(s)	99, 137, 150, 838
BseLI	CCNNNNNNNGG	9 cut(s)	315, 316, 408, 520, 583, 649, 811, 991, 1124
BseMII	CTCAG	5 cut(s)	121, 127, 133, 421, 689
BseNI	ACTGG	4 cut(s)	289, 805, 1108, 1114
BseRI	GAGGAG	5 cut(s)	61, 196, 313, 751, 1058
BseSI	GKGCMC	3 cut(s)	306, 804, 1119
BseX3I	CGGCCG	2 cut(s)	463, 588
BseXI	GCAGC	3 cut(s)	258, 504, 559
BsgI	GTGCAG	1 cut(s)	563
Bsh1236I	CGCG	4 cut(s)	438, 734, 890, 892
Bsh1285I	CGRYCG	4 cut(s)	436, 466, 591, 985
BshNI	GGYRCC	2 cut(s)	266, 1114
BsiEI	CGRYCG	4 cut(s)	436, 466, 591, 985
BsiHKAI	GWGCWC	3 cut(s)	417, 704, 804
BsiHKCI	CYCGRG	1 cut(s)	1040
BsiSI	CCGG	9 cut(s)	36, 270, 489, 514, 531, 591, 644, 722, 985
BsiWI	CGTACG	1 cut(s)	219
BslFI	GGGAC	4 cut(s)	566, 932, 992, 1120
BslI	CCNNNNNNNGG	9 cut(s)	315, 316, 408, 520, 583, 649, 811, 991, 1124
BsmAI	GTCTC	1 cut(s)	325
BsmFI	GGGAC	4 cut(s)	566, 932, 992, 1120
BsmI	GAATGC	1 cut(s)	279
Bso31I	GGTCTC	1 cut(s)	325
BsoBI	CYCGRG	1 cut(s)	1040
Bsp1286I	GDGCHC	6 cut(s)	306, 417, 704, 804, 1041, 1119
Bsp143I	GATC	4 cut(s)	285, 497, 544, 1065
Bsp68I	TCGCGA	1 cut(s)	734
BspCNI	CTCAG	5 cut(s)	120, 126, 132, 420, 690
BspFNI	CGCG	4 cut(s)	438, 734, 890, 892
BspLI	GGNNCC	7 cut(s)	268, 499, 535, 642, 719, 1038, 1116
BspPI	GGATC	3 cut(s)	280, 492, 505
BspQI	GCTCTTC	1 cut(s)	480
BspT107I	GGYRCC	2 cut(s)	266, 1114
BspTNI	GGTCTC	1 cut(s)	325
BsrBI	CCGCTC	3 cut(s)	193, 254, 404
BsrFI	RCCGGY	1 cut(s)	488
BsrI	ACTGG	4 cut(s)	289, 805, 1108, 1114
BssAI	RCCGGY	1 cut(s)	488
BssECI	CCNNGG	7 cut(s)	315, 368, 687, 711, 795, 951, 1041
BssMI	GATC	4 cut(s)	285, 497, 544, 1065
BssNI	GRCGYC	2 cut(s)	399, 447
BssT1I	CCWWGG	2 cut(s)	687, 711
Bst2UI	CCWGG	4 cut(s)	316, 370, 419, 606
Bst4CI	ACNGT	1 cut(s)	866
Bst6I	CTCTTC	4 cut(s)	17, 480, 812, 962
BstACI	GRCGYC	2 cut(s)	399, 447
BstBAI	YACGTR	2 cut(s)	598, 1032
BstC8I	GCNNGC	2 cut(s)	306, 522
BstDEI	CTNAG	5 cut(s)	107, 113, 119, 407, 698
BstF5I	GGATG	4 cut(s)	99, 137, 150, 838
BstFNI	CGCG	4 cut(s)	438, 734, 890, 892
BstHHI	GCGC	1 cut(s)	892
BstKTI	GATC	4 cut(s)	288, 500, 547, 1068
BstMAI	GTCTC	1 cut(s)	325
BstMBI	GATC	4 cut(s)	285, 497, 544, 1065
BstMCI	CGRYCG	4 cut(s)	436, 466, 591, 985
BstMWI	GCNNNNNNNGC	3 cut(s)	190, 389, 398
BstNI	CCWGG	4 cut(s)	316, 370, 419, 606
BstSCI	CCNGG	7 cut(s)	314, 368, 417, 590, 604, 642, 720
BstSLI	GKGCMC	3 cut(s)	306, 804, 1119
BstUI	CGCG	4 cut(s)	438, 734, 890, 892
BstV1I	GCAGC	3 cut(s)	258, 504, 559
BstV2I	GAAGAC	1 cut(s)	435
BstX2I	RGATCY	1 cut(s)	497
BstXI	CCANNNNNNTGG	1 cut(s)	346
BstYI	RGATCY	1 cut(s)	497
BstZI	CGGCCG	2 cut(s)	463, 588
BtrI	CACGTC	1 cut(s)	346
BtsCI	GGATG	4 cut(s)	99, 137, 150, 838
BtsIMutI	CAGTG	1 cut(s)	296
BtuMI	TCGCGA	1 cut(s)	734
Cac8I	GCNNGC	2 cut(s)	306, 522
CaiI	CAGNNNCTG	2 cut(s)	283, 369
CfoI	GCGC	1 cut(s)	892
Cfr10I	RCCGGY	1 cut(s)	488
Cfr13I	GGNCC	2 cut(s)	375, 640
CseI	GACGC	3 cut(s)	407, 455, 499
Csp6I	GTAC	9 cut(s)	220, 280, 358, 595, 695, 790, 940, 997, 1101
CviAII	CATG	1 cut(s)	583
CviQI	GTAC	9 cut(s)	220, 280, 358, 595, 695, 790, 940, 997, 1101
DdeI	CTNAG	5 cut(s)	107, 113, 119, 407, 698
DpnI	GATC	4 cut(s)	287, 499, 546, 1067
DpnII	GATC	4 cut(s)	285, 497, 544, 1065
EaeI	YGGCCR	5 cut(s)	351, 463, 588, 684, 948
EagI	CGGCCG	2 cut(s)	463, 588
Eam1104I	CTCTTC	4 cut(s)	17, 480, 812, 962
EarI	CTCTTC	4 cut(s)	17, 480, 812, 962
EciI	GGCGGA	3 cut(s)	92, 539, 653
Ecl136II	GAGCTC	1 cut(s)	415
EclXI	CGGCCG	2 cut(s)	463, 588
Eco130I	CCWWGG	2 cut(s)	687, 711
Eco24I	GRGCYC	2 cut(s)	417, 1041
Eco31I	GGTCTC	1 cut(s)	325
Eco47I	GGWCC	2 cut(s)	375, 640
Eco52I	CGGCCG	2 cut(s)	463, 588
Eco53kI	GAGCTC	1 cut(s)	415
Eco72I	CACGTG	1 cut(s)	1032
Eco88I	CYCGRG	1 cut(s)	1040
EcoICRI	GAGCTC	1 cut(s)	415
EcoRII	CCWGG	4 cut(s)	314, 368, 417, 604
EcoT14I	CCWWGG	2 cut(s)	687, 711
EcoT38I	GRGCYC	2 cut(s)	417, 1041
ErhI	CCWWGG	2 cut(s)	687, 711
FaeI	CATG	1 cut(s)	586
FaiI	YATR	3 cut(s)	335, 584, 1019
FaqI	GGGAC	4 cut(s)	566, 932, 992, 1120
FatI	CATG	1 cut(s)	582
FauI	CCCGC	3 cut(s)	133, 557, 922
FbaI	TGATCA	1 cut(s)	1065
FblI	GTMKAC	3 cut(s)	231, 453, 1053
Fnu4HI	GCNGC	9 cut(s)	40, 247, 265, 381, 402, 466, 518, 573, 588
FokI	GGATG	4 cut(s)	86, 124, 137, 845
FriOI	GRGCYC	2 cut(s)	417, 1041
Fsp4HI	GCNGC	9 cut(s)	40, 247, 265, 381, 402, 466, 518, 573, 588
FspBI	CTAG	1 cut(s)	1098
GlaI	GCGC	1 cut(s)	891
GluI	GCNGC	9 cut(s)	40, 247, 265, 381, 402, 466, 518, 573, 588
GsuI	CTGGAG	3 cut(s)	653, 791, 956
HapII	CCGG	9 cut(s)	36, 270, 489, 514, 531, 591, 644, 722, 985
HgaI	GACGC	3 cut(s)	407, 455, 499
HhaI	GCGC	1 cut(s)	892
Hin1I	GRCGYC	2 cut(s)	399, 447
Hin1II	CATG	1 cut(s)	586
Hin6I	GCGC	1 cut(s)	890
HinP1I	GCGC	1 cut(s)	890
HincII	GTYRAC	6 cut(s)	19, 232, 445, 454, 886, 1054
HindII	GTYRAC	6 cut(s)	19, 232, 445, 454, 886, 1054
HinfI	GANTC	8 cut(s)	111, 117, 203, 215, 329, 455, 706, 972
HpaII	CCGG	9 cut(s)	36, 270, 489, 514, 531, 591, 644, 722, 985
HphI	GGTGA	2 cut(s)	55, 925
Hpy166II	GTNNAC	8 cut(s)	19, 232, 375, 445, 454, 802, 886, 1054
Hpy188I	TCNGA	8 cut(s)	110, 116, 122, 202, 211, 328, 460, 502
Hpy188III	TCNNGA	2 cut(s)	613, 733
Hpy8I	GTNNAC	8 cut(s)	19, 232, 375, 445, 454, 802, 886, 1054
HpyAV	CCTTC	4 cut(s)	90, 321, 820, 853
HpyCH4III	ACNGT	1 cut(s)	866
HpyCH4IV	ACGT	6 cut(s)	345, 441, 558, 597, 1031, 1050
HpyCH4V	TGCA	3 cut(s)	277, 580, 802
HpyF10VI	GCNNNNNNNGC	3 cut(s)	190, 389, 398
HpyF3I	CTNAG	5 cut(s)	107, 113, 119, 407, 698
HpySE526I	ACGT	6 cut(s)	345, 441, 558, 597, 1031, 1050
Hsp92I	GRCGYC	2 cut(s)	399, 447
Hsp92II	CATG	1 cut(s)	586
HspAI	GCGC	1 cut(s)	890
Ksp22I	TGATCA	1 cut(s)	1065
Kzo9I	GATC	4 cut(s)	285, 497, 544, 1065
LguI	GCTCTTC	1 cut(s)	480
LmnI	GCTCC	6 cut(s)	412, 420, 533, 628, 766, 1036
Lsp1109I	GCAGC	3 cut(s)	258, 504, 559
LweI	GCATC	1 cut(s)	823
MaeI	CTAG	1 cut(s)	1098
MaeII	ACGT	6 cut(s)	345, 441, 558, 597, 1031, 1050
MalI	GATC	4 cut(s)	287, 499, 546, 1067
MbiI	CCGCTC	3 cut(s)	193, 254, 404
MboI	GATC	4 cut(s)	285, 497, 544, 1065
MboII	GAAGA	6 cut(s)	4, 440, 467, 829, 979, 1000
MflI	RGATCY	1 cut(s)	497
MhlI	GDGCHC	6 cut(s)	306, 417, 704, 804, 1041, 1119
MlsI	TGGCCA	1 cut(s)	686
MluCI	AATT	1 cut(s)	170
MluNI	TGGCCA	1 cut(s)	686
MlyI	GAGTC	8 cut(s)	105, 111, 197, 224, 323, 449, 700, 981
MmeI	TCCRAC	6 cut(s)	234, 351, 483, 657, 729, 792
Mox20I	TGGCCA	1 cut(s)	686
MscI	TGGCCA	1 cut(s)	686
MslI	CAYNNNNRTG	1 cut(s)	272
Msp20I	TGGCCA	1 cut(s)	686
MspI	CCGG	9 cut(s)	36, 270, 489, 514, 531, 591, 644, 722, 985
MspR9I	CCNGG	7 cut(s)	316, 370, 419, 592, 606, 644, 722
Mva1269I	GAATGC	1 cut(s)	279
MvaI	CCWGG	4 cut(s)	316, 370, 419, 606
MvnI	CGCG	4 cut(s)	438, 734, 890, 892
MwoI	GCNNNNNNNGC	3 cut(s)	190, 389, 398
NciI	CCSGG	3 cut(s)	592, 644, 722
NdeII	GATC	4 cut(s)	285, 497, 544, 1065
NlaIII	CATG	1 cut(s)	586
NlaIV	GGNNCC	7 cut(s)	268, 499, 535, 642, 719, 1038, 1116
NmeAIII	GCCGAG	3 cut(s)	379, 820, 976
NruI	TCGCGA	1 cut(s)	734
PciSI	GCTCTTC	1 cut(s)	480
PcsI	WCGNNNNNNNCGW	7 cut(s)	228, 351, 438, 447, 792, 948, 1056
PctI	GAATGC	1 cut(s)	279
Pfl23II	CGTACG	1 cut(s)	219
PflFI	GACNNNGTC	2 cut(s)	449, 557
PflMI	CCANNNNNTGG	1 cut(s)	811
PfoI	TCCNGGA	1 cut(s)	417
PkrI	GCNGC	9 cut(s)	41, 248, 266, 382, 403, 467, 519, 574, 589
PleI	GAGTC	8 cut(s)	105, 111, 197, 223, 323, 449, 700, 980
PmaCI	CACGTG	1 cut(s)	1032
PmlI	CACGTG	1 cut(s)	1032
PpsI	GAGTC	8 cut(s)	105, 111, 197, 223, 323, 449, 700, 980
Ppu21I	YACGTR	2 cut(s)	598, 1032
Psp124BI	GAGCTC	1 cut(s)	417
Psp6I	CCWGG	4 cut(s)	314, 368, 417, 604
PspCI	CACGTG	1 cut(s)	1032
PspGI	CCWGG	4 cut(s)	314, 368, 417, 604
PspLI	CGTACG	1 cut(s)	219
PspN4I	GGNNCC	7 cut(s)	268, 499, 535, 642, 719, 1038, 1116
PspPI	GGNCC	2 cut(s)	375, 640
PstNI	CAGNNNCTG	2 cut(s)	283, 369
PsuI	RGATCY	1 cut(s)	497
PsyI	GACNNNGTC	2 cut(s)	449, 557
RruI	TCGCGA	1 cut(s)	734
RsaI	GTAC	9 cut(s)	221, 281, 359, 596, 696, 791, 941, 998, 1102
RsaNI	GTAC	9 cut(s)	220, 280, 358, 595, 695, 790, 940, 997, 1101
RseI	CAYNNNNRTG	1 cut(s)	272
SacI	GAGCTC	1 cut(s)	417
SalI	GTCGAC	3 cut(s)	230, 452, 1052
SapI	GCTCTTC	1 cut(s)	480
SatI	GCNGC	9 cut(s)	40, 247, 265, 381, 402, 466, 518, 573, 588
Sau3AI	GATC	4 cut(s)	285, 497, 544, 1065
Sau96I	GGNCC	2 cut(s)	375, 640
ScaI	AGTACT	2 cut(s)	998, 1102
SchI	GAGTC	8 cut(s)	105, 111, 197, 224, 323, 449, 700, 981
ScrFI	CCNGG	7 cut(s)	316, 370, 419, 592, 606, 644, 722
SduI	GDGCHC	6 cut(s)	306, 417, 704, 804, 1041, 1119
SfaNI	GCATC	1 cut(s)	823
SinI	GGWCC	2 cut(s)	375, 640
SmiMI	CAYNNNNRTG	1 cut(s)	272
Sse9I	AATT	1 cut(s)	170
SspI	AATATT	1 cut(s)	845
SspMI	CTAG	1 cut(s)	1098
SstI	GAGCTC	1 cut(s)	417
StyD4I	CCNGG	7 cut(s)	314, 368, 417, 590, 604, 642, 720
StyI	CCWWGG	2 cut(s)	687, 711
TaaI	ACNGT	1 cut(s)	866
TaiI	ACGT	6 cut(s)	348, 444, 561, 600, 1034, 1053
TaqI	TCGA	7 cut(s)	177, 231, 453, 543, 786, 840, 1053
TasI	AATT	1 cut(s)	170
TatI	WGTACW	2 cut(s)	996, 1100
TauI	GCSGC	6 cut(s)	42, 267, 383, 404, 468, 590
TscAI	CASTG	1 cut(s)	296
TseI	GCWGC	3 cut(s)	246, 517, 572
TspDTI	ATGAA	1 cut(s)	886
TspGWI	ACGGA	4 cut(s)	136, 237, 682, 1028
TspRI	CASTG	1 cut(s)	296
Tth111I	GACNNNGTC	2 cut(s)	449, 557
Van91I	CCANNNNNTGG	1 cut(s)	811
VneI	GTGCAC	1 cut(s)	800
VpaK11BI	GGWCC	2 cut(s)	375, 640
XcmI	CCANNNNNNNNNTGG	1 cut(s)	346
XmiI	GTMKAC	3 cut(s)	231, 453, 1053
XspI	CTAG	1 cut(s)	1098
ZrmI	AGTACT	2 cut(s)	998, 1102

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.