Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004749

Physical Location & Seq

Genomic Coordinates Forward (+)

52279229 .. 52281333

Gene Structure 2105 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0376100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGTGCAGCAAAACCTTCACATTCTGCTCCCTTGTCTTCCTCATCTTCATCACTCTCAACACTGTTGCAGCTACTGCTTCATCATGCCCAATAGATCTGAGCTACGTCGAAACCTTCCCATGGGACACCTCCCTCTGCCTCGCCCCGAACGGCACACACTGCTGCCAGACCCTCCTCAGCCTCTTCGGCATAGGCCTGGCCCAACACCTCAAGCAAACCTCCATGTTCCAGCTCCCCAACTCCACCGCCTCCGCTGCTTGCCTCTCTGATTTCCAGTCCAAGCTCTCATCTTTGTCTCTCCAGCCCACCCTAGTCCCCCTCTGCTTCCAAAACTCCAGCCAGTTCGTCGCCAGCCCTGCCAGCTGTGCCGGCATCCTCTCCGTCCAGGACTGGACGGAAAAGGTGGGGGCCATCAGCGCTATAGACACATCGTGCAAGGGAGATCTGGAGGGGCTTACCAAGTGCAGCTCTTGCCTTGATGCAGGGTTGAGTGTGACTAACTTGTTGAGCGGGTTGGGCCCAAACAAAACCAAATGTTTCTACTTTACTGTGTTGTATGCTGCAGGGATTGTGAATCAGTTGGGTCCTGATGATCCAAGAACTGGGGCTTGCATTCTGGGCCTGCCTCTGTCCAAGAAGAGTTCAAGTCAGGTGAGCAGAAAGACTCTGCTGAAATGGGTGTTTGGGGTTTTGGGGGCTATTCTTGGGATTTTGCTTGCTGTTGGGGTTATAGTCATGTACAGGAGGTATGACTTGAAAGGGAGGCAAAATGCTAGGCATGAAGAGTATGTGAGTAGCTTTAGAGCTAGTTTGTTGCCTAATTCTGGTGCAAAGTGGTTTGGGATTTCGGAGCTTGAGAGAGCCACTGATGGGTTCTCTCAGAAGAACATGATAGGCCAAGGTGGGTATGGGGTTGTGTACAAGGGCACACTTGCTGATGGGACTCTTGTTGCAGTGAAGCAAATTCTTGATATGGAGTCTTTGGATTCGAAAGGGGATGAGGAGTTTTCAAATGAGGTAGAGATTATAAGCAAAATCCGGCATAGGAATCTGCTCTCGCTTAGAGGGTGTTGTGTTACTAGCGATGATTTTAAAGGGAAAAGGAGGTTCTTGGTTTATGATCTCATGTCAAATGGGAATCTGAGTGACCACTTGAGCAATAGTAATAGGAGATTGAGTTGGCCTCAGAGAAAGAGTATAATACTTGATGTTGCAAAGGGGCTTGTTTATTTGCACAATGGGATCAAGCCTGCTATTTATCACAGGGACATAAAAGGAACTAACATACTCTTGGACTCGGAAATGAAGGCGAAAGTTGCAGATTTTGGTTTGGCCAAGCAAAGTTCAGAGGGGCATACTCACTTGACAACAAGAGTTGCTGGCACTTACGGTTATTTGGCACCTGAATATGCGCTCTATGGACAGCTTACGGAGAAGAGCGATGTTTACAGCTTCGGCATTGTGATTCTTGAGATCATGAGTGGGAGGAAAGTGCTGGACACATCGAATTCCAGCACGAATTTGAATTCGGTTGTTTTGATCACGGATTGGGCGTGGATGCATACGAAAGCAGGGAGTTTGGAGGAGGTTTTTGATGAAACATTGAGGGAGGAAGGACCAAAGAGTGTTATGCAGAGGTTTGTGAATGTTGGGATTCTTTGTGCTCATGTTATGGTGGCTTTTAGGCCTACCATTTCAGAAGCACTGAGGATGTTGGAGGGTGATATTGATATTCCTGAACTACCAGATAGGCCAATGCCACTTGGGAATGAGTCTTATAGATCTTCTTTTGGGTTTTCTACCATTCTGGAAAGTGAAAGATCAAGACCCAGCTTTAGTTCAAGCACTGTAACTCCGAGTCCCCAACATAGATTGAAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF2045

Protein Analysis

627

Amino Acids

68.53

Weight (kDa)

8.03

Isoelectric Point (pI)

41.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	25 - 180	6.6e-42	SPARK
Pkinase	PF00069	293 - 568	2.1e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	294 - 570	2.5e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004749)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59520 AT1G59520 AT1G59520 AT1G59520 AT1G59520 AT1G59520
fragaria_vesca	FvH4_2g32730 FvH4_2g32730 FvH4_2g32730 FvH4_2g32730
malus_domestica	MD08G1078900.v1.1 MD15G1065900.v1.1
prunus_persica	Prupe.1G419800_v2.0.a1 Prupe.1G419800_v2.0.a1 Prupe.1G419800_v2.0.a1 Prupe.1G419800_v2.0.a1
pyrus_communis	pycom08g06530 pycom15g06230
rosa_chinensis	RchiOBHm_Chr6g0309951
rosa_laevigata	RLG00000010522
rosa_multiflora	Rmu_sc0000294.1_g000007 Rmu_sc0026843.1_g000001
rosa_roxburghii	Rroxscaffold_7G00159010
rosa_rugosa	Rorug06G0376100 Rorug06G0376200 Rorug06G0376200
rosa_samantha	Rh6AG490000 Rh6BG499400 Rh6CG504300 Rh6DG490500
rosa_wichuraiana	Rw6G042650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1028
AccB1I	GGYRCC	1 cut(s)	1399
AccB7I	CCANNNNNTGG	1 cut(s)	602
AccBSI	CCGCTC	1 cut(s)	510
AciI	CCGC	3 cut(s)	246, 252, 510
AclWI	GGATC	2 cut(s)	587, 1250
AcoI	YGGCCR	1 cut(s)	1332
AcsI	RAATTY	4 cut(s)	963, 1507, 1519, 1525
AdeI	CACNNNGTG	1 cut(s)	432
AfaI	GTAC	2 cut(s)	740, 920
AfeI	AGCGCT	1 cut(s)	418
AfiI	CCNNNNNNNGG	4 cut(s)	120, 602, 824, 870
AgsI	TTSAA	6 cut(s)	645, 757, 1011, 1525, 1842, 1876
AjnI	CCWGG	2 cut(s)	195, 384
Alw21I	GWGCWC	1 cut(s)	1666
Alw26I	GTCTC	1 cut(s)	300
AlwI	GGATC	2 cut(s)	587, 1250
AlwNI	CAGNNNCTG	1 cut(s)	74
Aor51HI	AGCGCT	1 cut(s)	418
ApaI	GGGCCC	1 cut(s)	521
ApeKI	GCWGC	6 cut(s)	6, 68, 162, 254, 465, 560
ApoI	RAATTY	4 cut(s)	963, 1507, 1519, 1525
AspLEI	GCGC	2 cut(s)	419, 1414
AspS9I	GGNCC	7 cut(s)	199, 408, 517, 518, 584, 619, 1616
AsuHPI	GGTGA	2 cut(s)	664, 1733
AsuII	TTCGAA	1 cut(s)	989
AvaII	GGWCC	2 cut(s)	584, 1616
BaeGI	GKGCMC	2 cut(s)	521, 929
BalI	TGGCCA	1 cut(s)	1334
BanI	GGYRCC	1 cut(s)	1399
BanII	GRGCYC	1 cut(s)	521
BbsI	GAAGAC	1 cut(s)	28
Bbv12I	GWGCWC	1 cut(s)	1666
BbvCI	CCTCAGC	1 cut(s)	176
BbvI	GCAGC	6 cut(s)	18, 80, 149, 241, 477, 547
BccI	CCATC	3 cut(s)	419, 863, 932
BceAI	ACGGC	1 cut(s)	166
BciT130I	CCWGG	2 cut(s)	197, 386
BclI	TGATCA	1 cut(s)	1539
BcoDI	GTCTC	1 cut(s)	300
BfaI	CTAG	4 cut(s)	311, 774, 807, 1080
BfmI	CTRYAG	2 cut(s)	420, 561
BfoI	RGCGCY	1 cut(s)	420
BglI	GCCNNNNNGGC	1 cut(s)	186
BglII	AGATCT	3 cut(s)	94, 442, 1781
BisI	GCNGC	6 cut(s)	7, 69, 163, 255, 466, 561
BlsI	GCNGC	6 cut(s)	8, 70, 164, 256, 467, 562
Bme1390I	CCNGG	2 cut(s)	197, 386
Bme18I	GGWCC	2 cut(s)	584, 1616
BmgT120I	GGNCC	7 cut(s)	199, 408, 517, 518, 584, 619, 1616
BmiI	GGNNCC	4 cut(s)	409, 519, 585, 1401
BmrFI	CCNGG	2 cut(s)	197, 386
BmrI	ACTGGG	1 cut(s)	612
BmsI	GCATC	3 cut(s)	381, 469, 1548
BmuI	ACTGGG	1 cut(s)	612
BpiI	GAAGAC	1 cut(s)	28
BplI	GAGNNNNNCTC	2 cut(s)	1168, 1200
BpmI	CTGGAG	3 cut(s)	284, 319, 467
Bpu10I	CCTNAGC	1 cut(s)	176
Bpu14I	TTCGAA	1 cut(s)	989
BpuEI	CTTGAG	4 cut(s)	194, 875, 1174, 1490
BsaJI	CCNNGG	2 cut(s)	119, 898
BsaXI	ACNNNNNCTCC	4 cut(s)	1162, 1192, 1837, 1867
Bsc4I	CCNNNNNNNGG	4 cut(s)	120, 602, 824, 870
Bse118I	RCCGGY	1 cut(s)	368
Bse1I	ACTGG	4 cut(s)	274, 340, 395, 607
BseBI	CCWGG	2 cut(s)	197, 386
BseDI	CCNNGG	2 cut(s)	119, 898
BseGI	GGATG	4 cut(s)	372, 1003, 1563, 1716
BseLI	CCNNNNNNNGG	4 cut(s)	120, 602, 824, 870
BseMII	CTCAG	6 cut(s)	89, 190, 893, 1133, 1199, 1697
BseNI	ACTGG	4 cut(s)	274, 340, 395, 607
BseRI	GAGGAG	3 cut(s)	164, 1016, 1598
BseSI	GKGCMC	2 cut(s)	521, 929
BseXI	GCAGC	6 cut(s)	18, 80, 149, 241, 477, 547
BseYI	CCCAGC	1 cut(s)	1829
BsgI	GTGCAG	2 cut(s)	25, 484
BshNI	GGYRCC	1 cut(s)	1399
BsiHKAI	GWGCWC	1 cut(s)	1666
BsiSI	CCGG	2 cut(s)	369, 1039
BslFI	GGGAC	5 cut(s)	137, 299, 955, 1280, 1845
BslI	CCNNNNNNNGG	4 cut(s)	120, 602, 824, 870
BsmAI	GTCTC	1 cut(s)	300
BsmFI	GGGAC	5 cut(s)	137, 299, 955, 1280, 1845
BsmI	GAATGC	1 cut(s)	612
Bsp119I	TTCGAA	1 cut(s)	989
Bsp120I	GGGCCC	1 cut(s)	517
Bsp1286I	GDGCHC	3 cut(s)	521, 929, 1666
Bsp1407I	TGTACA	2 cut(s)	738, 918
Bsp143I	GATC	9 cut(s)	94, 442, 592, 1120, 1242, 1473, 1539, 1781, 1820
Bsp19I	CCATGG	1 cut(s)	119
BspACI	CCGC	3 cut(s)	246, 252, 510
BspCNI	CTCAG	6 cut(s)	90, 189, 892, 1134, 1198, 1698
BspHI	TCATGA	1 cut(s)	1476
BspLI	GGNNCC	4 cut(s)	409, 519, 585, 1401
BspMAI	CTGCAG	1 cut(s)	565
BspPI	GGATC	2 cut(s)	587, 1250
BspQI	GCTCTTC	1 cut(s)	1430
BspT104I	TTCGAA	1 cut(s)	989
BspT107I	GGYRCC	1 cut(s)	1399
BsrBI	CCGCTC	1 cut(s)	510
BsrFI	RCCGGY	1 cut(s)	368
BsrGI	TGTACA	2 cut(s)	738, 918
BsrI	ACTGG	4 cut(s)	274, 340, 395, 607
BssAI	RCCGGY	1 cut(s)	368
BssECI	CCNNGG	2 cut(s)	119, 898
BssMI	GATC	9 cut(s)	94, 442, 592, 1120, 1242, 1473, 1539, 1781, 1820
BssT1I	CCWWGG	2 cut(s)	119, 898
Bst2UI	CCWGG	2 cut(s)	197, 386
Bst4CI	ACNGT	4 cut(s)	64, 550, 1391, 1849
Bst6I	CTCTTC	4 cut(s)	188, 632, 777, 1430
BstAPI	GCANNNNNTGC	3 cut(s)	74, 159, 471
BstAUI	TGTACA	2 cut(s)	738, 918
BstBI	TTCGAA	1 cut(s)	989
BstC8I	GCNNGC	9 cut(s)	259, 352, 361, 370, 610, 623, 717, 1251, 1381
BstDEI	CTNAG	7 cut(s)	98, 176, 879, 1061, 1142, 1185, 1706
BstDSI	CCRYGG	1 cut(s)	119
BstF5I	GGATG	4 cut(s)	372, 1003, 1563, 1716
BstH2I	RGCGCY	1 cut(s)	420
BstHHI	GCGC	2 cut(s)	419, 1414
BstKTI	GATC	9 cut(s)	97, 445, 595, 1123, 1245, 1476, 1542, 1784, 1823
BstMAI	GTCTC	1 cut(s)	300
BstMBI	GATC	9 cut(s)	94, 442, 592, 1120, 1242, 1473, 1539, 1781, 1820
BstNI	CCWGG	2 cut(s)	197, 386
BstSCI	CCNGG	2 cut(s)	195, 384
BstSFI	CTRYAG	2 cut(s)	420, 561
BstSLI	GKGCMC	2 cut(s)	521, 929
BstV1I	GCAGC	6 cut(s)	18, 80, 149, 241, 477, 547
BstV2I	GAAGAC	1 cut(s)	28
BstX2I	RGATCY	3 cut(s)	94, 442, 1781
BstYI	RGATCY	3 cut(s)	94, 442, 1781
BtgI	CCRYGG	1 cut(s)	119
BtgZI	GCGATG	2 cut(s)	1098, 1455
BtsCI	GGATG	4 cut(s)	372, 1003, 1563, 1716
BtsI	GCAGTG	2 cut(s)	157, 960
BtsIMutI	CAGTG	6 cut(s)	60, 157, 864, 960, 1703, 1845
Cac8I	GCNNGC	9 cut(s)	259, 352, 361, 370, 610, 623, 717, 1251, 1381
CaiI	CAGNNNCTG	1 cut(s)	74
CciI	TCATGA	1 cut(s)	1476
CfoI	GCGC	2 cut(s)	419, 1414
Cfr10I	RCCGGY	1 cut(s)	368
Cfr13I	GGNCC	7 cut(s)	199, 408, 517, 518, 584, 619, 1616
Csp6I	GTAC	2 cut(s)	739, 919
CviAII	CATG	9 cut(s)	84, 120, 223, 736, 779, 889, 1126, 1477, 1667
CviQI	GTAC	2 cut(s)	739, 919
DdeI	CTNAG	7 cut(s)	98, 176, 879, 1061, 1142, 1185, 1706
DpnI	GATC	9 cut(s)	96, 444, 594, 1122, 1244, 1475, 1541, 1783, 1822
DpnII	GATC	9 cut(s)	94, 442, 592, 1120, 1242, 1473, 1539, 1781, 1820
DraI	TTTAAA	1 cut(s)	1093
DraIII	CACNNNGTG	1 cut(s)	432
EaeI	YGGCCR	1 cut(s)	1332
Eam1104I	CTCTTC	4 cut(s)	188, 632, 777, 1430
EarI	CTCTTC	4 cut(s)	188, 632, 777, 1430
Eco130I	CCWWGG	2 cut(s)	119, 898
Eco147I	AGGCCT	2 cut(s)	195, 1687
Eco24I	GRGCYC	1 cut(s)	521
Eco47I	GGWCC	2 cut(s)	584, 1616
Eco47III	AGCGCT	1 cut(s)	418
EcoO109I	RGGNCCY	1 cut(s)	584
EcoRI	GAATTC	2 cut(s)	1507, 1525
EcoRII	CCWGG	2 cut(s)	195, 384
EcoT14I	CCWWGG	2 cut(s)	119, 898
EcoT22I	ATGCAT	1 cut(s)	1563
EcoT38I	GRGCYC	1 cut(s)	521
ErhI	CCWWGG	2 cut(s)	119, 898
FaeI	CATG	9 cut(s)	87, 123, 226, 739, 782, 892, 1129, 1480, 1670
FaqI	GGGAC	5 cut(s)	137, 299, 955, 1280, 1845
FatI	CATG	9 cut(s)	83, 119, 222, 735, 778, 888, 1125, 1476, 1666
FauI	CCCGC	1 cut(s)	503
FbaI	TGATCA	1 cut(s)	1539
Fnu4HI	GCNGC	6 cut(s)	7, 69, 163, 255, 466, 561
FokI	GGATG	4 cut(s)	359, 1010, 1570, 1723
FriOI	GRGCYC	1 cut(s)	521
Fsp4HI	GCNGC	6 cut(s)	7, 69, 163, 255, 466, 561
FspBI	CTAG	4 cut(s)	311, 774, 807, 1080
GlaI	GCGC	2 cut(s)	418, 1413
GluI	GCNGC	6 cut(s)	7, 69, 163, 255, 466, 561
GsaI	CCCAGC	1 cut(s)	1833
GsuI	CTGGAG	3 cut(s)	284, 319, 467
HaeII	RGCGCY	1 cut(s)	420
HapII	CCGG	2 cut(s)	369, 1039
HhaI	GCGC	2 cut(s)	419, 1414
Hin1II	CATG	9 cut(s)	87, 123, 226, 739, 782, 892, 1129, 1480, 1670
Hin6I	GCGC	2 cut(s)	417, 1412
HinP1I	GCGC	2 cut(s)	417, 1412
HpaII	CCGG	2 cut(s)	369, 1039
HphI	GGTGA	2 cut(s)	664, 1733
Hpy166II	GTNNAC	2 cut(s)	919, 1447
Hpy188III	TCNNGA	8 cut(s)	446, 587, 968, 1469, 1477, 1736, 1808, 1824
Hpy8I	GTNNAC	2 cut(s)	919, 1447
Hpy99I	CGWCG	2 cut(s)	110, 350
HpyAV	CCTTC	4 cut(s)	25, 124, 1300, 1607
HpyCH4III	ACNGT	4 cut(s)	64, 550, 1391, 1849
HpyCH4IV	ACGT	1 cut(s)	105
HpyF3I	CTNAG	7 cut(s)	98, 176, 879, 1061, 1142, 1185, 1706
HpySE526I	ACGT	1 cut(s)	105
Hsp92II	CATG	9 cut(s)	87, 123, 226, 739, 782, 892, 1129, 1480, 1670
HspAI	GCGC	2 cut(s)	417, 1412
KroI	GCCGGC	1 cut(s)	368
KroNI	GCCGGC	1 cut(s)	370
Ksp22I	TGATCA	1 cut(s)	1539
Kzo9I	GATC	9 cut(s)	94, 442, 592, 1120, 1242, 1473, 1539, 1781, 1820
LguI	GCTCTTC	1 cut(s)	1430
LmnI	GCTCC	3 cut(s)	32, 237, 850
Lsp1109I	GCAGC	6 cut(s)	18, 80, 149, 241, 477, 547
LweI	GCATC	3 cut(s)	381, 469, 1548
MaeI	CTAG	4 cut(s)	311, 774, 807, 1080
MaeII	ACGT	1 cut(s)	105
MaeIII	GTNAC	4 cut(s)	493, 1075, 1145, 1849
MalI	GATC	9 cut(s)	96, 444, 594, 1122, 1244, 1475, 1541, 1783, 1822
MbiI	CCGCTC	1 cut(s)	510
MboI	GATC	9 cut(s)	94, 442, 592, 1120, 1242, 1473, 1539, 1781, 1820
MboII	GAAGA	8 cut(s)	28, 37, 175, 649, 794, 895, 1447, 1776
MflI	RGATCY	3 cut(s)	94, 442, 1781
MhlI	GDGCHC	3 cut(s)	521, 929, 1666
MlsI	TGGCCA	1 cut(s)	1334
MluCI	AATT	5 cut(s)	820, 963, 1507, 1519, 1525
MluNI	TGGCCA	1 cut(s)	1334
MlyI	GAGTC	6 cut(s)	658, 937, 986, 1289, 1781, 1867
MmeI	TCCRAC	1 cut(s)	1695
Mox20I	TGGCCA	1 cut(s)	1334
Mph1103I	ATGCAT	1 cut(s)	1563
MroNI	GCCGGC	1 cut(s)	368
MscI	TGGCCA	1 cut(s)	1334
MseI	TTAA	1 cut(s)	1092
Msp20I	TGGCCA	1 cut(s)	1334
MspA1I	CMGCKG	2 cut(s)	254, 363
MspI	CCGG	2 cut(s)	369, 1039
MspR9I	CCNGG	2 cut(s)	197, 386
Mva1269I	GAATGC	1 cut(s)	612
MvaI	CCWGG	2 cut(s)	197, 386
NaeI	GCCGGC	1 cut(s)	370
NcoI	CCATGG	1 cut(s)	119
NdeII	GATC	9 cut(s)	94, 442, 592, 1120, 1242, 1473, 1539, 1781, 1820
NgoMIV	GCCGGC	1 cut(s)	368
NlaIII	CATG	9 cut(s)	87, 123, 226, 739, 782, 892, 1129, 1480, 1670
NlaIV	GGNNCC	4 cut(s)	409, 519, 585, 1401
NmuCI	GTSAC	2 cut(s)	493, 1145
NsiI	ATGCAT	1 cut(s)	1563
NspV	TTCGAA	1 cut(s)	989
PagI	TCATGA	1 cut(s)	1476
PceI	AGGCCT	2 cut(s)	195, 1687
PciSI	GCTCTTC	1 cut(s)	1430
PcsI	WCGNNNNNNNCGW	1 cut(s)	1550
PctI	GAATGC	1 cut(s)	612
PdiI	GCCGGC	1 cut(s)	370
PfeI	GAWTC	6 cut(s)	574, 986, 1048, 1138, 1465, 1654
PflMI	CCANNNNNTGG	1 cut(s)	602
PfoI	TCCNGGA	1 cut(s)	384
PkrI	GCNGC	6 cut(s)	8, 70, 164, 256, 467, 562
PleI	GAGTC	6 cut(s)	658, 937, 985, 1289, 1780, 1866
PpsI	GAGTC	6 cut(s)	658, 937, 985, 1289, 1780, 1866
PpuMI	RGGWCCY	1 cut(s)	584
PsiI	TTATAA	1 cut(s)	1028
Psp5II	RGGWCCY	1 cut(s)	584
Psp6I	CCWGG	2 cut(s)	195, 384
PspFI	CCCAGC	1 cut(s)	1829
PspGI	CCWGG	2 cut(s)	195, 384
PspN4I	GGNNCC	4 cut(s)	409, 519, 585, 1401
PspOMI	GGGCCC	1 cut(s)	517
PspPI	GGNCC	7 cut(s)	199, 408, 517, 518, 584, 619, 1616
PspPPI	RGGWCCY	1 cut(s)	584
PstI	CTGCAG	1 cut(s)	565
PstNI	CAGNNNCTG	1 cut(s)	74
PsuI	RGATCY	3 cut(s)	94, 442, 1781
PvuII	CAGCTG	1 cut(s)	363
RsaI	GTAC	2 cut(s)	740, 920
RsaNI	GTAC	2 cut(s)	739, 919
SapI	GCTCTTC	1 cut(s)	1430
SaqAI	TTAA	1 cut(s)	1092
SatI	GCNGC	6 cut(s)	7, 69, 163, 255, 466, 561
Sau3AI	GATC	9 cut(s)	94, 442, 592, 1120, 1242, 1473, 1539, 1781, 1820
Sau96I	GGNCC	7 cut(s)	199, 408, 517, 518, 584, 619, 1616
SchI	GAGTC	6 cut(s)	658, 937, 986, 1289, 1781, 1867
ScrFI	CCNGG	2 cut(s)	197, 386
SduI	GDGCHC	3 cut(s)	521, 929, 1666
SfaNI	GCATC	3 cut(s)	381, 469, 1548
SfcI	CTRYAG	2 cut(s)	420, 561
SfuI	TTCGAA	1 cut(s)	989
SinI	GGWCC	2 cut(s)	584, 1616
SmlI	CTYRAG	4 cut(s)	209, 854, 1153, 1469
SmoI	CTYRAG	4 cut(s)	209, 854, 1153, 1469
Sse9I	AATT	5 cut(s)	820, 963, 1507, 1519, 1525
SseBI	AGGCCT	2 cut(s)	195, 1687
SsiI	CCGC	3 cut(s)	246, 252, 510
SspMI	CTAG	4 cut(s)	311, 774, 807, 1080
StuI	AGGCCT	2 cut(s)	195, 1687
StyD4I	CCNGG	2 cut(s)	195, 384
StyI	CCWWGG	2 cut(s)	119, 898
TaaI	ACNGT	4 cut(s)	64, 550, 1391, 1849
TaiI	ACGT	1 cut(s)	108
TaqI	TCGA	3 cut(s)	108, 989, 1505
TasI	AATT	5 cut(s)	820, 963, 1507, 1519, 1525
TatI	WGTACW	2 cut(s)	738, 918
TfiI	GAWTC	6 cut(s)	574, 986, 1048, 1138, 1465, 1654
Tru1I	TTAA	1 cut(s)	1092
Tru9I	TTAA	1 cut(s)	1092
TscAI	CASTG	6 cut(s)	67, 164, 871, 960, 1710, 1852
TseFI	GTSAC	2 cut(s)	493, 1145
TseI	GCWGC	6 cut(s)	6, 68, 162, 254, 465, 560
Tsp45I	GTSAC	2 cut(s)	493, 1145
TspDTI	ATGAA	5 cut(s)	37, 69, 795, 1319, 1611
TspGWI	ACGGA	4 cut(s)	370, 410, 1445, 1559
TspRI	CASTG	6 cut(s)	67, 164, 871, 960, 1710, 1852
Van91I	CCANNNNNTGG	1 cut(s)	602
VpaK11BI	GGWCC	2 cut(s)	584, 1616
XapI	RAATTY	4 cut(s)	963, 1507, 1519, 1525
XcmI	CCANNNNNNNNNTGG	1 cut(s)	905
XspI	CTAG	4 cut(s)	311, 774, 807, 1080
Zsp2I	ATGCAT	1 cut(s)	1563

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.